RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 LINC00575Q6W349 94 aa9.16□□□□□ -0.94
TVP23A-207ENST00000573360 KRTAP26-1Q6PEX3 210 aa9.15□□□□□ -0.94
TVP23A-207ENST00000573360 SCXQ7RTU7 201 aa9.15□□□□□ -0.94
TVP23A-207ENST00000573360 SERP2Q8N6R1 65 aa9.14□□□□□ -0.95
TVP23A-207ENST00000573360 UPK3BQ9BT76 320 aa9.14□□□□□ -0.95
TVP23A-207ENST00000573360 DIRC1Q969H9 104 aa9.13□□□□□ -0.95
TVP23A-207ENST00000573360 OBSCN-AS1Q96MR7 158 aa9.13□□□□□ -0.95
TVP23A-207ENST00000573360 NBDYA0A0U1RRE5 68 aa9.13□□□□□ -0.95
TVP23A-207ENST00000573360 Q6ZRP5 223 aa9.12□□□□□ -0.95
TVP23A-207ENST00000573360 FAM19A5Q7Z5A7 132 aaPredicted RBP9.12□□□□□ -0.95
TVP23A-207ENST00000573360 RPL37AP8A6NKH3 93 aa9.11□□□□□ -0.95
TVP23A-207ENST00000573360 FAM168BA1KXE4 195 aa9.11□□□□□ -0.95
TVP23A-207ENST00000573360 PLECQ15149 4684 aaKnown RBP9.1□□□□□ -0.95
TVP23A-207ENST00000573360 C20orf197Q8N268 126 aa9.1□□□□□ -0.95
TVP23A-207ENST00000573360 C2orf48Q96LS8 159 aa9.1□□□□□ -0.95
TVP23A-207ENST00000573360 CYSTM1Q9H1C7 97 aa9.1□□□□□ -0.95
TVP23A-207ENST00000573360 COX7BP24311 80 aa9.1□□□□□ -0.95
TVP23A-207ENST00000573360 DEFB105AQ8NG35 78 aa9.1□□□□□ -0.95
TVP23A-207ENST00000573360 NKAPP1Q8N9T2 125 aa9.09□□□□□ -0.95
TVP23A-207ENST00000573360 ZNF73O43830 326 aaPredicted RBP9.09□□□□□ -0.95
TVP23A-207ENST00000573360 CHTF8P0CG12 524 aa9.09□□□□□ -0.95
TVP23A-207ENST00000573360 NDUFC2-KCTD14E9PQ53 114 aa9.08□□□□□ -0.96
TVP23A-207ENST00000573360 DNAH10Q8IVF4 4471 aa9.08□□□□□ -0.96
TVP23A-207ENST00000573360 STARD9Q9P2P6 4700 aa9.08□□□□□ -0.96
TVP23A-207ENST00000573360 GVQW2A0A096LPI5 108 aaPredicted RBP9.07□□□□□ -0.96
TVP23A-207ENST00000573360 CRYGAP11844 174 aa9.07□□□□□ -0.96
TVP23A-207ENST00000573360 J3KT08 172 aa9.06□□□□□ -0.96
TVP23A-207ENST00000573360 WWC2-AS2Q96NR7 200 aa9.06□□□□□ -0.96
TVP23A-207ENST00000573360 DNAH7Q8WXX0 4024 aa9.06□□□□□ -0.96
TVP23A-207ENST00000573360 LINC00167Q96N53 147 aa9.06□□□□□ -0.96
TVP23A-207ENST00000573360 Q6ZQT0 140 aa9.06□□□□□ -0.96
TVP23A-207ENST00000573360 SVIPQ8NHG7 77 aa9.04□□□□□ -0.96
TVP23A-207ENST00000573360 Q6ZVQ6 151 aa9.04□□□□□ -0.96
TVP23A-207ENST00000573360 IGLV6-57P01721 117 aa9.04□□□□□ -0.96
TVP23A-207ENST00000573360 SERTAD4-AS1Q5TG53 156 aa9.04□□□□□ -0.96
TVP23A-207ENST00000573360 ATP5EP2Q5VTU8 51 aa9.04□□□□□ -0.96
TVP23A-207ENST00000573360 LINC01547P58512 204 aaPredicted RBP9.03□□□□□ -0.96
TVP23A-207ENST00000573360 SNURFQ9Y675 71 aa9.01□□□□□ -0.97
TVP23A-207ENST00000573360 KRTAP21-3Q3LHN1 58 aa9□□□□□ -0.97
TVP23A-207ENST00000573360 A0A096LNI7 61 aa9□□□□□ -0.97
TVP23A-207ENST00000573360 C3orf84H3BNL1 204 aa8.99□□□□□ -0.97
TVP23A-207ENST00000573360 M0R378 163 aa8.99□□□□□ -0.97
TVP23A-207ENST00000573360 TMEM258P61165 79 aa8.99□□□□□ -0.97
TVP23A-207ENST00000573360 C1orf134Q5TEV5 83 aa8.99□□□□□ -0.97
TVP23A-207ENST00000573360 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.98□□□□□ -0.97
TVP23A-207ENST00000573360 Q8N9L7 120 aa8.98□□□□□ -0.97
TVP23A-207ENST00000573360 VPREB1P12018 145 aa8.97□□□□□ -0.97
TVP23A-207ENST00000573360 UBE2BP63146 152 aa8.97□□□□□ -0.97
TVP23A-207ENST00000573360 PDE6GP18545 87 aa8.97□□□□□ -0.97
TVP23A-207ENST00000573360 C7orf33Q8WU49 177 aa8.96□□□□□ -0.98
TVP23A-207ENST00000573360 LOC110117498A0A087WWA1 95 aa8.95□□□□□ -0.98
TVP23A-207ENST00000573360 ELOF1P60002 83 aaKnown RBP8.95□□□□□ -0.98
TVP23A-207ENST00000573360 NREPQ16612 68 aa8.95□□□□□ -0.98
TVP23A-207ENST00000573360 LINC00476Q8WZB0 136 aa8.94□□□□□ -0.98
TVP23A-207ENST00000573360 SRRM2Q9UQ35 2752 aaKnown RBP8.94□□□□□ -0.98
TVP23A-207ENST00000573360 KMT2AQ03164 3969 aa8.94□□□□□ -0.98
TVP23A-207ENST00000573360 TNP2Q05952 138 aa8.93□□□□□ -0.98
TVP23A-207ENST00000573360 C14orf177Q52M58 125 aa8.93□□□□□ -0.98
TVP23A-207ENST00000573360 A0A1W2PNN7 141 aa8.92□□□□□ -0.98
TVP23A-207ENST00000573360 A0A087WTM6 91 aa8.92□□□□□ -0.98
TVP23A-207ENST00000573360 PHF5AQ7RTV0 110 aaKnown RBP8.92□□□□□ -0.98
TVP23A-207ENST00000573360 TRAV7A0A075B6U4 112 aa8.91□□□□□ -0.98
TVP23A-207ENST00000573360 H3BQ85 93 aa8.91□□□□□ -0.98
TVP23A-207ENST00000573360 ETDCA0A1B0GVM5 59 aa8.9□□□□□ -0.98
TVP23A-207ENST00000573360 LRCOL1A6NCL2 159 aa8.9□□□□□ -0.98
TVP23A-207ENST00000573360 PANO1I0J062 215 aa8.9□□□□□ -0.98
TVP23A-207ENST00000573360 FAM236DA0A1B0GTK5 79 aa8.9□□□□□ -0.98
TVP23A-207ENST00000573360 FAM236CP0DP71 79 aa8.9□□□□□ -0.98
TVP23A-207ENST00000573360 HIGD2AQ9BW72 106 aa8.9□□□□□ -0.98
TVP23A-207ENST00000573360 MRPL55Q7Z7F7 128 aaKnown RBP8.9□□□□□ -0.99
TVP23A-207ENST00000573360 IGLV5-52A0A0A0MRZ9 124 aa8.89□□□□□ -0.99
TVP23A-207ENST00000573360 PRLHP81277 87 aa8.89□□□□□ -0.99
TVP23A-207ENST00000573360 RTL8CO15255 209 aa8.88□□□□□ -0.99
TVP23A-207ENST00000573360 Q6ZRN7 208 aaPredicted RBP8.88□□□□□ -0.99
TVP23A-207ENST00000573360 LINC00528Q8N1L1 170 aa8.88□□□□□ -0.99
TVP23A-207ENST00000573360 TRBV7-4A0A0J9YYF1 115 aa8.88□□□□□ -0.99
TVP23A-207ENST00000573360 F8WEM9 126 aa8.87□□□□□ -0.99
TVP23A-207ENST00000573360 BPY2O14599 106 aa8.87□□□□□ -0.99
TVP23A-207ENST00000573360 CXCL6P80162 114 aa8.86□□□□□ -0.99
TVP23A-207ENST00000573360 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.86□□□□□ -0.99
TVP23A-207ENST00000573360 DNAH1Q9P2D7 4330 aa8.86□□□□□ -0.99
TVP23A-207ENST00000573360 C16orf90A8MZG2 172 aa8.85□□□□□ -0.99
TVP23A-207ENST00000573360 KRTAP7-1Q8IUC3 87 aa8.85□□□□□ -0.99
TVP23A-207ENST00000573360 C9orf163Q8N9P6 203 aa8.85□□□□□ -0.99
TVP23A-207ENST00000573360 HRCT1Q6UXD1 115 aa8.85□□□□□ -0.99
TVP23A-207ENST00000573360 RPS28P62857 69 aaKnown RBP8.84□□□□□ -0.99
TVP23A-207ENST00000573360 C4orf26Q17RF5 130 aa8.84□□□□□ -0.99
TVP23A-207ENST00000573360 Q6ZR54 194 aa8.84□□□□□ -0.99
TVP23A-207ENST00000573360 OXTP01178 125 aa8.84□□□□□ -0.99
TVP23A-207ENST00000573360 ST20-AS1Q8NBB2 130 aa8.83□□□□□ -1
TVP23A-207ENST00000573360 CNBPP62633 177 aaKnown RBP8.83□□□□□ -1
TVP23A-207ENST00000573360 TRBV7-6A0A0J9YX20 115 aa8.82□□□□□ -1
TVP23A-207ENST00000573360 F8WDY8 70 aa8.81□□□□□ -1
TVP23A-207ENST00000573360 TLX1NBP0CAT3 122 aa8.81□□□□□ -1
TVP23A-207ENST00000573360 KRTAP10-2P60368 255 aa8.81□□□□□ -1
TVP23A-207ENST00000573360 Q8N377 158 aa8.8□□□□□ -1
TVP23A-207ENST00000573360 H7BZZ5 65 aa8.8□□□□□ -1
TVP23A-207ENST00000573360 IGLV1-50A0A075B6I6 118 aa8.79□□□□□ -1
TVP23A-207ENST00000573360 UBE2AP49459 152 aa8.79□□□□□ -1
TVP23A-207ENST00000573360 C1orf137Q5JT78 98 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms