RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 PCP2Q8IVA1 136 aa5.04□□□□□ -1.6
SMG6-216ENST00000575176 C3orf22Q8N5N4 141 aa5.04□□□□□ -1.6
SMG6-216ENST00000575176 CRYGAP11844 174 aa5.03□□□□□ -1.6
SMG6-216ENST00000575176 DDTP30046 118 aa5.03□□□□□ -1.6
SMG6-216ENST00000575176 SPANXDQ9BXN6 97 aa5.03□□□□□ -1.6
SMG6-216ENST00000575176 SPANXCQ9NY87 97 aa5.03□□□□□ -1.6
SMG6-216ENST00000575176 Q6ZRX8 168 aa5.02□□□□□ -1.61
SMG6-216ENST00000575176 HIGD2AQ9BW72 106 aa5.02□□□□□ -1.61
SMG6-216ENST00000575176 PPDPFQ9H3Y8 114 aa5.02□□□□□ -1.61
SMG6-216ENST00000575176 C5orf52A6NGY3 159 aa5.01□□□□□ -1.61
SMG6-216ENST00000575176 TRAV23DV6A0A075B6W5 121 aa5□□□□□ -1.61
SMG6-216ENST00000575176 TYMSOSQ8TAI1 123 aa5□□□□□ -1.61
SMG6-216ENST00000575176 C20orf202A1L168 122 aa4.99□□□□□ -1.61
SMG6-216ENST00000575176 ZNF73O43830 326 aaPredicted RBP4.99□□□□□ -1.61
SMG6-216ENST00000575176 ETDCA0A1B0GVM5 59 aa4.98□□□□□ -1.61
SMG6-216ENST00000575176 SNRPEP62304 92 aaKnown RBP4.98□□□□□ -1.61
SMG6-216ENST00000575176 MIEN1Q9BRT3 115 aa4.98□□□□□ -1.61
SMG6-216ENST00000575176 PCP4L1A6NKN8 68 aa4.97□□□□□ -1.61
SMG6-216ENST00000575176 LINC00304Q8N9R0 145 aa4.97□□□□□ -1.61
SMG6-216ENST00000575176 ELOF1P60002 83 aaKnown RBP4.96□□□□□ -1.62
SMG6-216ENST00000575176 ST20-AS1Q8NBB2 130 aa4.96□□□□□ -1.62
SMG6-216ENST00000575176 TSPAN13O95857 204 aa4.95□□□□□ -1.62
SMG6-216ENST00000575176 SPRR1BP22528 89 aa4.95□□□□□ -1.62
SMG6-216ENST00000575176 S100A7L2Q5SY68 101 aa4.95□□□□□ -1.62
SMG6-216ENST00000575176 C12orf57Q99622 126 aa4.95□□□□□ -1.62
SMG6-216ENST00000575176 RETNLBQ9BQ08 111 aa4.95□□□□□ -1.62
SMG6-216ENST00000575176 ZNF706Q9Y5V0 76 aaPredicted RBP4.95□□□□□ -1.62
SMG6-216ENST00000575176 S100A6P06703 90 aa4.94□□□□□ -1.62
SMG6-216ENST00000575176 IFITM1P13164 125 aa4.94□□□□□ -1.62
SMG6-216ENST00000575176 AKR1D1P51857 326 aa4.94□□□□□ -1.62
SMG6-216ENST00000575176 LINC01547P58512 204 aaPredicted RBP4.94□□□□□ -1.62
SMG6-216ENST00000575176 SCGB1D4Q6XE38 83 aa4.94□□□□□ -1.62
SMG6-216ENST00000575176 Q6ZVH6 145 aa4.94□□□□□ -1.62
SMG6-216ENST00000575176 MUSTN1Q8IVN3 82 aa4.94□□□□□ -1.62
SMG6-216ENST00000575176 S100A2P29034 98 aa4.93□□□□□ -1.62
SMG6-216ENST00000575176 C6orf99Q4VX62 202 aa4.93□□□□□ -1.62
SMG6-216ENST00000575176 Q8NBF4 154 aa4.93□□□□□ -1.62
SMG6-216ENST00000575176 GAGE2AQ6NT46 116 aa4.92□□□□□ -1.62
SMG6-216ENST00000575176 FAT4Q6V0I7 4981 aa4.91□□□□□ -1.62
SMG6-216ENST00000575176 TRBV7-6A0A0J9YX20 115 aa4.91□□□□□ -1.62
SMG6-216ENST00000575176 COX8AP10176 69 aa4.91□□□□□ -1.62
SMG6-216ENST00000575176 MOBPQ13875 183 aa4.91□□□□□ -1.62
SMG6-216ENST00000575176 PRR4Q16378 134 aa4.91□□□□□ -1.62
SMG6-216ENST00000575176 C2orf91Q6ZV80 131 aa4.91□□□□□ -1.62
SMG6-216ENST00000575176 SMIM29Q86T20 159 aa4.91□□□□□ -1.62
SMG6-216ENST00000575176 IGLV5-48A0A075B6I7 105 aa4.9□□□□□ -1.63
SMG6-216ENST00000575176 DLEU1O43261 78 aa4.9□□□□□ -1.63
SMG6-216ENST00000575176 TPRXLQ17RH7 258 aa4.9□□□□□ -1.63
SMG6-216ENST00000575176 OR13C6PQ8NH95 151 aa4.9□□□□□ -1.63
SMG6-216ENST00000575176 SMIM11BQ8TCY0 68 aa4.9□□□□□ -1.63
SMG6-216ENST00000575176 A4D1N5 150 aa4.89□□□□□ -1.63
SMG6-216ENST00000575176 SMIM6P0DI80 62 aa4.89□□□□□ -1.63
SMG6-216ENST00000575176 COX7BP24311 80 aa4.89□□□□□ -1.63
SMG6-216ENST00000575176 RPS29P62273 56 aaKnown RBP4.89□□□□□ -1.63
SMG6-216ENST00000575176 JOSD1Q15040 202 aaPredicted RBP4.89□□□□□ -1.63
SMG6-216ENST00000575176 Q8N377 158 aa4.89□□□□□ -1.63
SMG6-216ENST00000575176 IGLV9-49A0A0B4J1Y8 123 aa4.88□□□□□ -1.63
SMG6-216ENST00000575176 SCGB1D1O95968 90 aa4.88□□□□□ -1.63
SMG6-216ENST00000575176 SPAG11AQ6PDA7 123 aa4.88□□□□□ -1.63
SMG6-216ENST00000575176 DHRS4-AS1Q9P1J3 65 aa4.88□□□□□ -1.63
SMG6-216ENST00000575176 A0A1B0GWB2 263 aa4.87□□□□□ -1.63
SMG6-216ENST00000575176 KRTAP13-3Q3SY46 172 aa4.87□□□□□ -1.63
SMG6-216ENST00000575176 PYY3Q5JQD4 70 aa4.87□□□□□ -1.63
SMG6-216ENST00000575176 SSBP3-AS1Q7Z2R9 100 aa4.87□□□□□ -1.63
SMG6-216ENST00000575176 CBY1Q9Y3M2 126 aa4.87□□□□□ -1.63
SMG6-216ENST00000575176 SPINK1P00995 79 aa4.86□□□□□ -1.63
SMG6-216ENST00000575176 COPS9Q8WXC6 57 aa4.86□□□□□ -1.63
SMG6-216ENST00000575176 HIGD1BQ9P298 99 aa4.86□□□□□ -1.63
SMG6-216ENST00000575176 PAM16Q9Y3D7 125 aa4.86□□□□□ -1.63
SMG6-216ENST00000575176 TRAV13-2A0A0B4J235 113 aa4.85□□□□□ -1.63
SMG6-216ENST00000575176 A6NDN8 102 aa4.85□□□□□ -1.63
SMG6-216ENST00000575176 HSBP1L1C9JCN9 74 aa4.85□□□□□ -1.63
SMG6-216ENST00000575176 SPATA45Q537H7 98 aa4.85□□□□□ -1.63
SMG6-216ENST00000575176 FP248Q71RG6 208 aaPredicted RBP4.85□□□□□ -1.63
SMG6-216ENST00000575176 C14orf144Q96I85 54 aa4.85□□□□□ -1.63
SMG6-216ENST00000575176 IGLV7-46A0A075B6I9 117 aa4.84□□□□□ -1.63
SMG6-216ENST00000575176 CFC1BP0CG36 223 aa4.83□□□□□ -1.64
SMG6-216ENST00000575176 CFC1P0CG37 223 aa4.83□□□□□ -1.64
SMG6-216ENST00000575176 LINC00575Q6W349 94 aa4.83□□□□□ -1.64
SMG6-216ENST00000575176 A0A0G2JQZ4 141 aa4.82□□□□□ -1.64
SMG6-216ENST00000575176 TEX49A0A1B0GTD5 131 aa4.82□□□□□ -1.64
SMG6-216ENST00000575176 HINT1P49773 126 aaPredicted RBP4.82□□□□□ -1.64
SMG6-216ENST00000575176 Q1RN00 199 aa4.82□□□□□ -1.64
SMG6-216ENST00000575176 C9orf153Q5TBE3 101 aa4.82□□□□□ -1.64
SMG6-216ENST00000575176 VAMP8Q9BV40 100 aa4.82□□□□□ -1.64
SMG6-216ENST00000575176 A0A0B4J2C4 111 aa4.81□□□□□ -1.64
SMG6-216ENST00000575176 FXYD2P54710 66 aa4.81□□□□□ -1.64
SMG6-216ENST00000575176 HIST1H4GQ99525 98 aa4.81□□□□□ -1.64
SMG6-216ENST00000575176 KRTAP4-1Q9BYQ7 146 aa4.81□□□□□ -1.64
SMG6-216ENST00000575176 SLC25A34Q6PIV7 304 aa4.8□□□□□ -1.64
SMG6-216ENST00000575176 FAM218AQ96MZ4 157 aa4.8□□□□□ -1.64
SMG6-216ENST00000575176 IGLV8-61A0A075B6I0 122 aa4.79□□□□□ -1.64
SMG6-216ENST00000575176 CD164Q04900 197 aa4.79□□□□□ -1.64
SMG6-216ENST00000575176 Q5XG85 94 aa4.79□□□□□ -1.64
SMG6-216ENST00000575176 Q6ZQY7 126 aa4.79□□□□□ -1.64
SMG6-216ENST00000575176 SLC25A20O43772 301 aa4.78□□□□□ -1.64
SMG6-216ENST00000575176 TAL2Q16559 108 aa4.78□□□□□ -1.64
SMG6-216ENST00000575176 C4orf48Q5BLP8 95 aa4.78□□□□□ -1.64
SMG6-216ENST00000575176 LCE2AQ5TA79 106 aaPredicted RBP4.78□□□□□ -1.64
SMG6-216ENST00000575176 CEND1Q8N111 149 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms