RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 Q8NDZ9 215 aa8.32□□□□□ -1.08
TVP23A-208ENST00000573857 LINC00308Q8TCZ7 52 aa8.32□□□□□ -1.08
TVP23A-208ENST00000573857 LITAFQ99732 161 aa8.32□□□□□ -1.08
TVP23A-208ENST00000573857 TTTY13Q9BZ97 58 aa8.32□□□□□ -1.08
TVP23A-208ENST00000573857 SPANXB1Q9NS25 103 aaPredicted RBP8.32□□□□□ -1.08
TVP23A-208ENST00000573857 COX8AP10176 69 aa8.31□□□□□ -1.08
TVP23A-208ENST00000573857 A0A0U1RQV1 116 aa8.3□□□□□ -1.08
TVP23A-208ENST00000573857 SPATA45Q537H7 98 aa8.3□□□□□ -1.08
TVP23A-208ENST00000573857 LINC00518Q8N0U6 118 aa8.3□□□□□ -1.08
TVP23A-208ENST00000573857 RETNLBQ9BQ08 111 aa8.3□□□□□ -1.08
TVP23A-208ENST00000573857 PYY3Q5JQD4 70 aa8.29□□□□□ -1.08
TVP23A-208ENST00000573857 PAM16Q9Y3D7 125 aa8.29□□□□□ -1.08
TVP23A-208ENST00000573857 FAT4Q6V0I7 4981 aa8.28□□□□□ -1.08
TVP23A-208ENST00000573857 S100A7L2Q5SY68 101 aa8.27□□□□□ -1.09
TVP23A-208ENST00000573857 SLC25A34Q6PIV7 304 aa8.27□□□□□ -1.09
TVP23A-208ENST00000573857 NCR3O14931 201 aa8.26□□□□□ -1.09
TVP23A-208ENST00000573857 NPC2P61916 151 aa8.26□□□□□ -1.09
TVP23A-208ENST00000573857 CTAG1AP78358 180 aa8.26□□□□□ -1.09
TVP23A-208ENST00000573857 PRYO14603 147 aa8.25□□□□□ -1.09
TVP23A-208ENST00000573857 DDTP30046 118 aa8.25□□□□□ -1.09
TVP23A-208ENST00000573857 SOSTDC1Q6X4U4 206 aa8.25□□□□□ -1.09
TVP23A-208ENST00000573857 KCNQ1DNQ9H478 68 aa8.25□□□□□ -1.09
TVP23A-208ENST00000573857 TPRXLQ17RH7 258 aa8.24□□□□□ -1.09
TVP23A-208ENST00000573857 C3orf22Q8N5N4 141 aa8.24□□□□□ -1.09
TVP23A-208ENST00000573857 HIGD2AQ9BW72 106 aa8.24□□□□□ -1.09
TVP23A-208ENST00000573857 HIGD1BQ9P298 99 aa8.24□□□□□ -1.09
TVP23A-208ENST00000573857 IGLV7-46A0A075B6I9 117 aa8.23□□□□□ -1.09
TVP23A-208ENST00000573857 IGLV6-57P01721 117 aa8.23□□□□□ -1.09
TVP23A-208ENST00000573857 MUSTN1Q8IVN3 82 aa8.23□□□□□ -1.09
TVP23A-208ENST00000573857 C14orf144Q96I85 54 aa8.23□□□□□ -1.09
TVP23A-208ENST00000573857 MUC17Q685J3 4493 aa8.23□□□□□ -1.09
TVP23A-208ENST00000573857 TRBV10-3A0A0K0K1G6 114 aa8.22□□□□□ -1.09
TVP23A-208ENST00000573857 LINC00337Q8N6G1 96 aa8.22□□□□□ -1.09
TVP23A-208ENST00000573857 HIST1H4GQ99525 98 aa8.22□□□□□ -1.09
TVP23A-208ENST00000573857 CDIP1Q9H305 208 aa8.22□□□□□ -1.09
TVP23A-208ENST00000573857 TRAV13-2A0A0B4J235 113 aa8.21□□□□□ -1.1
TVP23A-208ENST00000573857 EIF4EBP3O60516 100 aaPredicted RBP8.21□□□□□ -1.1
TVP23A-208ENST00000573857 HINT1P49773 126 aaPredicted RBP8.21□□□□□ -1.1
TVP23A-208ENST00000573857 SPRR4Q96PI1 79 aa8.21□□□□□ -1.1
TVP23A-208ENST00000573857 SMIM6P0DI80 62 aa8.2□□□□□ -1.1
TVP23A-208ENST00000573857 OR13C6PQ8NH95 151 aa8.2□□□□□ -1.1
TVP23A-208ENST00000573857 TRAV23DV6A0A075B6W5 121 aa8.19□□□□□ -1.1
TVP23A-208ENST00000573857 ETDCA0A1B0GVM5 59 aa8.19□□□□□ -1.1
TVP23A-208ENST00000573857 SPRR1AP35321 89 aa8.19□□□□□ -1.1
TVP23A-208ENST00000573857 TAL2Q16559 108 aa8.19□□□□□ -1.1
TVP23A-208ENST00000573857 SPAG11AQ6PDA7 123 aa8.19□□□□□ -1.1
TVP23A-208ENST00000573857 ZNF706Q9Y5V0 76 aaPredicted RBP8.19□□□□□ -1.1
TVP23A-208ENST00000573857 LCE2AQ5TA79 106 aaPredicted RBP8.18□□□□□ -1.1
TVP23A-208ENST00000573857 UQCR10Q9UDW1 63 aa8.18□□□□□ -1.1
TVP23A-208ENST00000573857 TMEM238LA0A1B0GVL6 79 aa8.16□□□□□ -1.1
TVP23A-208ENST00000573857 A6NDN8 102 aa8.16□□□□□ -1.1
TVP23A-208ENST00000573857 A6NJY4 79 aa8.16□□□□□ -1.1
TVP23A-208ENST00000573857 ZNF73O43830 326 aaPredicted RBP8.16□□□□□ -1.1
TVP23A-208ENST00000573857 A4D1N5 150 aa8.15□□□□□ -1.1
TVP23A-208ENST00000573857 KRTAP4-16G5E9R7 235 aaPredicted RBP8.15□□□□□ -1.1
TVP23A-208ENST00000573857 TRBV7-6A0A0J9YX20 115 aa8.14□□□□□ -1.11
TVP23A-208ENST00000573857 C4orf48Q5BLP8 95 aa8.14□□□□□ -1.11
TVP23A-208ENST00000573857 C2orf91Q6ZV80 131 aa8.14□□□□□ -1.11
TVP23A-208ENST00000573857 FP248Q71RG6 208 aaPredicted RBP8.14□□□□□ -1.11
TVP23A-208ENST00000573857 Q8NBF4 154 aa8.14□□□□□ -1.11
TVP23A-208ENST00000573857 Q6ZRX8 168 aa8.13□□□□□ -1.11
TVP23A-208ENST00000573857 SMCR5Q8TEV8 140 aa8.13□□□□□ -1.11
TVP23A-208ENST00000573857 KRTAP9-2Q9BYQ4 174 aa8.13□□□□□ -1.11
TVP23A-208ENST00000573857 B5MCH6 92 aa8.12□□□□□ -1.11
TVP23A-208ENST00000573857 CEND1Q8N111 149 aa8.12□□□□□ -1.11
TVP23A-208ENST00000573857 LOC105371267A0A1B0GV96 52 aa8.11□□□□□ -1.11
TVP23A-208ENST00000573857 HSD52Q0P140 79 aa8.11□□□□□ -1.11
TVP23A-208ENST00000573857 LINC00483Q53H64 154 aa8.11□□□□□ -1.11
TVP23A-208ENST00000573857 VAMP3Q15836 100 aa8.1□□□□□ -1.11
TVP23A-208ENST00000573857 RAB37Q96AX2 223 aa8.1□□□□□ -1.11
TVP23A-208ENST00000573857 DHRS4-AS1Q9P1J3 65 aa8.1□□□□□ -1.11
TVP23A-208ENST00000573857 A0A1B0GWB2 263 aa8.09□□□□□ -1.11
TVP23A-208ENST00000573857 SPINK1P00995 79 aa8.09□□□□□ -1.11
TVP23A-208ENST00000573857 C6orf99Q4VX62 202 aa8.09□□□□□ -1.11
TVP23A-208ENST00000573857 A0A0B4J2C4 111 aa8.08□□□□□ -1.12
TVP23A-208ENST00000573857 COX7BP24311 80 aa8.08□□□□□ -1.12
TVP23A-208ENST00000573857 KRTAP13-3Q3SY46 172 aa8.08□□□□□ -1.12
TVP23A-208ENST00000573857 TSTD3H0UI37 97 aa8.07□□□□□ -1.12
TVP23A-208ENST00000573857 ERC2-IT1O76042 136 aa8.07□□□□□ -1.12
TVP23A-208ENST00000573857 ELOF1P60002 83 aaKnown RBP8.07□□□□□ -1.12
TVP23A-208ENST00000573857 GAGE2AQ6NT46 116 aa8.07□□□□□ -1.12
TVP23A-208ENST00000573857 NHP2Q9NX24 153 aaKnown RBP8.07□□□□□ -1.12
TVP23A-208ENST00000573857 MOBPQ13875 183 aa8.06□□□□□ -1.12
TVP23A-208ENST00000573857 SMIM11BQ8TCY0 68 aa8.06□□□□□ -1.12
TVP23A-208ENST00000573857 IGLV9-49A0A0B4J1Y8 123 aa8.05□□□□□ -1.12
TVP23A-208ENST00000573857 CFC1BP0CG36 223 aa8.05□□□□□ -1.12
TVP23A-208ENST00000573857 CFC1P0CG37 223 aa8.05□□□□□ -1.12
TVP23A-208ENST00000573857 BVES-AS1Q5T3Y7 98 aa8.05□□□□□ -1.12
TVP23A-208ENST00000573857 C12orf57Q99622 126 aa8.05□□□□□ -1.12
TVP23A-208ENST00000573857 Q9BRP9 147 aa8.05□□□□□ -1.12
TVP23A-208ENST00000573857 SLC25A20O43772 301 aa8.04□□□□□ -1.12
TVP23A-208ENST00000573857 SNCGO76070 127 aa8.04□□□□□ -1.12
TVP23A-208ENST00000573857 PRO1854Q9UHT4 67 aa8.04□□□□□ -1.12
TVP23A-208ENST00000573857 RPS29P62273 56 aaKnown RBP8.03□□□□□ -1.12
TVP23A-208ENST00000573857 ASB16-AS1Q495Z4 193 aa8.03□□□□□ -1.12
TVP23A-208ENST00000573857 SSBP3-AS1Q7Z2R9 100 aa8.03□□□□□ -1.12
TVP23A-208ENST00000573857 M0R143 59 aa8.02□□□□□ -1.13
TVP23A-208ENST00000573857 Q8N377 158 aa8.02□□□□□ -1.13
TVP23A-208ENST00000573857 PRO1933Q9H354 126 aa8.02□□□□□ -1.13
TVP23A-208ENST00000573857 FXYD2P54710 66 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms