RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 ZNF73O43830 326 aaPredicted RBP5.76□□□□□ -1.49
CCDC40-214ENST00000575431 SLC25A34Q6PIV7 304 aa5.76□□□□□ -1.49
CCDC40-214ENST00000575431 C14orf144Q96I85 54 aa5.76□□□□□ -1.49
CCDC40-214ENST00000575431 HIGD1BQ9P298 99 aa5.76□□□□□ -1.49
CCDC40-214ENST00000575431 VPS13BQ7Z7G8 4022 aa5.75□□□□□ -1.49
CCDC40-214ENST00000575431 TRAV13-2A0A0B4J235 113 aa5.75□□□□□ -1.49
CCDC40-214ENST00000575431 KRTAP1-4P0C5Y4 121 aa5.75□□□□□ -1.49
CCDC40-214ENST00000575431 RPL13AP40429 203 aaKnown RBP5.75□□□□□ -1.49
CCDC40-214ENST00000575431 HIST1H4GQ99525 98 aa5.75□□□□□ -1.49
CCDC40-214ENST00000575431 HIGD2AQ9BW72 106 aa5.75□□□□□ -1.49
CCDC40-214ENST00000575431 ZNF706Q9Y5V0 76 aaPredicted RBP5.75□□□□□ -1.49
CCDC40-214ENST00000575431 A6NDN8 102 aa5.74□□□□□ -1.49
CCDC40-214ENST00000575431 B5MCH6 92 aa5.74□□□□□ -1.49
CCDC40-214ENST00000575431 MT1HL1P0DM35 61 aa5.74□□□□□ -1.49
CCDC40-214ENST00000575431 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
CCDC40-214ENST00000575431 Q6ZRX8 168 aa5.74□□□□□ -1.49
CCDC40-214ENST00000575431 TAL2Q16559 108 aa5.73□□□□□ -1.49
CCDC40-214ENST00000575431 FAM229BQ4G0N7 80 aa5.73□□□□□ -1.49
CCDC40-214ENST00000575431 TRBV7-6A0A0J9YX20 115 aa5.72□□□□□ -1.49
CCDC40-214ENST00000575431 A4D1N5 150 aa5.72□□□□□ -1.49
CCDC40-214ENST00000575431 CRYGAP11844 174 aa5.72□□□□□ -1.49
CCDC40-214ENST00000575431 SMCR5Q8TEV8 140 aa5.72□□□□□ -1.49
CCDC40-214ENST00000575431 C6orf99Q4VX62 202 aa5.71□□□□□ -1.5
CCDC40-214ENST00000575431 PRR26Q8N8Z3 221 aa5.71□□□□□ -1.5
CCDC40-214ENST00000575431 C2orf91Q6ZV80 131 aa5.7□□□□□ -1.5
CCDC40-214ENST00000575431 SPRR4Q96PI1 79 aa5.7□□□□□ -1.5
CCDC40-214ENST00000575431 DHRS4-AS1Q9P1J3 65 aa5.7□□□□□ -1.5
CCDC40-214ENST00000575431 TMEM238LA0A1B0GVL6 79 aa5.69□□□□□ -1.5
CCDC40-214ENST00000575431 A0A1B0GWB2 263 aa5.69□□□□□ -1.5
CCDC40-214ENST00000575431 A6NJY4 79 aa5.69□□□□□ -1.5
CCDC40-214ENST00000575431 COX7BP24311 80 aa5.69□□□□□ -1.5
CCDC40-214ENST00000575431 ELOF1P60002 83 aaKnown RBP5.69□□□□□ -1.5
CCDC40-214ENST00000575431 VAMP3Q15836 100 aa5.69□□□□□ -1.5
CCDC40-214ENST00000575431 UQCR10Q9UDW1 63 aa5.69□□□□□ -1.5
CCDC40-214ENST00000575431 SMIM6P0DI80 62 aa5.68□□□□□ -1.5
CCDC40-214ENST00000575431 Q9BRP9 147 aa5.68□□□□□ -1.5
CCDC40-214ENST00000575431 HSD52Q0P140 79 aa5.67□□□□□ -1.5
CCDC40-214ENST00000575431 CEND1Q8N111 149 aa5.67□□□□□ -1.5
CCDC40-214ENST00000575431 TYMSOSQ8TAI1 123 aa5.67□□□□□ -1.5
CCDC40-214ENST00000575431 SMIM11BQ8TCY0 68 aa5.67□□□□□ -1.5
CCDC40-214ENST00000575431 RAB37Q96AX2 223 aa5.67□□□□□ -1.5
CCDC40-214ENST00000575431 NHP2Q9NX24 153 aaKnown RBP5.67□□□□□ -1.5
CCDC40-214ENST00000575431 A0A087X002 238 aa5.66□□□□□ -1.5
CCDC40-214ENST00000575431 A0A0B4J2C4 111 aa5.66□□□□□ -1.5
CCDC40-214ENST00000575431 ERC2-IT1O76042 136 aa5.66□□□□□ -1.5
CCDC40-214ENST00000575431 LINC00483Q53H64 154 aa5.66□□□□□ -1.5
CCDC40-214ENST00000575431 DMBT1Q9UGM3 2413 aaPredicted RBP5.66□□□□□ -1.5
CCDC40-214ENST00000575431 SLC25A20O43772 301 aa5.65□□□□□ -1.5
CCDC40-214ENST00000575431 CFC1BP0CG36 223 aa5.65□□□□□ -1.5
CCDC40-214ENST00000575431 CFC1P0CG37 223 aa5.65□□□□□ -1.5
CCDC40-214ENST00000575431 GAGE2AQ6NT46 116 aa5.65□□□□□ -1.5
CCDC40-214ENST00000575431 ANAPC11Q9NYG5 84 aa5.65□□□□□ -1.5
CCDC40-214ENST00000575431 PKHD1L1Q86WI1 4243 aa5.65□□□□□ -1.51
CCDC40-214ENST00000575431 MYCBP2O75592 4640 aa5.65□□□□□ -1.51
CCDC40-214ENST00000575431 CTAG1AP78358 180 aa5.64□□□□□ -1.51
CCDC40-214ENST00000575431 BVES-AS1Q5T3Y7 98 aa5.64□□□□□ -1.51
CCDC40-214ENST00000575431 C12orf57Q99622 126 aa5.64□□□□□ -1.51
CCDC40-214ENST00000575431 SPRR1BP22528 89 aa5.63□□□□□ -1.51
CCDC40-214ENST00000575431 KRTAP13-2Q52LG2 175 aa5.63□□□□□ -1.51
CCDC40-214ENST00000575431 PRO1854Q9UHT4 67 aa5.63□□□□□ -1.51
CCDC40-214ENST00000575431 LRP1Q07954 4544 aaKnown RBP5.62□□□□□ -1.51
CCDC40-214ENST00000575431 SNCGO76070 127 aa5.62□□□□□ -1.51
CCDC40-214ENST00000575431 TEX49A0A1B0GTD5 131 aa5.61□□□□□ -1.51
CCDC40-214ENST00000575431 LOC105371267A0A1B0GV96 52 aa5.61□□□□□ -1.51
CCDC40-214ENST00000575431 H0YGX0 51 aa5.61□□□□□ -1.51
CCDC40-214ENST00000575431 FXYD2P54710 66 aa5.61□□□□□ -1.51
CCDC40-214ENST00000575431 SPAG11AQ6PDA7 123 aa5.61□□□□□ -1.51
CCDC40-214ENST00000575431 LINC00575Q6W349 94 aa5.61□□□□□ -1.51
CCDC40-214ENST00000575431 SSBP3-AS1Q7Z2R9 100 aa5.61□□□□□ -1.51
CCDC40-214ENST00000575431 ST20-AS1Q8NBB2 130 aa5.61□□□□□ -1.51
CCDC40-214ENST00000575431 FAT3Q8TDW7 4589 aa5.61□□□□□ -1.51
CCDC40-214ENST00000575431 H7C2G1 150 aa5.6□□□□□ -1.51
CCDC40-214ENST00000575431 Q1RN00 199 aa5.6□□□□□ -1.51
CCDC40-214ENST00000575431 C4orf48Q5BLP8 95 aa5.6□□□□□ -1.51
CCDC40-214ENST00000575431 LINC00304Q8N9R0 145 aa5.6□□□□□ -1.51
CCDC40-214ENST00000575431 LAMTOR3Q9UHA4 124 aa5.6□□□□□ -1.51
CCDC40-214ENST00000575431 IGLV5-48A0A075B6I7 105 aa5.59□□□□□ -1.51
CCDC40-214ENST00000575431 hADV29S1A0JD25 119 aa5.59□□□□□ -1.51
CCDC40-214ENST00000575431 TSTD3H0UI37 97 aa5.59□□□□□ -1.51
CCDC40-214ENST00000575431 C3orf22Q8N5N4 141 aa5.59□□□□□ -1.51
CCDC40-214ENST00000575431 PRO1933Q9H354 126 aa5.59□□□□□ -1.51
CCDC40-214ENST00000575431 M0R143 59 aa5.58□□□□□ -1.52
CCDC40-214ENST00000575431 IGLV9-49A0A0B4J1Y8 123 aa5.57□□□□□ -1.52
CCDC40-214ENST00000575431 A0A1B0GX51 115 aa5.57□□□□□ -1.52
CCDC40-214ENST00000575431 GHRHP01286 108 aa5.57□□□□□ -1.52
CCDC40-214ENST00000575431 MOBPQ13875 183 aa5.57□□□□□ -1.52
CCDC40-214ENST00000575431 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.57□□□□□ -1.52
CCDC40-214ENST00000575431 Q8NBF4 154 aa5.57□□□□□ -1.52
CCDC40-214ENST00000575431 DEFB105AQ8NG35 78 aa5.57□□□□□ -1.52
CCDC40-214ENST00000575431 SPINK1P00995 79 aa5.56□□□□□ -1.52
CCDC40-214ENST00000575431 COX6CP09669 75 aa5.56□□□□□ -1.52
CCDC40-214ENST00000575431 OCIAD2Q56VL3 154 aa5.56□□□□□ -1.52
CCDC40-214ENST00000575431 C9orf153Q5TBE3 101 aa5.56□□□□□ -1.52
CCDC40-214ENST00000575431 PPDPFLQ8WWR9 84 aa5.56□□□□□ -1.52
CCDC40-214ENST00000575431 TSPAN13O95857 204 aa5.55□□□□□ -1.52
CCDC40-214ENST00000575431 Q6ZQY7 126 aa5.55□□□□□ -1.52
CCDC40-214ENST00000575431 PSMB2P49721 201 aa5.54□□□□□ -1.52
CCDC40-214ENST00000575431 LINC01547P58512 204 aaPredicted RBP5.54□□□□□ -1.52
CCDC40-214ENST00000575431 RPS29P62273 56 aaKnown RBP5.54□□□□□ -1.52
CCDC40-214ENST00000575431 Q8N377 158 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms