RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 MYMXA0A1B0GTQ4 84 aa7.23□□□□□ -1.25
CTDNEP1-205ENST00000570828 SERF1AO75920 110 aa7.23□□□□□ -1.25
CTDNEP1-205ENST00000570828 LEPROTL1O95214 131 aa7.23□□□□□ -1.25
CTDNEP1-205ENST00000570828 LINC00304Q8N9R0 145 aa7.23□□□□□ -1.25
CTDNEP1-205ENST00000570828 MAP1LC3CQ9BXW4 147 aa7.23□□□□□ -1.25
CTDNEP1-205ENST00000570828 CBY1Q9Y3M2 126 aa7.23□□□□□ -1.25
CTDNEP1-205ENST00000570828 NCR3O14931 201 aa7.22□□□□□ -1.25
CTDNEP1-205ENST00000570828 PLNP26678 52 aa7.22□□□□□ -1.25
CTDNEP1-205ENST00000570828 PLEKHB2Q96CS7 222 aa7.22□□□□□ -1.25
CTDNEP1-205ENST00000570828 HSPB8Q9UJY1 196 aa7.22□□□□□ -1.25
CTDNEP1-205ENST00000570828 HERVK_113P61574 105 aa7.2□□□□□ -1.26
CTDNEP1-205ENST00000570828 ZNF706Q9Y5V0 76 aaPredicted RBP7.2□□□□□ -1.26
CTDNEP1-205ENST00000570828 LEPROTO15243 131 aa7.19□□□□□ -1.26
CTDNEP1-205ENST00000570828 DPM2O94777 84 aa7.19□□□□□ -1.26
CTDNEP1-205ENST00000570828 FABP4P15090 132 aa7.19□□□□□ -1.26
CTDNEP1-205ENST00000570828 TSPEAR-AS2P59090 65 aa7.19□□□□□ -1.26
CTDNEP1-205ENST00000570828 ETDCA0A1B0GVM5 59 aa7.18□□□□□ -1.26
CTDNEP1-205ENST00000570828 LINC00337Q8N6G1 96 aa7.18□□□□□ -1.26
CTDNEP1-205ENST00000570828 SPRR4Q96PI1 79 aa7.18□□□□□ -1.26
CTDNEP1-205ENST00000570828 KCNQ1DNQ9H478 68 aa7.18□□□□□ -1.26
CTDNEP1-205ENST00000570828 J3QQQ9 107 aa7.17□□□□□ -1.26
CTDNEP1-205ENST00000570828 LGALS3P17931 250 aaKnown RBP7.17□□□□□ -1.26
CTDNEP1-205ENST00000570828 NMUP48645 174 aa7.17□□□□□ -1.26
CTDNEP1-205ENST00000570828 C3orf22Q8N5N4 141 aa7.17□□□□□ -1.26
CTDNEP1-205ENST00000570828 DAND5Q8N907 189 aa7.17□□□□□ -1.26
CTDNEP1-205ENST00000570828 RETNLBQ9BQ08 111 aa7.17□□□□□ -1.26
CTDNEP1-205ENST00000570828 PMCHL2Q9BQD1 86 aa7.17□□□□□ -1.26
CTDNEP1-205ENST00000570828 MIEN1Q9BRT3 115 aa7.17□□□□□ -1.26
CTDNEP1-205ENST00000570828 TRBV10-3A0A0K0K1G6 114 aa7.16□□□□□ -1.26
CTDNEP1-205ENST00000570828 IGKCP01834 107 aa7.16□□□□□ -1.26
CTDNEP1-205ENST00000570828 DDTP30046 118 aa7.16□□□□□ -1.26
CTDNEP1-205ENST00000570828 SPRR1AP35321 89 aa7.16□□□□□ -1.26
CTDNEP1-205ENST00000570828 SPANXB1Q9NS25 103 aaPredicted RBP7.14□□□□□ -1.27
CTDNEP1-205ENST00000570828 LOC107984156A0A0G2JMH3 177 aa7.13□□□□□ -1.27
CTDNEP1-205ENST00000570828 TRBV10-2A0A0K0K1G8 114 aa7.13□□□□□ -1.27
CTDNEP1-205ENST00000570828 KRTAP4-16G5E9R7 235 aaPredicted RBP7.13□□□□□ -1.27
CTDNEP1-205ENST00000570828 JOSD1Q15040 202 aaPredicted RBP7.13□□□□□ -1.27
CTDNEP1-205ENST00000570828 SPAG11AQ6PDA7 123 aa7.13□□□□□ -1.27
CTDNEP1-205ENST00000570828 ARL17AQ8IVW1 177 aa7.13□□□□□ -1.27
CTDNEP1-205ENST00000570828 HIST3H2BBQ8N257 126 aa7.13□□□□□ -1.27
CTDNEP1-205ENST00000570828 SMCR5Q8TEV8 140 aa7.13□□□□□ -1.27
CTDNEP1-205ENST00000570828 MUC2Q02817 5179 aa7.13□□□□□ -1.27
CTDNEP1-205ENST00000570828 PYY3Q5JQD4 70 aa7.12□□□□□ -1.27
CTDNEP1-205ENST00000570828 COA6Q5JTJ3 125 aaKnown RBP7.12□□□□□ -1.27
CTDNEP1-205ENST00000570828 PPDPFQ9H3Y8 114 aa7.12□□□□□ -1.27
CTDNEP1-205ENST00000570828 IGLV7-46A0A075B6I9 117 aa7.11□□□□□ -1.27
CTDNEP1-205ENST00000570828 HIST1H2BKO60814 126 aa7.11□□□□□ -1.27
CTDNEP1-205ENST00000570828 HIST1H2BJP06899 126 aa7.11□□□□□ -1.27
CTDNEP1-205ENST00000570828 HIST1H2BOP23527 126 aa7.11□□□□□ -1.27
CTDNEP1-205ENST00000570828 HIST1H2BBP33778 126 aa7.11□□□□□ -1.27
CTDNEP1-205ENST00000570828 HIST1H2BDP58876 126 aa7.11□□□□□ -1.27
CTDNEP1-205ENST00000570828 HIST1H2BCP62807 126 aa7.11□□□□□ -1.27
CTDNEP1-205ENST00000570828 HIST2H2BEQ16778 126 aa7.11□□□□□ -1.27
CTDNEP1-205ENST00000570828 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.11□□□□□ -1.27
CTDNEP1-205ENST00000570828 S100A7L2Q5SY68 101 aa7.11□□□□□ -1.27
CTDNEP1-205ENST00000570828 HIST1H2BHQ93079 126 aa7.11□□□□□ -1.27
CTDNEP1-205ENST00000570828 HIST1H2BNQ99877 126 aa7.11□□□□□ -1.27
CTDNEP1-205ENST00000570828 HIST1H2BMQ99879 126 aa7.11□□□□□ -1.27
CTDNEP1-205ENST00000570828 A0A0U1RQV1 116 aa7.1□□□□□ -1.27
CTDNEP1-205ENST00000570828 NDUFC2O95298 119 aa7.1□□□□□ -1.27
CTDNEP1-205ENST00000570828 TPRXLQ17RH7 258 aa7.1□□□□□ -1.27
CTDNEP1-205ENST00000570828 Q8NBF4 154 aa7.1□□□□□ -1.27
CTDNEP1-205ENST00000570828 C14orf144Q96I85 54 aa7.1□□□□□ -1.27
CTDNEP1-205ENST00000570828 A0A0J9YXY3 114 aa7.09□□□□□ -1.27
CTDNEP1-205ENST00000570828 E9PLD3 99 aa7.09□□□□□ -1.27
CTDNEP1-205ENST00000570828 M0R143 59 aa7.09□□□□□ -1.27
CTDNEP1-205ENST00000570828 LINC00483Q53H64 154 aa7.09□□□□□ -1.27
CTDNEP1-205ENST00000570828 Q75L30 129 aa7.09□□□□□ -1.27
CTDNEP1-205ENST00000570828 TRAV23DV6A0A075B6W5 121 aa7.08□□□□□ -1.28
CTDNEP1-205ENST00000570828 SYS1-DBNDD2H3BUS1 97 aa7.08□□□□□ -1.28
CTDNEP1-205ENST00000570828 IGLV6-57P01721 117 aa7.08□□□□□ -1.28
CTDNEP1-205ENST00000570828 NPC2P61916 151 aa7.08□□□□□ -1.28
CTDNEP1-205ENST00000570828 Q6ZRX8 168 aa7.08□□□□□ -1.28
CTDNEP1-205ENST00000570828 HIST1H2BLQ99880 126 aa7.07□□□□□ -1.28
CTDNEP1-205ENST00000570828 IGLV9-49A0A0B4J1Y8 123 aa7.06□□□□□ -1.28
CTDNEP1-205ENST00000570828 ERC2-IT1O76042 136 aa7.06□□□□□ -1.28
CTDNEP1-205ENST00000570828 MOBPQ13875 183 aa7.06□□□□□ -1.28
CTDNEP1-205ENST00000570828 ADAMTSL4-AS1Q5T5F5 129 aa7.06□□□□□ -1.28
CTDNEP1-205ENST00000570828 SOSTDC1Q6X4U4 206 aa7.06□□□□□ -1.28
CTDNEP1-205ENST00000570828 FP248Q71RG6 208 aaPredicted RBP7.06□□□□□ -1.28
CTDNEP1-205ENST00000570828 Q9BRP9 147 aa7.06□□□□□ -1.28
CTDNEP1-205ENST00000570828 ZNF73O43830 326 aaPredicted RBP7.05□□□□□ -1.28
CTDNEP1-205ENST00000570828 SPINK1P00995 79 aa7.05□□□□□ -1.28
CTDNEP1-205ENST00000570828 LINC01545Q5VT33 79 aa7.05□□□□□ -1.28
CTDNEP1-205ENST00000570828 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
CTDNEP1-205ENST00000570828 A0A1B0GV90 55 aa7.03□□□□□ -1.28
CTDNEP1-205ENST00000570828 HINT1P49773 126 aaPredicted RBP7.03□□□□□ -1.28
CTDNEP1-205ENST00000570828 SPANXCQ9NY87 97 aa7.03□□□□□ -1.28
CTDNEP1-205ENST00000570828 ZNF815PA8K554 130 aa7.02□□□□□ -1.29
CTDNEP1-205ENST00000570828 TIMM17BO60830 172 aa7.02□□□□□ -1.29
CTDNEP1-205ENST00000570828 VAMP3Q15836 100 aa7.02□□□□□ -1.29
CTDNEP1-205ENST00000570828 SSBP3-AS1Q7Z2R9 100 aa7.02□□□□□ -1.29
CTDNEP1-205ENST00000570828 LINC00308Q8TCZ7 52 aa7.02□□□□□ -1.29
CTDNEP1-205ENST00000570828 LITAFQ99732 161 aa7.02□□□□□ -1.29
CTDNEP1-205ENST00000570828 C9orf153Q5TBE3 101 aa7.01□□□□□ -1.29
CTDNEP1-205ENST00000570828 OR13C6PQ8NH95 151 aa7.01□□□□□ -1.29
CTDNEP1-205ENST00000570828 RPS29P62273 56 aaKnown RBP7□□□□□ -1.29
CTDNEP1-205ENST00000570828 PRO1933Q9H354 126 aa7□□□□□ -1.29
CTDNEP1-205ENST00000570828 C3orf79P0CE67 100 aa6.99□□□□□ -1.29
CTDNEP1-205ENST00000570828 KRTDAPP60985 99 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms