RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 NPC2P61916 151 aa12.09□□□□□ -0.47
SPNS3-203ENST00000575185 SPATA45Q537H7 98 aa12.09□□□□□ -0.47
SPNS3-203ENST00000575185 PAM16Q9Y3D7 125 aa12.09□□□□□ -0.47
SPNS3-203ENST00000575185 PYY3Q5JQD4 70 aa12.08□□□□□ -0.48
SPNS3-203ENST00000575185 SOSTDC1Q6X4U4 206 aa12.08□□□□□ -0.48
SPNS3-203ENST00000575185 IGKV2-28A0A075B6P5 120 aa12.07□□□□□ -0.48
SPNS3-203ENST00000575185 DLEU1O43261 78 aa12.07□□□□□ -0.48
SPNS3-203ENST00000575185 IGKV2D-28P01615 120 aa12.07□□□□□ -0.48
SPNS3-203ENST00000575185 KRTAP13-2Q52LG2 175 aa12.07□□□□□ -0.48
SPNS3-203ENST00000575185 BCE1O60756 84 aa12.06□□□□□ -0.48
SPNS3-203ENST00000575185 CBY1Q9Y3M2 126 aa12.06□□□□□ -0.48
SPNS3-203ENST00000575185 RPL28P46779 137 aaKnown RBP12.05□□□□□ -0.48
SPNS3-203ENST00000575185 CDIP1Q9H305 208 aa12.05□□□□□ -0.48
SPNS3-203ENST00000575185 LINC00518Q8N0U6 118 aa12.04□□□□□ -0.48
SPNS3-203ENST00000575185 PRYO14603 147 aa12.03□□□□□ -0.48
SPNS3-203ENST00000575185 S100A7L2Q5SY68 101 aa12.03□□□□□ -0.48
SPNS3-203ENST00000575185 DDTP30046 118 aa12.02□□□□□ -0.49
SPNS3-203ENST00000575185 TPRXLQ17RH7 258 aa12.02□□□□□ -0.49
SPNS3-203ENST00000575185 SLC25A34Q6PIV7 304 aa12.02□□□□□ -0.49
SPNS3-203ENST00000575185 TMEM126AQ9H061 195 aa12.02□□□□□ -0.49
SPNS3-203ENST00000575185 EIF4EBP3O60516 100 aaPredicted RBP12.01□□□□□ -0.49
SPNS3-203ENST00000575185 KCNQ1DNQ9H478 68 aa12.01□□□□□ -0.49
SPNS3-203ENST00000575185 FSIP2Q5CZC0 6907 aa12.01□□□□□ -0.49
SPNS3-203ENST00000575185 TRBV10-3A0A0K0K1G6 114 aa12□□□□□ -0.49
SPNS3-203ENST00000575185 UBE2AP49459 152 aa12□□□□□ -0.49
SPNS3-203ENST00000575185 C14orf144Q96I85 54 aa12□□□□□ -0.49
SPNS3-203ENST00000575185 MUSTN1Q8IVN3 82 aa11.99□□□□□ -0.49
SPNS3-203ENST00000575185 LINC00304Q8N9R0 145 aa11.99□□□□□ -0.49
SPNS3-203ENST00000575185 IGLV7-46A0A075B6I9 117 aa11.98□□□□□ -0.49
SPNS3-203ENST00000575185 HIGD1BQ9P298 99 aa11.98□□□□□ -0.49
SPNS3-203ENST00000575185 IGLV6-57P01721 117 aa11.97□□□□□ -0.49
SPNS3-203ENST00000575185 FAM19A1Q7Z5A9 133 aa11.97□□□□□ -0.49
SPNS3-203ENST00000575185 OR13C6PQ8NH95 151 aa11.96□□□□□ -0.49
SPNS3-203ENST00000575185 HIST1H4GQ99525 98 aa11.96□□□□□ -0.49
SPNS3-203ENST00000575185 KRTAP13-1Q8IUC0 172 aa11.95□□□□□ -0.5
SPNS3-203ENST00000575185 LINC00337Q8N6G1 96 aa11.95□□□□□ -0.5
SPNS3-203ENST00000575185 SPRR1AP35321 89 aa11.94□□□□□ -0.5
SPNS3-203ENST00000575185 TRAV23DV6A0A075B6W5 121 aa11.93□□□□□ -0.5
SPNS3-203ENST00000575185 ETDCA0A1B0GVM5 59 aa11.93□□□□□ -0.5
SPNS3-203ENST00000575185 TRAV13-2A0A0B4J235 113 aa11.91□□□□□ -0.5
SPNS3-203ENST00000575185 SMIM6P0DI80 62 aa11.91□□□□□ -0.5
SPNS3-203ENST00000575185 HINT1P49773 126 aaPredicted RBP11.91□□□□□ -0.5
SPNS3-203ENST00000575185 FAM229BQ4G0N7 80 aa11.91□□□□□ -0.5
SPNS3-203ENST00000575185 TAL2Q16559 108 aa11.9□□□□□ -0.5
SPNS3-203ENST00000575185 PRLHP81277 87 aa11.89□□□□□ -0.51
SPNS3-203ENST00000575185 A4D1N5 150 aa11.88□□□□□ -0.51
SPNS3-203ENST00000575185 A6NDN8 102 aa11.88□□□□□ -0.51
SPNS3-203ENST00000575185 ZNF73O43830 326 aaPredicted RBP11.88□□□□□ -0.51
SPNS3-203ENST00000575185 C2orf91Q6ZV80 131 aa11.88□□□□□ -0.51
SPNS3-203ENST00000575185 UQCR10Q9UDW1 63 aa11.88□□□□□ -0.51
SPNS3-203ENST00000575185 KRTAP4-16G5E9R7 235 aaPredicted RBP11.87□□□□□ -0.51
SPNS3-203ENST00000575185 LCE2DQ5TA82 110 aaPredicted RBP11.87□□□□□ -0.51
SPNS3-203ENST00000575185 HIGD2AQ9BW72 106 aa11.85□□□□□ -0.51
SPNS3-203ENST00000575185 B5MCH6 92 aa11.84□□□□□ -0.51
SPNS3-203ENST00000575185 CRCT1Q9UGL9 99 aa11.84□□□□□ -0.51
SPNS3-203ENST00000575185 TMEM238LA0A1B0GVL6 79 aa11.83□□□□□ -0.52
SPNS3-203ENST00000575185 A6NJY4 79 aa11.83□□□□□ -0.52
SPNS3-203ENST00000575185 Q6ZRX8 168 aa11.83□□□□□ -0.52
SPNS3-203ENST00000575185 C3orf22Q8N5N4 141 aa11.83□□□□□ -0.52
SPNS3-203ENST00000575185 LOC105371267A0A1B0GV96 52 aa11.82□□□□□ -0.52
SPNS3-203ENST00000575185 CEND1Q8N111 149 aa11.82□□□□□ -0.52
SPNS3-203ENST00000575185 KRTAP4-1Q9BYQ7 146 aa11.82□□□□□ -0.52
SPNS3-203ENST00000575185 ZNF706Q9Y5V0 76 aaPredicted RBP11.82□□□□□ -0.52
SPNS3-203ENST00000575185 LINC01547P58512 204 aaPredicted RBP11.8□□□□□ -0.52
SPNS3-203ENST00000575185 HSD52Q0P140 79 aa11.8□□□□□ -0.52
SPNS3-203ENST00000575185 TRBV7-6A0A0J9YX20 115 aa11.79□□□□□ -0.52
SPNS3-203ENST00000575185 C6orf99Q4VX62 202 aa11.79□□□□□ -0.52
SPNS3-203ENST00000575185 RAB37Q96AX2 223 aa11.78□□□□□ -0.52
SPNS3-203ENST00000575185 A0A0B4J2C4 111 aa11.77□□□□□ -0.53
SPNS3-203ENST00000575185 COX7BP24311 80 aa11.77□□□□□ -0.53
SPNS3-203ENST00000575185 CTAG1AP78358 180 aa11.77□□□□□ -0.53
SPNS3-203ENST00000575185 SMCR5Q8TEV8 140 aa11.77□□□□□ -0.53
SPNS3-203ENST00000575185 A0A1B0GWB2 263 aa11.76□□□□□ -0.53
SPNS3-203ENST00000575185 C12orf57Q99622 126 aa11.76□□□□□ -0.53
SPNS3-203ENST00000575185 DHRS4-AS1Q9P1J3 65 aa11.76□□□□□ -0.53
SPNS3-203ENST00000575185 ELOF1P60002 83 aaKnown RBP11.75□□□□□ -0.53
SPNS3-203ENST00000575185 VAMP3Q15836 100 aa11.75□□□□□ -0.53
SPNS3-203ENST00000575185 KRTAP13-3Q3SY46 172 aa11.75□□□□□ -0.53
SPNS3-203ENST00000575185 ASB16-AS1Q495Z4 193 aa11.75□□□□□ -0.53
SPNS3-203ENST00000575185 SMIM11BQ8TCY0 68 aa11.75□□□□□ -0.53
SPNS3-203ENST00000575185 CFC1BP0CG36 223 aa11.73□□□□□ -0.53
SPNS3-203ENST00000575185 CFC1P0CG37 223 aa11.73□□□□□ -0.53
SPNS3-203ENST00000575185 Q9BRP9 147 aa11.73□□□□□ -0.53
SPNS3-203ENST00000575185 FP248Q71RG6 208 aaPredicted RBP11.72□□□□□ -0.53
SPNS3-203ENST00000575185 SPRR4Q96PI1 79 aa11.72□□□□□ -0.53
SPNS3-203ENST00000575185 PRO1933Q9H354 126 aa11.72□□□□□ -0.53
SPNS3-203ENST00000575185 TSTD3H0UI37 97 aa11.71□□□□□ -0.53
SPNS3-203ENST00000575185 NHP2Q9NX24 153 aaKnown RBP11.71□□□□□ -0.53
SPNS3-203ENST00000575185 FXYD2P54710 66 aa11.7□□□□□ -0.54
SPNS3-203ENST00000575185 PRO1854Q9UHT4 67 aa11.69□□□□□ -0.54
SPNS3-203ENST00000575185 BVES-AS1Q5T3Y7 98 aa11.68□□□□□ -0.54
SPNS3-203ENST00000575185 SPAG11AQ6PDA7 123 aa11.68□□□□□ -0.54
SPNS3-203ENST00000575185 SLC25A20O43772 301 aa11.67□□□□□ -0.54
SPNS3-203ENST00000575185 ERC2-IT1O76042 136 aa11.67□□□□□ -0.54
SPNS3-203ENST00000575185 H7C2G1 150 aa11.65□□□□□ -0.54
SPNS3-203ENST00000575185 Q1RN00 199 aa11.65□□□□□ -0.54
SPNS3-203ENST00000575185 LINC00483Q53H64 154 aa11.65□□□□□ -0.54
SPNS3-203ENST00000575185 M0R143 59 aa11.64□□□□□ -0.55
SPNS3-203ENST00000575185 GAGE2AQ6NT46 116 aa11.64□□□□□ -0.55
SPNS3-203ENST00000575185 Q8NBF4 154 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms