RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 S100A6P06703 90 aa16.22■□□□□ 0.19
SCARF1-207ENST00000573867 S100A12P80511 92 aa16.22■□□□□ 0.19
SCARF1-207ENST00000573867 TRAV23DV6A0A075B6W5 121 aa16.21■□□□□ 0.19
SCARF1-207ENST00000573867 C3orf22Q8N5N4 141 aa16.21■□□□□ 0.19
SCARF1-207ENST00000573867 ERC2-IT1O76042 136 aa16.2■□□□□ 0.18
SCARF1-207ENST00000573867 TSPAN13O95857 204 aa16.2■□□□□ 0.18
SCARF1-207ENST00000573867 AKR1D1P51857 326 aa16.2■□□□□ 0.18
SCARF1-207ENST00000573867 SNRPEP62304 92 aaKnown RBP16.2■□□□□ 0.18
SCARF1-207ENST00000573867 SCGB1D4Q6XE38 83 aa16.2■□□□□ 0.18
SCARF1-207ENST00000573867 Q9BRP9 147 aa16.2■□□□□ 0.18
SCARF1-207ENST00000573867 SPANXDQ9BXN6 97 aa16.2■□□□□ 0.18
SCARF1-207ENST00000573867 Q6ZRX8 168 aa16.18■□□□□ 0.18
SCARF1-207ENST00000573867 ZNF706Q9Y5V0 76 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-207ENST00000573867 ZNF73O43830 326 aaPredicted RBP16.15■□□□□ 0.18
SCARF1-207ENST00000573867 C5orf52A6NGY3 159 aa16.14■□□□□ 0.17
SCARF1-207ENST00000573867 PPDPFQ9H3Y8 114 aa16.14■□□□□ 0.17
SCARF1-207ENST00000573867 LINC00304Q8N9R0 145 aa16.12■□□□□ 0.17
SCARF1-207ENST00000573867 OR13C6PQ8NH95 151 aa16.12■□□□□ 0.17
SCARF1-207ENST00000573867 LINC00483Q53H64 154 aa16.1■□□□□ 0.17
SCARF1-207ENST00000573867 IFITM1P13164 125 aa16.07■□□□□ 0.16
SCARF1-207ENST00000573867 GAGE2AQ6NT46 116 aa16.07■□□□□ 0.16
SCARF1-207ENST00000573867 MUSTN1Q8IVN3 82 aa16.07■□□□□ 0.16
SCARF1-207ENST00000573867 PRR4Q16378 134 aa16.06■□□□□ 0.16
SCARF1-207ENST00000573867 LINC00518Q8N0U6 118 aa16.06■□□□□ 0.16
SCARF1-207ENST00000573867 Q6ZVH6 145 aa16.05■□□□□ 0.16
SCARF1-207ENST00000573867 HSBP1L1C9JCN9 74 aa16.03■□□□□ 0.16
SCARF1-207ENST00000573867 JOSD1Q15040 202 aaPredicted RBP16.03■□□□□ 0.16
SCARF1-207ENST00000573867 CBY1Q9Y3M2 126 aa16.03■□□□□ 0.16
SCARF1-207ENST00000573867 SCGB1D1O95968 90 aa16.02■□□□□ 0.16
SCARF1-207ENST00000573867 ST20-AS1Q8NBB2 130 aa16.01■□□□□ 0.15
SCARF1-207ENST00000573867 COPS9Q8WXC6 57 aa16■□□□□ 0.15
SCARF1-207ENST00000573867 C6orf99Q4VX62 202 aa15.98■□□□□ 0.15
SCARF1-207ENST00000573867 RETNLBQ9BQ08 111 aa15.98■□□□□ 0.15
SCARF1-207ENST00000573867 HINT1P49773 126 aaPredicted RBP15.97■□□□□ 0.15
SCARF1-207ENST00000573867 Q8NBF4 154 aa15.97■□□□□ 0.15
SCARF1-207ENST00000573867 ELOF1P60002 83 aaKnown RBP15.95■□□□□ 0.14
SCARF1-207ENST00000573867 RNF213Q63HN8 5207 aa15.95■□□□□ 0.14
SCARF1-207ENST00000573867 IGLV9-49A0A0B4J1Y8 123 aa15.93■□□□□ 0.14
SCARF1-207ENST00000573867 A6NDN8 102 aa15.93■□□□□ 0.14
SCARF1-207ENST00000573867 COX7BP24311 80 aa15.93■□□□□ 0.14
SCARF1-207ENST00000573867 MOBPQ13875 183 aa15.93■□□□□ 0.14
SCARF1-207ENST00000573867 CTAG1AP78358 180 aa15.91■□□□□ 0.14
SCARF1-207ENST00000573867 SPAG11AQ6PDA7 123 aa15.9■□□□□ 0.14
SCARF1-207ENST00000573867 DHRS4-AS1Q9P1J3 65 aa15.9■□□□□ 0.14
SCARF1-207ENST00000573867 COX8AP10176 69 aa15.88■□□□□ 0.13
SCARF1-207ENST00000573867 TRBV7-6A0A0J9YX20 115 aa15.86■□□□□ 0.13
SCARF1-207ENST00000573867 TRAV13-2A0A0B4J235 113 aa15.85■□□□□ 0.13
SCARF1-207ENST00000573867 A4D1N5 150 aa15.85■□□□□ 0.13
SCARF1-207ENST00000573867 SPRR1BP22528 89 aa15.85■□□□□ 0.13
SCARF1-207ENST00000573867 SSBP3-AS1Q7Z2R9 100 aa15.84■□□□□ 0.13
SCARF1-207ENST00000573867 SMIM11BQ8TCY0 68 aa15.84■□□□□ 0.13
SCARF1-207ENST00000573867 C4orf48Q5BLP8 95 aa15.83■□□□□ 0.12
SCARF1-207ENST00000573867 A0A1B0GWB2 263 aa15.81■□□□□ 0.12
SCARF1-207ENST00000573867 DLEU1O43261 78 aa15.81■□□□□ 0.12
SCARF1-207ENST00000573867 PAM16Q9Y3D7 125 aa15.81■□□□□ 0.12
SCARF1-207ENST00000573867 C14orf144Q96I85 54 aa15.8■□□□□ 0.12
SCARF1-207ENST00000573867 C9orf153Q5TBE3 101 aa15.79■□□□□ 0.12
SCARF1-207ENST00000573867 SPINK1P00995 79 aa15.78■□□□□ 0.12
SCARF1-207ENST00000573867 SPATA45Q537H7 98 aa15.78■□□□□ 0.12
SCARF1-207ENST00000573867 HIST1H4GQ99525 98 aa15.77■□□□□ 0.12
SCARF1-207ENST00000573867 IGLV7-46A0A075B6I9 117 aa15.75■□□□□ 0.11
SCARF1-207ENST00000573867 C12orf57Q99622 126 aa15.75■□□□□ 0.11
SCARF1-207ENST00000573867 LINC01547P58512 204 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-207ENST00000573867 DEFB105AQ8NG35 78 aa15.74■□□□□ 0.11
SCARF1-207ENST00000573867 VAMP8Q9BV40 100 aa15.74■□□□□ 0.11
SCARF1-207ENST00000573867 TAL2Q16559 108 aa15.71■□□□□ 0.11
SCARF1-207ENST00000573867 C2orf91Q6ZV80 131 aa15.71■□□□□ 0.11
SCARF1-207ENST00000573867 IGLV5-48A0A075B6I7 105 aa15.69■□□□□ 0.1
SCARF1-207ENST00000573867 RPS29P62273 56 aaKnown RBP15.69■□□□□ 0.1
SCARF1-207ENST00000573867 TPRXLQ17RH7 258 aa15.69■□□□□ 0.1
SCARF1-207ENST00000573867 Q8N377 158 aa15.69■□□□□ 0.1
SCARF1-207ENST00000573867 LAMTOR3Q9UHA4 124 aa15.69■□□□□ 0.1
SCARF1-207ENST00000573867 TEX49A0A1B0GTD5 131 aa15.68■□□□□ 0.1
SCARF1-207ENST00000573867 Q1RN00 199 aa15.68■□□□□ 0.1
SCARF1-207ENST00000573867 SLC25A34Q6PIV7 304 aa15.68■□□□□ 0.1
SCARF1-207ENST00000573867 SMIM29Q86T20 159 aa15.68■□□□□ 0.1
SCARF1-207ENST00000573867 HIGD1BQ9P298 99 aa15.68■□□□□ 0.1
SCARF1-207ENST00000573867 TMA7Q9Y2S6 64 aaKnown RBP15.68■□□□□ 0.1
SCARF1-207ENST00000573867 PYY3Q5JQD4 70 aa15.67■□□□□ 0.1
SCARF1-207ENST00000573867 FP248Q71RG6 208 aaPredicted RBP15.65■□□□□ 0.1
SCARF1-207ENST00000573867 LINC00575Q6W349 94 aa15.63■□□□□ 0.09
SCARF1-207ENST00000573867 NHP2Q9NX24 153 aaKnown RBP15.62■□□□□ 0.09
SCARF1-207ENST00000573867 CFC1BP0CG36 223 aa15.61■□□□□ 0.09
SCARF1-207ENST00000573867 CFC1P0CG37 223 aa15.61■□□□□ 0.09
SCARF1-207ENST00000573867 MUC17Q685J3 4493 aa15.61■□□□□ 0.09
SCARF1-207ENST00000573867 VAMP3Q15836 100 aa15.6■□□□□ 0.09
SCARF1-207ENST00000573867 HRCT1Q6UXD1 115 aa15.58■□□□□ 0.08
SCARF1-207ENST00000573867 CDIP1Q9H305 208 aa15.58■□□□□ 0.08
SCARF1-207ENST00000573867 MUC2Q02817 5179 aa15.57■□□□□ 0.08
SCARF1-207ENST00000573867 SLC25A20O43772 301 aa15.56■□□□□ 0.08
SCARF1-207ENST00000573867 KRTAP13-3Q3SY46 172 aa15.55■□□□□ 0.08
SCARF1-207ENST00000573867 A0A0G2JQZ4 141 aa15.54■□□□□ 0.08
SCARF1-207ENST00000573867 hADV29S1A0JD25 119 aa15.54■□□□□ 0.08
SCARF1-207ENST00000573867 H7C2G1 150 aa15.54■□□□□ 0.08
SCARF1-207ENST00000573867 Q6ZQY7 126 aa15.53■□□□□ 0.08
SCARF1-207ENST00000573867 CEND1Q8N111 149 aa15.53■□□□□ 0.08
SCARF1-207ENST00000573867 PRO1933Q9H354 126 aa15.53■□□□□ 0.08
SCARF1-207ENST00000573867 A0A0B4J2C4 111 aa15.52■□□□□ 0.08
SCARF1-207ENST00000573867 RAB37Q96AX2 223 aa15.5■□□□□ 0.07
SCARF1-207ENST00000573867 FXYD2P54710 66 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms