RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 FUSP35637 526 aaKnown RBP eCLIP5.72□□□□□ -1.49
RPAIN-215ENST00000575112 COL7A1Q02388 2944 aa5.72□□□□□ -1.49
RPAIN-215ENST00000575112 PRR4Q16378 134 aa5.72□□□□□ -1.49
RPAIN-215ENST00000575112 SYCNQ0VAF6 134 aa5.72□□□□□ -1.49
RPAIN-215ENST00000575112 RPS28P62857 69 aaKnown RBP5.72□□□□□ -1.49
RPAIN-215ENST00000575112 LYSTQ99698 3801 aa5.71□□□□□ -1.49
RPAIN-215ENST00000575112 LINC00474Q9P2X8 69 aa5.71□□□□□ -1.5
RPAIN-215ENST00000575112 A0A0G2JQZ4 141 aa5.71□□□□□ -1.5
RPAIN-215ENST00000575112 A0A1W2PNN7 141 aa5.71□□□□□ -1.5
RPAIN-215ENST00000575112 H7BZZ5 65 aa5.71□□□□□ -1.5
RPAIN-215ENST00000575112 ZNF73O43830 326 aaPredicted RBP5.71□□□□□ -1.5
RPAIN-215ENST00000575112 TM2D3Q9BRN9 247 aa5.71□□□□□ -1.5
RPAIN-215ENST00000575112 LINC01547P58512 204 aaPredicted RBP5.7□□□□□ -1.5
RPAIN-215ENST00000575112 CASC10Q5T4H9 136 aa5.7□□□□□ -1.5
RPAIN-215ENST00000575112 F8WDY8 70 aa5.7□□□□□ -1.5
RPAIN-215ENST00000575112 DEFB116Q30KQ4 102 aa5.7□□□□□ -1.5
RPAIN-215ENST00000575112 Q6ZQT0 140 aa5.7□□□□□ -1.5
RPAIN-215ENST00000575112 FAM168BA1KXE4 195 aa5.7□□□□□ -1.5
RPAIN-215ENST00000575112 NDUFS5O43920 106 aa5.7□□□□□ -1.5
RPAIN-215ENST00000575112 LINC00336Q6ZUF6 198 aa5.7□□□□□ -1.5
RPAIN-215ENST00000575112 LINC00167Q96N53 147 aa5.69□□□□□ -1.5
RPAIN-215ENST00000575112 Q6ZVQ6 151 aa5.69□□□□□ -1.5
RPAIN-215ENST00000575112 BPY2O14599 106 aa5.68□□□□□ -1.5
RPAIN-215ENST00000575112 LINC00575Q6W349 94 aa5.68□□□□□ -1.5
RPAIN-215ENST00000575112 UBE2AP49459 152 aa5.67□□□□□ -1.5
RPAIN-215ENST00000575112 CDK2AP2O75956 126 aa5.67□□□□□ -1.5
RPAIN-215ENST00000575112 FAM236DA0A1B0GTK5 79 aa5.67□□□□□ -1.5
RPAIN-215ENST00000575112 FAM236CP0DP71 79 aa5.67□□□□□ -1.5
RPAIN-215ENST00000575112 FP248Q71RG6 208 aaPredicted RBP5.67□□□□□ -1.5
RPAIN-215ENST00000575112 LRCOL1A6NCL2 159 aa5.66□□□□□ -1.5
RPAIN-215ENST00000575112 FAM229BQ4G0N7 80 aa5.66□□□□□ -1.5
RPAIN-215ENST00000575112 Q6ZRP5 223 aa5.66□□□□□ -1.5
RPAIN-215ENST00000575112 MPLKIPQ8TAP9 179 aa5.66□□□□□ -1.5
RPAIN-215ENST00000575112 WFDC13Q8IUB5 93 aa5.65□□□□□ -1.5
RPAIN-215ENST00000575112 H0Y9J4 135 aa5.65□□□□□ -1.51
RPAIN-215ENST00000575112 DNAH10Q8IVF4 4471 aa5.65□□□□□ -1.51
RPAIN-215ENST00000575112 ST20-AS1Q8NBB2 130 aa5.64□□□□□ -1.51
RPAIN-215ENST00000575112 PRLHP81277 87 aa5.63□□□□□ -1.51
RPAIN-215ENST00000575112 SERTAD4-AS1Q5TG53 156 aa5.63□□□□□ -1.51
RPAIN-215ENST00000575112 COX17Q14061 63 aa5.63□□□□□ -1.51
RPAIN-215ENST00000575112 MUC7Q8TAX7 377 aa5.63□□□□□ -1.51
RPAIN-215ENST00000575112 NDUFC2-KCTD14E9PQ53 114 aa5.62□□□□□ -1.51
RPAIN-215ENST00000575112 CHTF8P0CG12 524 aa5.62□□□□□ -1.51
RPAIN-215ENST00000575112 LINC00612Q8N6U2 182 aa5.62□□□□□ -1.51
RPAIN-215ENST00000575112 PKIGQ9Y2B9 76 aa5.62□□□□□ -1.51
RPAIN-215ENST00000575112 M0R378 163 aa5.62□□□□□ -1.51
RPAIN-215ENST00000575112 LINC00588Q9Y4M8 146 aa5.62□□□□□ -1.51
RPAIN-215ENST00000575112 NDUFC2O95298 119 aa5.62□□□□□ -1.51
RPAIN-215ENST00000575112 TGP01266 2768 aa5.61□□□□□ -1.51
RPAIN-215ENST00000575112 C7orf33Q8WU49 177 aa5.61□□□□□ -1.51
RPAIN-215ENST00000575112 TRAV7A0A075B6U4 112 aa5.61□□□□□ -1.51
RPAIN-215ENST00000575112 FAM30AQ9NZY2 134 aa5.61□□□□□ -1.51
RPAIN-215ENST00000575112 IGLV6-57P01721 117 aa5.6□□□□□ -1.51
RPAIN-215ENST00000575112 EGFEM1PQ0D2K5 195 aa5.6□□□□□ -1.51
RPAIN-215ENST00000575112 SPINK6Q6UWN8 80 aa5.6□□□□□ -1.51
RPAIN-215ENST00000575112 A0A0U1RQV1 116 aa5.6□□□□□ -1.51
RPAIN-215ENST00000575112 C15orf56Q8N910 161 aa5.6□□□□□ -1.51
RPAIN-215ENST00000575112 ATP5EP2Q5VTU8 51 aa5.6□□□□□ -1.51
RPAIN-215ENST00000575112 LOC110117498A0A087WWA1 95 aa5.59□□□□□ -1.52
RPAIN-215ENST00000575112 KLKP1Q107X0 134 aa5.59□□□□□ -1.52
RPAIN-215ENST00000575112 IGLV9-49A0A0B4J1Y8 123 aa5.58□□□□□ -1.52
RPAIN-215ENST00000575112 TRBV7-6A0A0J9YX20 115 aa5.58□□□□□ -1.52
RPAIN-215ENST00000575112 TRBV7-4A0A0J9YYF1 115 aa5.58□□□□□ -1.52
RPAIN-215ENST00000575112 EPM2AB3EWF7 344 aa5.58□□□□□ -1.52
RPAIN-215ENST00000575112 VPREB1P12018 145 aa5.58□□□□□ -1.52
RPAIN-215ENST00000575112 PRR34Q9NV39 138 aa5.58□□□□□ -1.52
RPAIN-215ENST00000575112 PRO0628Q9UI54 55 aa5.57□□□□□ -1.52
RPAIN-215ENST00000575112 SERP1Q9Y6X1 66 aa5.57□□□□□ -1.52
RPAIN-215ENST00000575112 K7EIL1 84 aa5.57□□□□□ -1.52
RPAIN-215ENST00000575112 PDE6GP18545 87 aa5.57□□□□□ -1.52
RPAIN-215ENST00000575112 BRK1Q8WUW1 75 aa5.57□□□□□ -1.52
RPAIN-215ENST00000575112 SEC61GP60059 68 aa5.56□□□□□ -1.52
RPAIN-215ENST00000575112 C1orf137Q5JT78 98 aa5.56□□□□□ -1.52
RPAIN-215ENST00000575112 DNAH10OSP0CZ25 163 aa5.55□□□□□ -1.52
RPAIN-215ENST00000575112 TMEM254Q8TBM7 123 aa5.55□□□□□ -1.52
RPAIN-215ENST00000575112 LINC01556Q5JQF7 62 aa5.54□□□□□ -1.52
RPAIN-215ENST00000575112 ERC2-IT1O76042 136 aa5.54□□□□□ -1.52
RPAIN-215ENST00000575112 IGKV4-1P06312 121 aa5.54□□□□□ -1.52
RPAIN-215ENST00000575112 MP68P56378 58 aa5.54□□□□□ -1.52
RPAIN-215ENST00000575112 A0A087WSZ3 146 aa5.54□□□□□ -1.52
RPAIN-215ENST00000575112 PHF5AQ7RTV0 110 aaKnown RBP5.53□□□□□ -1.52
RPAIN-215ENST00000575112 CXCL6P80162 114 aa5.53□□□□□ -1.52
RPAIN-215ENST00000575112 NDUFB1O75438 58 aa5.53□□□□□ -1.52
RPAIN-215ENST00000575112 ELOF1P60002 83 aaKnown RBP5.53□□□□□ -1.52
RPAIN-215ENST00000575112 MRPL55Q7Z7F7 128 aaKnown RBP5.53□□□□□ -1.52
RPAIN-215ENST00000575112 MDFIQ99750 246 aa5.52□□□□□ -1.53
RPAIN-215ENST00000575112 LY6G6CO95867 125 aa5.52□□□□□ -1.53
RPAIN-215ENST00000575112 B9D2Q9BPU9 175 aa5.51□□□□□ -1.53
RPAIN-215ENST00000575112 V9GYY9 64 aa5.51□□□□□ -1.53
RPAIN-215ENST00000575112 RPL37AP61513 92 aaKnown RBP5.51□□□□□ -1.53
RPAIN-215ENST00000575112 SMIM29Q86T20 159 aa5.51□□□□□ -1.53
RPAIN-215ENST00000575112 OCR1Q9BZK8 76 aa5.51□□□□□ -1.53
RPAIN-215ENST00000575112 DNAH9Q9NYC9 4486 aa5.5□□□□□ -1.53
RPAIN-215ENST00000575112 SMIM26A0A096LP01 95 aa5.5□□□□□ -1.53
RPAIN-215ENST00000575112 LINC00528Q8N1L1 170 aa5.5□□□□□ -1.53
RPAIN-215ENST00000575112 DHRS4-AS1Q9P1J3 65 aa5.49□□□□□ -1.53
RPAIN-215ENST00000575112 A8MU10 97 aa5.49□□□□□ -1.53
RPAIN-215ENST00000575112 REG3GQ6UW15 175 aa5.49□□□□□ -1.53
RPAIN-215ENST00000575112 ANAPC11Q9NYG5 84 aa5.49□□□□□ -1.53
RPAIN-215ENST00000575112 Q8N377 158 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms