RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 TRAV23DV6A0A075B6W5 121 aa6.43□□□□□ -1.38
RPAIN-214ENST00000574003 NDUFC2O95298 119 aa6.43□□□□□ -1.38
RPAIN-214ENST00000574003 C4orf48Q5BLP8 95 aa6.43□□□□□ -1.38
RPAIN-214ENST00000574003 Q6ZRX8 168 aa6.43□□□□□ -1.38
RPAIN-214ENST00000574003 CDIP1Q9H305 208 aa6.43□□□□□ -1.38
RPAIN-214ENST00000574003 C3orf79P0CE67 100 aa6.42□□□□□ -1.38
RPAIN-214ENST00000574003 S100A12P80511 92 aa6.42□□□□□ -1.38
RPAIN-214ENST00000574003 TPRXLQ17RH7 258 aa6.42□□□□□ -1.38
RPAIN-214ENST00000574003 SPAG11AQ6PDA7 123 aa6.42□□□□□ -1.38
RPAIN-214ENST00000574003 ST20-AS1Q8NBB2 130 aa6.42□□□□□ -1.38
RPAIN-214ENST00000574003 LINC00308Q8TCZ7 52 aa6.42□□□□□ -1.38
RPAIN-214ENST00000574003 ZNF815PA8K554 130 aa6.41□□□□□ -1.38
RPAIN-214ENST00000574003 ZNF73O43830 326 aaPredicted RBP6.41□□□□□ -1.38
RPAIN-214ENST00000574003 FAT4Q6V0I7 4981 aa6.41□□□□□ -1.38
RPAIN-214ENST00000574003 KRTDAPP60985 99 aa6.4□□□□□ -1.38
RPAIN-214ENST00000574003 PET117Q6UWS5 81 aa6.4□□□□□ -1.38
RPAIN-214ENST00000574003 OR13C6PQ8NH95 151 aa6.39□□□□□ -1.39
RPAIN-214ENST00000574003 CTAG1AP78358 180 aa6.38□□□□□ -1.39
RPAIN-214ENST00000574003 ANKRD39Q53RE8 183 aa6.38□□□□□ -1.39
RPAIN-214ENST00000574003 ATOH7Q8N100 152 aa6.38□□□□□ -1.39
RPAIN-214ENST00000574003 TIMM17BO60830 172 aa6.37□□□□□ -1.39
RPAIN-214ENST00000574003 SPINK1P00995 79 aa6.37□□□□□ -1.39
RPAIN-214ENST00000574003 KRTAP13-3Q3SY46 172 aa6.37□□□□□ -1.39
RPAIN-214ENST00000574003 C9orf153Q5TBE3 101 aa6.37□□□□□ -1.39
RPAIN-214ENST00000574003 SPANXCQ9NY87 97 aa6.37□□□□□ -1.39
RPAIN-214ENST00000574003 JOSD1Q15040 202 aaPredicted RBP6.36□□□□□ -1.39
RPAIN-214ENST00000574003 COA6Q5JTJ3 125 aaKnown RBP6.36□□□□□ -1.39
RPAIN-214ENST00000574003 SSBP3-AS1Q7Z2R9 100 aa6.36□□□□□ -1.39
RPAIN-214ENST00000574003 FP248Q71RG6 208 aaPredicted RBP6.35□□□□□ -1.39
RPAIN-214ENST00000574003 Q8N377 158 aa6.35□□□□□ -1.39
RPAIN-214ENST00000574003 C6orf99Q4VX62 202 aa6.33□□□□□ -1.4
RPAIN-214ENST00000574003 HRCT1Q6UXD1 115 aa6.33□□□□□ -1.4
RPAIN-214ENST00000574003 PCP2Q8IVA1 136 aa6.33□□□□□ -1.4
RPAIN-214ENST00000574003 SPANXDQ9BXN6 97 aa6.33□□□□□ -1.4
RPAIN-214ENST00000574003 A0A0U1RQV1 116 aa6.32□□□□□ -1.4
RPAIN-214ENST00000574003 COX7BP24311 80 aa6.32□□□□□ -1.4
RPAIN-214ENST00000574003 HINT1P49773 126 aaPredicted RBP6.32□□□□□ -1.4
RPAIN-214ENST00000574003 SCGB1D4Q6XE38 83 aa6.32□□□□□ -1.4
RPAIN-214ENST00000574003 KRTAP4-1Q9BYQ7 146 aa6.32□□□□□ -1.4
RPAIN-214ENST00000574003 LCE2AQ5TA79 106 aaPredicted RBP6.31□□□□□ -1.4
RPAIN-214ENST00000574003 C20orf202A1L168 122 aa6.3□□□□□ -1.4
RPAIN-214ENST00000574003 ELOF1P60002 83 aaKnown RBP6.3□□□□□ -1.4
RPAIN-214ENST00000574003 MUSTN1Q8IVN3 82 aa6.3□□□□□ -1.4
RPAIN-214ENST00000574003 DEFB105AQ8NG35 78 aa6.3□□□□□ -1.4
RPAIN-214ENST00000574003 SLC25A20O43772 301 aa6.29□□□□□ -1.4
RPAIN-214ENST00000574003 SPRR1BP22528 89 aa6.29□□□□□ -1.4
RPAIN-214ENST00000574003 RPS29P62273 56 aaKnown RBP6.29□□□□□ -1.4
RPAIN-214ENST00000574003 Q1RN00 199 aa6.29□□□□□ -1.4
RPAIN-214ENST00000574003 LINC00518Q8N0U6 118 aa6.29□□□□□ -1.4
RPAIN-214ENST00000574003 DHRS4-AS1Q9P1J3 65 aa6.29□□□□□ -1.4
RPAIN-214ENST00000574003 CBY1Q9Y3M2 126 aa6.29□□□□□ -1.4
RPAIN-214ENST00000574003 A0A0G2JQZ4 141 aa6.28□□□□□ -1.4
RPAIN-214ENST00000574003 A6NDN8 102 aa6.27□□□□□ -1.41
RPAIN-214ENST00000574003 TAL2Q16559 108 aa6.27□□□□□ -1.41
RPAIN-214ENST00000574003 ASB16-AS1Q495Z4 193 aa6.27□□□□□ -1.41
RPAIN-214ENST00000574003 C5orf52A6NGY3 159 aa6.26□□□□□ -1.41
RPAIN-214ENST00000574003 HIST3H2BBQ8N257 126 aa6.26□□□□□ -1.41
RPAIN-214ENST00000574003 LAMTOR3Q9UHA4 124 aa6.26□□□□□ -1.41
RPAIN-214ENST00000574003 H7C2G1 150 aa6.25□□□□□ -1.41
RPAIN-214ENST00000574003 IFITM1P13164 125 aa6.25□□□□□ -1.41
RPAIN-214ENST00000574003 LINC01547P58512 204 aaPredicted RBP6.25□□□□□ -1.41
RPAIN-214ENST00000574003 SMIM29Q86T20 159 aa6.25□□□□□ -1.41
RPAIN-214ENST00000574003 HIST1H2BLQ99880 126 aa6.25□□□□□ -1.41
RPAIN-214ENST00000574003 XP32Q5T750 250 aa6.24□□□□□ -1.41
RPAIN-214ENST00000574003 SMIM11BQ8TCY0 68 aa6.24□□□□□ -1.41
RPAIN-214ENST00000574003 A0A1B0GWB2 263 aa6.23□□□□□ -1.41
RPAIN-214ENST00000574003 SLC25A34Q6PIV7 304 aa6.23□□□□□ -1.41
RPAIN-214ENST00000574003 TRBV7-6A0A0J9YX20 115 aa6.22□□□□□ -1.41
RPAIN-214ENST00000574003 TEX49A0A1B0GTD5 131 aa6.22□□□□□ -1.41
RPAIN-214ENST00000574003 C9orf92A6NGG3 77 aa6.22□□□□□ -1.41
RPAIN-214ENST00000574003 SEC61BP60468 96 aaKnown RBP6.22□□□□□ -1.41
RPAIN-214ENST00000574003 Q6ZVH6 145 aa6.22□□□□□ -1.41
RPAIN-214ENST00000574003 S100A2P29034 98 aa6.21□□□□□ -1.42
RPAIN-214ENST00000574003 COPS9Q8WXC6 57 aa6.21□□□□□ -1.42
RPAIN-214ENST00000574003 KRTAP9-2Q9BYQ4 174 aa6.21□□□□□ -1.42
RPAIN-214ENST00000574003 IGLV5-48A0A075B6I7 105 aa6.2□□□□□ -1.42
RPAIN-214ENST00000574003 LIMD2Q9BT23 127 aa6.2□□□□□ -1.42
RPAIN-214ENST00000574003 PRO1933Q9H354 126 aa6.2□□□□□ -1.42
RPAIN-214ENST00000574003 TRAV13-2A0A0B4J235 113 aa6.19□□□□□ -1.42
RPAIN-214ENST00000574003 A4D1N5 150 aa6.19□□□□□ -1.42
RPAIN-214ENST00000574003 SNRPEP62304 92 aaKnown RBP6.18□□□□□ -1.42
RPAIN-214ENST00000574003 C12orf57Q99622 126 aa6.18□□□□□ -1.42
RPAIN-214ENST00000574003 HSBP1L1C9JCN9 74 aa6.17□□□□□ -1.42
RPAIN-214ENST00000574003 AKR1D1P51857 326 aa6.17□□□□□ -1.42
RPAIN-214ENST00000574003 S100A6P06703 90 aa6.16□□□□□ -1.42
RPAIN-214ENST00000574003 CD164Q04900 197 aa6.16□□□□□ -1.42
RPAIN-214ENST00000574003 PCOTHQ58A44 107 aa6.16□□□□□ -1.42
RPAIN-214ENST00000574003 SCGB1D1O95968 90 aa6.15□□□□□ -1.42
RPAIN-214ENST00000574003 S100A1P23297 94 aa6.15□□□□□ -1.42
RPAIN-214ENST00000574003 C1orf195Q5TG92 126 aa6.15□□□□□ -1.42
RPAIN-214ENST00000574003 LINC00575Q6W349 94 aa6.15□□□□□ -1.42
RPAIN-214ENST00000574003 Q6ZQY7 126 aa6.13□□□□□ -1.43
RPAIN-214ENST00000574003 NHP2Q9NX24 153 aaKnown RBP6.13□□□□□ -1.43
RPAIN-214ENST00000574003 LCE2CQ5TA81 110 aa6.12□□□□□ -1.43
RPAIN-214ENST00000574003 IGLV8-61A0A075B6I0 122 aa6.11□□□□□ -1.43
RPAIN-214ENST00000574003 hADV29S1A0JD25 119 aa6.11□□□□□ -1.43
RPAIN-214ENST00000574003 VAMP3Q15836 100 aa6.11□□□□□ -1.43
RPAIN-214ENST00000574003 Q5XG85 94 aa6.11□□□□□ -1.43
RPAIN-214ENST00000574003 HIST1H4GQ99525 98 aa6.11□□□□□ -1.43
RPAIN-214ENST00000574003 COX8AP10176 69 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms