RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 HIGD2BQ4VC39 106 aa10.27□□□□□ -0.76
SMG6-207ENST00000570756 LINC00528Q8N1L1 170 aa10.27□□□□□ -0.76
SMG6-207ENST00000570756 CELA1Q9UNI1 258 aa10.27□□□□□ -0.76
SMG6-207ENST00000570756 VPREB1P12018 145 aa10.27□□□□□ -0.77
SMG6-207ENST00000570756 FAM229BQ4G0N7 80 aa10.26□□□□□ -0.77
SMG6-207ENST00000570756 MPLKIPQ8TAP9 179 aa10.26□□□□□ -0.77
SMG6-207ENST00000570756 FBN1P35555 2871 aaKnown RBP10.24□□□□□ -0.77
SMG6-207ENST00000570756 DEFB4AO15263 64 aa10.23□□□□□ -0.77
SMG6-207ENST00000570756 Q6ZTC4 211 aa10.23□□□□□ -0.77
SMG6-207ENST00000570756 CAMK2N2Q96S95 79 aa10.23□□□□□ -0.77
SMG6-207ENST00000570756 EGFEM1PQ0D2K5 195 aa10.22□□□□□ -0.77
SMG6-207ENST00000570756 HIGD2AQ9BW72 106 aa10.22□□□□□ -0.77
SMG6-207ENST00000570756 NBEAL2Q6ZNJ1 2754 aa10.22□□□□□ -0.77
SMG6-207ENST00000570756 C3orf84H3BNL1 204 aa10.21□□□□□ -0.77
SMG6-207ENST00000570756 C1orf195Q5TG92 126 aa10.21□□□□□ -0.77
SMG6-207ENST00000570756 F8WDY8 70 aa10.21□□□□□ -0.78
SMG6-207ENST00000570756 DEFB135Q30KP9 77 aa10.21□□□□□ -0.78
SMG6-207ENST00000570756 A0A1B0GW54 56 aa10.19□□□□□ -0.78
SMG6-207ENST00000570756 COL6A5A8TX70 2615 aa10.19□□□□□ -0.78
SMG6-207ENST00000570756 STAB1Q9NY15 2570 aa10.18□□□□□ -0.78
SMG6-207ENST00000570756 VWFP04275 2813 aa10.18□□□□□ -0.78
SMG6-207ENST00000570756 HTN3P15516 51 aa10.17□□□□□ -0.78
SMG6-207ENST00000570756 APOC4P55056 127 aa10.17□□□□□ -0.78
SMG6-207ENST00000570756 IGLV5-48A0A075B6I7 105 aa10.15□□□□□ -0.78
SMG6-207ENST00000570756 SPART-AS1P0CW21 52 aa10.15□□□□□ -0.78
SMG6-207ENST00000570756 KPRPQ5T749 579 aaPredicted RBP10.15□□□□□ -0.78
SMG6-207ENST00000570756 SMIM29Q86T20 159 aa10.15□□□□□ -0.78
SMG6-207ENST00000570756 V9GYY9 64 aa10.15□□□□□ -0.78
SMG6-207ENST00000570756 LCE6AA0A183 80 aa10.15□□□□□ -0.79
SMG6-207ENST00000570756 Q6ZRU5 148 aa10.15□□□□□ -0.79
SMG6-207ENST00000570756 FAM30AQ9NZY2 134 aa10.15□□□□□ -0.79
SMG6-207ENST00000570756 hDV103S1A0JD37 113 aa10.14□□□□□ -0.79
SMG6-207ENST00000570756 DEFB105AQ8NG35 78 aa10.13□□□□□ -0.79
SMG6-207ENST00000570756 Q8NAQ8 132 aa10.13□□□□□ -0.79
SMG6-207ENST00000570756 TRRAPQ9Y4A5 3859 aa10.13□□□□□ -0.79
SMG6-207ENST00000570756 Q8N377 158 aa10.12□□□□□ -0.79
SMG6-207ENST00000570756 KCNQ1DNQ9H478 68 aa10.11□□□□□ -0.79
SMG6-207ENST00000570756 NKAPP1Q8N9T2 125 aa10.1□□□□□ -0.79
SMG6-207ENST00000570756 Q1T7F1 81 aa10.09□□□□□ -0.79
SMG6-207ENST00000570756 DHRS4-AS1Q9P1J3 65 aa10.09□□□□□ -0.79
SMG6-207ENST00000570756 Q6ZRP5 223 aa10.08□□□□□ -0.8
SMG6-207ENST00000570756 C15orf56Q8N910 161 aa10.08□□□□□ -0.8
SMG6-207ENST00000570756 ETDCA0A1B0GVM5 59 aa10.07□□□□□ -0.8
SMG6-207ENST00000570756 KRTAP26-1Q6PEX3 210 aa10.07□□□□□ -0.8
SMG6-207ENST00000570756 PRR15Q8IV56 129 aa10.07□□□□□ -0.8
SMG6-207ENST00000570756 C1orf64Q8NEQ6 169 aa10.07□□□□□ -0.8
SMG6-207ENST00000570756 PKD1L1Q8TDX9 2849 aa10.07□□□□□ -0.8
SMG6-207ENST00000570756 A0A1W2PNM2 257 aa10.06□□□□□ -0.8
SMG6-207ENST00000570756 ZCCHC13Q8WW36 166 aaKnown RBP10.06□□□□□ -0.8
SMG6-207ENST00000570756 C1orf137Q5JT78 98 aa10.06□□□□□ -0.8
SMG6-207ENST00000570756 Q8NBF4 154 aa10.05□□□□□ -0.8
SMG6-207ENST00000570756 WFDC10BQ8IUB3 73 aa10.05□□□□□ -0.8
SMG6-207ENST00000570756 KRTAP10-3P60369 221 aa10.04□□□□□ -0.8
SMG6-207ENST00000570756 C7orf33Q8WU49 177 aa10.04□□□□□ -0.8
SMG6-207ENST00000570756 Q6ZRX8 168 aa10.03□□□□□ -0.8
SMG6-207ENST00000570756 SEC61GP60059 68 aa10.03□□□□□ -0.8
SMG6-207ENST00000570756 TNP2Q05952 138 aa10.03□□□□□ -0.8
SMG6-207ENST00000570756 SYCNQ0VAF6 134 aa10.03□□□□□ -0.8
SMG6-207ENST00000570756 SPRR4Q96PI1 79 aa10.03□□□□□ -0.8
SMG6-207ENST00000570756 CYP4F30PQ9H0H9 118 aa10.02□□□□□ -0.81
SMG6-207ENST00000570756 LRCOL1A6NCL2 159 aa10.01□□□□□ -0.81
SMG6-207ENST00000570756 DSCR10P59022 87 aa10.01□□□□□ -0.81
SMG6-207ENST00000570756 IGLV2-33A0A075B6J2 118 aaPredicted RBP10□□□□□ -0.81
SMG6-207ENST00000570756 NDUFB1O75438 58 aa10□□□□□ -0.81
SMG6-207ENST00000570756 SERTAD4-AS1Q5TG53 156 aa10□□□□□ -0.81
SMG6-207ENST00000570756 H3BNG1 76 aa9.99□□□□□ -0.81
SMG6-207ENST00000570756 K7EQZ3 153 aa9.99□□□□□ -0.81
SMG6-207ENST00000570756 KRTAP24-1Q3LI83 254 aa9.99□□□□□ -0.81
SMG6-207ENST00000570756 HCG22E2RYF7 251 aa9.98□□□□□ -0.81
SMG6-207ENST00000570756 Q9BRP9 147 aa9.98□□□□□ -0.81
SMG6-207ENST00000570756 PLA2G2DQ9UNK4 145 aa9.97□□□□□ -0.81
SMG6-207ENST00000570756 IGKV2D-24A0A075B6R9 120 aa9.96□□□□□ -0.81
SMG6-207ENST00000570756 TRAV22A0A0B4J277 110 aa9.96□□□□□ -0.82
SMG6-207ENST00000570756 KRTAP4-16G5E9R7 235 aaPredicted RBP9.96□□□□□ -0.82
SMG6-207ENST00000570756 PSPHP1O15172 72 aa9.95□□□□□ -0.82
SMG6-207ENST00000570756 SPRR1AP35321 89 aa9.95□□□□□ -0.82
SMG6-207ENST00000570756 PMAIP1Q13794 54 aa9.95□□□□□ -0.82
SMG6-207ENST00000570756 RPL37AP8A6NKH3 93 aa9.94□□□□□ -0.82
SMG6-207ENST00000570756 ST20-AS1Q8NBB2 130 aa9.94□□□□□ -0.82
SMG6-207ENST00000570756 IGLV1-50A0A075B6I6 118 aa9.94□□□□□ -0.82
SMG6-207ENST00000570756 TLX1NBP0CAT3 122 aa9.94□□□□□ -0.82
SMG6-207ENST00000570756 MP68P56378 58 aa9.93□□□□□ -0.82
SMG6-207ENST00000570756 ANK2Q01484 3957 aa9.92□□□□□ -0.82
SMG6-207ENST00000570756 IGLV5-37A0A075B6J1 123 aa9.92□□□□□ -0.82
SMG6-207ENST00000570756 PSCAO43653 123 aa9.92□□□□□ -0.82
SMG6-207ENST00000570756 LINC01556Q5JQF7 62 aa9.91□□□□□ -0.82
SMG6-207ENST00000570756 PRR4Q16378 134 aa9.91□□□□□ -0.82
SMG6-207ENST00000570756 NOTCH1P46531 2555 aa9.89□□□□□ -0.83
SMG6-207ENST00000570756 UBE2BP63146 152 aa9.88□□□□□ -0.83
SMG6-207ENST00000570756 CMYA5Q8N3K9 4069 aa9.88□□□□□ -0.83
SMG6-207ENST00000570756 LINC00476Q8WZB0 136 aa9.87□□□□□ -0.83
SMG6-207ENST00000570756 MDFIQ99750 246 aa9.87□□□□□ -0.83
SMG6-207ENST00000570756 NBEAL1Q6ZS30 2694 aa9.87□□□□□ -0.83
SMG6-207ENST00000570756 B9D2Q9BPU9 175 aa9.86□□□□□ -0.83
SMG6-207ENST00000570756 FAM168BA1KXE4 195 aa9.86□□□□□ -0.83
SMG6-207ENST00000570756 MGAM2Q2M2H8 2515 aa9.85□□□□□ -0.83
SMG6-207ENST00000570756 DNHD1Q96M86 4753 aa9.85□□□□□ -0.83
SMG6-207ENST00000570756 A8MUN3 132 aa9.84□□□□□ -0.83
SMG6-207ENST00000570756 MRPL55Q7Z7F7 128 aaKnown RBP9.84□□□□□ -0.83
SMG6-207ENST00000570756 WFDC13Q8IUB5 93 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms