RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 URB1-AS1Q96HZ7 61 aa10.71□□□□□ -0.69
CACNA1A-202ENST00000573710 PSORS1C2Q9UIG4 136 aa10.71□□□□□ -0.69
CACNA1A-202ENST00000573710 A0A1W2PPR1 153 aa10.7□□□□□ -0.7
CACNA1A-202ENST00000573710 H3BPC8 53 aa10.69□□□□□ -0.7
CACNA1A-202ENST00000573710 USP24Q9UPU5 2620 aa10.68□□□□□ -0.7
CACNA1A-202ENST00000573710 MUC22E2RYF6 1773 aaPredicted RBP10.68□□□□□ -0.7
CACNA1A-202ENST00000573710 RPS28P62857 69 aaKnown RBP10.65□□□□□ -0.7
CACNA1A-202ENST00000573710 IGHV3OR16-9A0A0B4J2B5 98 aa10.64□□□□□ -0.71
CACNA1A-202ENST00000573710 CD164Q04900 197 aa10.63□□□□□ -0.71
CACNA1A-202ENST00000573710 LCA10Q71F78 164 aa10.61□□□□□ -0.71
CACNA1A-202ENST00000573710 Q6ZSA8 131 aa10.6□□□□□ -0.71
CACNA1A-202ENST00000573710 CYP4F30PQ9H0H9 118 aa10.6□□□□□ -0.71
CACNA1A-202ENST00000573710 PLAC4Q8WY50 150 aa10.58□□□□□ -0.72
CACNA1A-202ENST00000573710 FAM104AQ969W3 186 aa10.58□□□□□ -0.72
CACNA1A-202ENST00000573710 PRR15Q8IV56 129 aa10.57□□□□□ -0.72
CACNA1A-202ENST00000573710 LINC00310P59036 64 aa10.57□□□□□ -0.72
CACNA1A-202ENST00000573710 C15orf56Q8N910 161 aa10.56□□□□□ -0.72
CACNA1A-202ENST00000573710 IGFL1Q6UW32 110 aa10.54□□□□□ -0.72
CACNA1A-202ENST00000573710 A0A096LNJ9 63 aa10.54□□□□□ -0.72
CACNA1A-202ENST00000573710 A0A1B0GVX0 72 aa10.54□□□□□ -0.72
CACNA1A-202ENST00000573710 Q1T7F1 81 aa10.54□□□□□ -0.72
CACNA1A-202ENST00000573710 POLQO75417 2590 aa10.53□□□□□ -0.72
CACNA1A-202ENST00000573710 LOC110117498A0A087WWA1 95 aa10.52□□□□□ -0.72
CACNA1A-202ENST00000573710 H3BS24 57 aa10.52□□□□□ -0.72
CACNA1A-202ENST00000573710 A0A0A0MQY5 61 aa10.52□□□□□ -0.73
CACNA1A-202ENST00000573710 GVQW2A0A096LPI5 108 aaPredicted RBP10.51□□□□□ -0.73
CACNA1A-202ENST00000573710 Q8NAQ8 132 aa10.51□□□□□ -0.73
CACNA1A-202ENST00000573710 ZNF861PO60384 105 aa10.5□□□□□ -0.73
CACNA1A-202ENST00000573710 SMCPP49901 116 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-202ENST00000573710 PRR26Q8N8Z3 221 aa10.49□□□□□ -0.73
CACNA1A-202ENST00000573710 LINC00528Q8N1L1 170 aa10.48□□□□□ -0.73
CACNA1A-202ENST00000573710 H1FX-AS1Q4G0G2 97 aa10.48□□□□□ -0.73
CACNA1A-202ENST00000573710 H3BNG1 76 aa10.47□□□□□ -0.73
CACNA1A-202ENST00000573710 SPINK7P58062 85 aa10.47□□□□□ -0.73
CACNA1A-202ENST00000573710 DNAH12Q6ZR08 3092 aa10.45□□□□□ -0.74
CACNA1A-202ENST00000573710 EPG5Q9HCE0 2579 aa10.45□□□□□ -0.74
CACNA1A-202ENST00000573710 KRTAP10-11P60412 298 aa10.43□□□□□ -0.74
CACNA1A-202ENST00000573710 A0A1B0GW54 56 aa10.42□□□□□ -0.74
CACNA1A-202ENST00000573710 A0A087WTM6 91 aa10.41□□□□□ -0.74
CACNA1A-202ENST00000573710 K7EIL1 84 aa10.4□□□□□ -0.74
CACNA1A-202ENST00000573710 PRRC2CQ9Y520 2896 aaKnown RBP10.4□□□□□ -0.74
CACNA1A-202ENST00000573710 C9orf163Q8N9P6 203 aa10.39□□□□□ -0.75
CACNA1A-202ENST00000573710 IGLV7-43P04211 117 aa10.38□□□□□ -0.75
CACNA1A-202ENST00000573710 IGLV7-46A0A075B6I9 117 aa10.38□□□□□ -0.75
CACNA1A-202ENST00000573710 A0A1B0GU33 70 aa10.36□□□□□ -0.75
CACNA1A-202ENST00000573710 COX8CQ7Z4L0 72 aa10.35□□□□□ -0.75
CACNA1A-202ENST00000573710 Q5VSD8 79 aa10.35□□□□□ -0.75
CACNA1A-202ENST00000573710 CEP350Q5VT06 3117 aa10.34□□□□□ -0.75
CACNA1A-202ENST00000573710 S4R3F8 94 aa10.33□□□□□ -0.76
CACNA1A-202ENST00000573710 Q8N377 158 aa10.33□□□□□ -0.76
CACNA1A-202ENST00000573710 HRES1P13985 223 aa10.31□□□□□ -0.76
CACNA1A-202ENST00000573710 PCNTO95613 3336 aa10.3□□□□□ -0.76
CACNA1A-202ENST00000573710 CHD8Q9HCK8 2581 aa10.3□□□□□ -0.76
CACNA1A-202ENST00000573710 PRAC1Q96KF2 57 aa10.3□□□□□ -0.76
CACNA1A-202ENST00000573710 CSAG1Q6PB30 78 aa10.27□□□□□ -0.76
CACNA1A-202ENST00000573710 R4GN34 69 aa10.27□□□□□ -0.77
CACNA1A-202ENST00000573710 FASNP49327 2511 aaKnown RBP10.27□□□□□ -0.77
CACNA1A-202ENST00000573710 C5orf42Q9H799 3197 aa10.27□□□□□ -0.77
CACNA1A-202ENST00000573710 KCNQ1DNQ9H478 68 aa10.26□□□□□ -0.77
CACNA1A-202ENST00000573710 USP9YO00507 2555 aaPredicted RBP10.26□□□□□ -0.77
CACNA1A-202ENST00000573710 LINC01546A6NGU7 62 aa10.24□□□□□ -0.77
CACNA1A-202ENST00000573710 LITAFQ99732 161 aa10.23□□□□□ -0.77
CACNA1A-202ENST00000573710 LINC00612Q8N6U2 182 aa10.22□□□□□ -0.77
CACNA1A-202ENST00000573710 CASC10Q5T4H9 136 aa10.22□□□□□ -0.77
CACNA1A-202ENST00000573710 PRO0461Q9UI25 63 aa10.2□□□□□ -0.78
CACNA1A-202ENST00000573710 COL4A2P08572 1712 aa10.18□□□□□ -0.78
CACNA1A-202ENST00000573710 ANKRD11Q6UB99 2663 aaPredicted RBP10.18□□□□□ -0.78
CACNA1A-202ENST00000573710 SPRR4Q96PI1 79 aa10.18□□□□□ -0.78
CACNA1A-202ENST00000573710 H7BZZ5 65 aa10.17□□□□□ -0.78
CACNA1A-202ENST00000573710 TNP2Q05952 138 aa10.16□□□□□ -0.78
CACNA1A-202ENST00000573710 REV3LO60673 3130 aa10.15□□□□□ -0.79
CACNA1A-202ENST00000573710 DMAC1Q96GE9 116 aa10.08□□□□□ -0.8
CACNA1A-202ENST00000573710 KLKP1Q107X0 134 aa10.08□□□□□ -0.8
CACNA1A-202ENST00000573710 EIF4EBP3O60516 100 aaPredicted RBP10.08□□□□□ -0.8
CACNA1A-202ENST00000573710 KRTAP10-3P60369 221 aa10.06□□□□□ -0.8
CACNA1A-202ENST00000573710 M0QZ58 72 aa10.05□□□□□ -0.8
CACNA1A-202ENST00000573710 C20orf166-AS1Q96NR2 134 aa10.05□□□□□ -0.8
CACNA1A-202ENST00000573710 Q8N9P0 234 aaPredicted RBP10.05□□□□□ -0.8
CACNA1A-202ENST00000573710 XIRP2A4UGR9 3374 aa10.03□□□□□ -0.8
CACNA1A-202ENST00000573710 KLK9Q2XQG4 91 aa10.02□□□□□ -0.81
CACNA1A-202ENST00000573710 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-202ENST00000573710 SPANXA2-OT1Q8N9U9 137 aa10□□□□□ -0.81
CACNA1A-202ENST00000573710 FAM229BQ4G0N7 80 aa10□□□□□ -0.81
CACNA1A-202ENST00000573710 AKAP13Q12802 2813 aa9.99□□□□□ -0.81
CACNA1A-202ENST00000573710 STAB1Q9NY15 2570 aa9.99□□□□□ -0.81
CACNA1A-202ENST00000573710 C19orf73Q9NVV2 129 aa9.99□□□□□ -0.81
CACNA1A-202ENST00000573710 FREM2Q5SZK8 3169 aa9.99□□□□□ -0.81
CACNA1A-202ENST00000573710 A0A1W2PNM2 257 aa9.96□□□□□ -0.82
CACNA1A-202ENST00000573710 C10orf142B7Z368 130 aa9.96□□□□□ -0.82
CACNA1A-202ENST00000573710 CFAP46Q8IYW2 2715 aa9.96□□□□□ -0.82
CACNA1A-202ENST00000573710 MGAM2Q2M2H8 2515 aa9.95□□□□□ -0.82
CACNA1A-202ENST00000573710 PRR34Q9NV39 138 aa9.94□□□□□ -0.82
CACNA1A-202ENST00000573710 ROMO1P60602 79 aa9.94□□□□□ -0.82
CACNA1A-202ENST00000573710 HECTD1Q9ULT8 2610 aa9.93□□□□□ -0.82
CACNA1A-202ENST00000573710 GIG44P09565 113 aaPredicted RBP9.93□□□□□ -0.82
CACNA1A-202ENST00000573710 LAMA2P24043 3122 aaKnown RBP9.92□□□□□ -0.82
CACNA1A-202ENST00000573710 ADM2Q7Z4H4 148 aa9.91□□□□□ -0.82
CACNA1A-202ENST00000573710 CFAP54Q96N23 3096 aa9.91□□□□□ -0.82
CACNA1A-202ENST00000573710 FP248Q71RG6 208 aaPredicted RBP9.91□□□□□ -0.82
CACNA1A-202ENST00000573710 DMBT1Q9UGM3 2413 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms