RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 HIGD2AQ9BW72 106 aa5.14□□□□□ -1.59
TRAPPC1-203ENST00000571739 PPDPFQ9H3Y8 114 aa5.14□□□□□ -1.59
TRAPPC1-203ENST00000571739 ETDCA0A1B0GVM5 59 aa5.13□□□□□ -1.59
TRAPPC1-203ENST00000571739 ERC2-IT1O76042 136 aa5.13□□□□□ -1.59
TRAPPC1-203ENST00000571739 KRTAP13-2Q52LG2 175 aa5.13□□□□□ -1.59
TRAPPC1-203ENST00000571739 LINC00518Q8N0U6 118 aa5.13□□□□□ -1.59
TRAPPC1-203ENST00000571739 Q9BRP9 147 aa5.13□□□□□ -1.59
TRAPPC1-203ENST00000571739 TRAV23DV6A0A075B6W5 121 aa5.12□□□□□ -1.59
TRAPPC1-203ENST00000571739 ZNF73O43830 326 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC1-203ENST00000571739 COX8AP10176 69 aa5.12□□□□□ -1.59
TRAPPC1-203ENST00000571739 CRYGAP11844 174 aa5.12□□□□□ -1.59
TRAPPC1-203ENST00000571739 OR13C6PQ8NH95 151 aa5.12□□□□□ -1.59
TRAPPC1-203ENST00000571739 C14orf144Q96I85 54 aa5.12□□□□□ -1.59
TRAPPC1-203ENST00000571739 TMA7Q9Y2S6 64 aaKnown RBP5.12□□□□□ -1.59
TRAPPC1-203ENST00000571739 DLEU1O43261 78 aa5.11□□□□□ -1.59
TRAPPC1-203ENST00000571739 S100A12P80511 92 aa5.11□□□□□ -1.59
TRAPPC1-203ENST00000571739 FAM229BQ4G0N7 80 aa5.11□□□□□ -1.59
TRAPPC1-203ENST00000571739 PYY3Q5JQD4 70 aa5.11□□□□□ -1.59
TRAPPC1-203ENST00000571739 Q6ZRX8 168 aa5.11□□□□□ -1.59
TRAPPC1-203ENST00000571739 SPRR4Q96PI1 79 aa5.11□□□□□ -1.59
TRAPPC1-203ENST00000571739 PAM16Q9Y3D7 125 aa5.11□□□□□ -1.59
TRAPPC1-203ENST00000571739 RPL13AP40429 203 aaKnown RBP5.1□□□□□ -1.59
TRAPPC1-203ENST00000571739 SPATA45Q537H7 98 aa5.1□□□□□ -1.59
TRAPPC1-203ENST00000571739 C3orf22Q8N5N4 141 aa5.09□□□□□ -1.59
TRAPPC1-203ENST00000571739 TYMSOSQ8TAI1 123 aa5.09□□□□□ -1.59
TRAPPC1-203ENST00000571739 COPS9Q8WXC6 57 aa5.09□□□□□ -1.59
TRAPPC1-203ENST00000571739 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.6
TRAPPC1-203ENST00000571739 A4D1N5 150 aa5.08□□□□□ -1.6
TRAPPC1-203ENST00000571739 A6NDN8 102 aa5.08□□□□□ -1.6
TRAPPC1-203ENST00000571739 C6orf99Q4VX62 202 aa5.08□□□□□ -1.6
TRAPPC1-203ENST00000571739 VAMP8Q9BV40 100 aa5.08□□□□□ -1.6
TRAPPC1-203ENST00000571739 LINC00483Q53H64 154 aa5.07□□□□□ -1.6
TRAPPC1-203ENST00000571739 GAGE2AQ6NT46 116 aa5.07□□□□□ -1.6
TRAPPC1-203ENST00000571739 C2orf91Q6ZV80 131 aa5.07□□□□□ -1.6
TRAPPC1-203ENST00000571739 ST20-AS1Q8NBB2 130 aa5.07□□□□□ -1.6
TRAPPC1-203ENST00000571739 CBY1Q9Y3M2 126 aa5.07□□□□□ -1.6
TRAPPC1-203ENST00000571739 TRAV13-2A0A0B4J235 113 aa5.06□□□□□ -1.6
TRAPPC1-203ENST00000571739 HINT1P49773 126 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC1-203ENST00000571739 ELOF1P60002 83 aaKnown RBP5.06□□□□□ -1.6
TRAPPC1-203ENST00000571739 SLC25A34Q6PIV7 304 aa5.06□□□□□ -1.6
TRAPPC1-203ENST00000571739 SMIM11BQ8TCY0 68 aa5.06□□□□□ -1.6
TRAPPC1-203ENST00000571739 HIST1H4GQ99525 98 aa5.06□□□□□ -1.6
TRAPPC1-203ENST00000571739 HIGD1BQ9P298 99 aa5.06□□□□□ -1.6
TRAPPC1-203ENST00000571739 ZNF706Q9Y5V0 76 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC1-203ENST00000571739 TSPAN13O95857 204 aa5.05□□□□□ -1.6
TRAPPC1-203ENST00000571739 COX7BP24311 80 aa5.05□□□□□ -1.6
TRAPPC1-203ENST00000571739 TRBV7-6A0A0J9YX20 115 aa5.04□□□□□ -1.6
TRAPPC1-203ENST00000571739 CFC1BP0CG36 223 aa5.03□□□□□ -1.6
TRAPPC1-203ENST00000571739 CFC1P0CG37 223 aa5.03□□□□□ -1.6
TRAPPC1-203ENST00000571739 C12orf57Q99622 126 aa5.03□□□□□ -1.6
TRAPPC1-203ENST00000571739 DHRS4-AS1Q9P1J3 65 aa5.03□□□□□ -1.6
TRAPPC1-203ENST00000571739 A0A1B0GWB2 263 aa5.02□□□□□ -1.61
TRAPPC1-203ENST00000571739 SPRR1BP22528 89 aa5.02□□□□□ -1.61
TRAPPC1-203ENST00000571739 LINC00304Q8N9R0 145 aa5.02□□□□□ -1.61
TRAPPC1-203ENST00000571739 TAL2Q16559 108 aa5.01□□□□□ -1.61
TRAPPC1-203ENST00000571739 CEND1Q8N111 149 aa5.01□□□□□ -1.61
TRAPPC1-203ENST00000571739 IGLV9-49A0A0B4J1Y8 123 aa5□□□□□ -1.61
TRAPPC1-203ENST00000571739 LINC01547P58512 204 aaPredicted RBP5□□□□□ -1.61
TRAPPC1-203ENST00000571739 MOBPQ13875 183 aa5□□□□□ -1.61
TRAPPC1-203ENST00000571739 SSBP3-AS1Q7Z2R9 100 aa5□□□□□ -1.61
TRAPPC1-203ENST00000571739 Q8NBF4 154 aa5□□□□□ -1.61
TRAPPC1-203ENST00000571739 FXYD2P54710 66 aa4.99□□□□□ -1.61
TRAPPC1-203ENST00000571739 LINC00575Q6W349 94 aa4.99□□□□□ -1.61
TRAPPC1-203ENST00000571739 SMIM29Q86T20 159 aa4.99□□□□□ -1.61
TRAPPC1-203ENST00000571739 DEFB105AQ8NG35 78 aa4.99□□□□□ -1.61
TRAPPC1-203ENST00000571739 IGLV5-48A0A075B6I7 105 aa4.98□□□□□ -1.61
TRAPPC1-203ENST00000571739 A0A0B4J2C4 111 aa4.98□□□□□ -1.61
TRAPPC1-203ENST00000571739 CTAG1AP78358 180 aa4.98□□□□□ -1.61
TRAPPC1-203ENST00000571739 VAMP3Q15836 100 aa4.98□□□□□ -1.61
TRAPPC1-203ENST00000571739 SPAG11AQ6PDA7 123 aa4.98□□□□□ -1.61
TRAPPC1-203ENST00000571739 RETNLBQ9BQ08 111 aa4.98□□□□□ -1.61
TRAPPC1-203ENST00000571739 LPAP08519 4548 aa4.98□□□□□ -1.61
TRAPPC1-203ENST00000571739 TEX49A0A1B0GTD5 131 aa4.97□□□□□ -1.61
TRAPPC1-203ENST00000571739 PRR4Q16378 134 aa4.97□□□□□ -1.61
TRAPPC1-203ENST00000571739 Q8N377 158 aa4.97□□□□□ -1.61
TRAPPC1-203ENST00000571739 UQCR10Q9UDW1 63 aa4.97□□□□□ -1.61
TRAPPC1-203ENST00000571739 H7C2G1 150 aa4.96□□□□□ -1.62
TRAPPC1-203ENST00000571739 C4orf48Q5BLP8 95 aa4.96□□□□□ -1.62
TRAPPC1-203ENST00000571739 RAB37Q96AX2 223 aa4.96□□□□□ -1.62
TRAPPC1-203ENST00000571739 PRO1854Q9UHT4 67 aa4.96□□□□□ -1.62
TRAPPC1-203ENST00000571739 LRP2P98164 4655 aa4.95□□□□□ -1.62
TRAPPC1-203ENST00000571739 LOC105371267A0A1B0GV96 52 aa4.95□□□□□ -1.62
TRAPPC1-203ENST00000571739 hADV29S1A0JD25 119 aa4.95□□□□□ -1.62
TRAPPC1-203ENST00000571739 SPINK1P00995 79 aa4.95□□□□□ -1.62
TRAPPC1-203ENST00000571739 HSD52Q0P140 79 aa4.95□□□□□ -1.62
TRAPPC1-203ENST00000571739 Q1RN00 199 aa4.95□□□□□ -1.62
TRAPPC1-203ENST00000571739 BVES-AS1Q5T3Y7 98 aa4.95□□□□□ -1.62
TRAPPC1-203ENST00000571739 C9orf153Q5TBE3 101 aa4.95□□□□□ -1.62
TRAPPC1-203ENST00000571739 PRO1933Q9H354 126 aa4.95□□□□□ -1.62
TRAPPC1-203ENST00000571739 NHP2Q9NX24 153 aaKnown RBP4.95□□□□□ -1.62
TRAPPC1-203ENST00000571739 LAMTOR3Q9UHA4 124 aa4.95□□□□□ -1.62
TRAPPC1-203ENST00000571739 UBR4Q5T4S7 5183 aa4.94□□□□□ -1.62
TRAPPC1-203ENST00000571739 SLC25A20O43772 301 aa4.94□□□□□ -1.62
TRAPPC1-203ENST00000571739 FAM218AQ96MZ4 157 aa4.94□□□□□ -1.62
TRAPPC1-203ENST00000571739 A0A0G2JQZ4 141 aa4.93□□□□□ -1.62
TRAPPC1-203ENST00000571739 TMEM238LA0A1B0GVL6 79 aa4.93□□□□□ -1.62
TRAPPC1-203ENST00000571739 A6NJY4 79 aa4.93□□□□□ -1.62
TRAPPC1-203ENST00000571739 Q6ZQY7 126 aa4.93□□□□□ -1.62
TRAPPC1-203ENST00000571739 H0YGX0 51 aa4.92□□□□□ -1.62
TRAPPC1-203ENST00000571739 K7ERJ3 54 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms