RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 TRAPPC1Q9Y5R8 145 aa3.68□□□□□ -1.82
SMG6-204ENST00000570606 SMIM13P0DJ93 91 aa3.67□□□□□ -1.82
SMG6-204ENST00000570606 S100A12P80511 92 aa3.67□□□□□ -1.82
SMG6-204ENST00000570606 KRTAP13-3Q3SY46 172 aa3.67□□□□□ -1.82
SMG6-204ENST00000570606 COMMD7Q86VX2 200 aa3.67□□□□□ -1.82
SMG6-204ENST00000570606 FAM19A2Q8N3H0 131 aa3.67□□□□□ -1.82
SMG6-204ENST00000570606 TMEM223A0PJW6 202 aa3.66□□□□□ -1.82
SMG6-204ENST00000570606 SPINK1P00995 79 aa3.66□□□□□ -1.82
SMG6-204ENST00000570606 MOBPQ13875 183 aa3.66□□□□□ -1.82
SMG6-204ENST00000570606 NDUFA5Q16718 116 aa3.66□□□□□ -1.82
SMG6-204ENST00000570606 ASB16-AS1Q495Z4 193 aa3.66□□□□□ -1.82
SMG6-204ENST00000570606 MIR7-3HGQ8N6C7 128 aa3.66□□□□□ -1.82
SMG6-204ENST00000570606 SMCR5Q8TEV8 140 aa3.66□□□□□ -1.82
SMG6-204ENST00000570606 FAM218AQ96MZ4 157 aa3.66□□□□□ -1.82
SMG6-204ENST00000570606 TRAV12-1A0A0B4J245 112 aa3.65□□□□□ -1.83
SMG6-204ENST00000570606 TRBV10-3A0A0K0K1G6 114 aa3.65□□□□□ -1.83
SMG6-204ENST00000570606 SPRR1AP35321 89 aa3.65□□□□□ -1.83
SMG6-204ENST00000570606 HERV-K104P63124 156 aa3.65□□□□□ -1.83
SMG6-204ENST00000570606 IFI27L1Q96BM0 104 aa3.65□□□□□ -1.83
SMG6-204ENST00000570606 MAP1LC3CQ9BXW4 147 aa3.65□□□□□ -1.83
SMG6-204ENST00000570606 KCNQ1DNQ9H478 68 aa3.65□□□□□ -1.83
SMG6-204ENST00000570606 LINC00587B1AMM8 73 aa3.64□□□□□ -1.83
SMG6-204ENST00000570606 H0Y8G0 127 aa3.64□□□□□ -1.83
SMG6-204ENST00000570606 S100A1P23297 94 aa3.64□□□□□ -1.83
SMG6-204ENST00000570606 LINC00483Q53H64 154 aa3.64□□□□□ -1.83
SMG6-204ENST00000570606 C9orf153Q5TBE3 101 aa3.64□□□□□ -1.83
SMG6-204ENST00000570606 NOTCH2NLQ7Z3S9 236 aa3.64□□□□□ -1.83
SMG6-204ENST00000570606 MYMXA0A1B0GTQ4 84 aa3.63□□□□□ -1.83
SMG6-204ENST00000570606 KRTAP4-16G5E9R7 235 aaPredicted RBP3.63□□□□□ -1.83
SMG6-204ENST00000570606 SLC25A20O43772 301 aa3.63□□□□□ -1.83
SMG6-204ENST00000570606 DDTP30046 118 aa3.63□□□□□ -1.83
SMG6-204ENST00000570606 C10orf91Q5T1B1 145 aa3.63□□□□□ -1.83
SMG6-204ENST00000570606 ADAMTSL4-AS1Q5T5F5 129 aa3.63□□□□□ -1.83
SMG6-204ENST00000570606 Q8N377 158 aa3.63□□□□□ -1.83
SMG6-204ENST00000570606 MIEN1Q9BRT3 115 aa3.63□□□□□ -1.83
SMG6-204ENST00000570606 ERC2-IT1O76042 136 aa3.62□□□□□ -1.83
SMG6-204ENST00000570606 CFC1BP0CG36 223 aa3.62□□□□□ -1.83
SMG6-204ENST00000570606 CFC1P0CG37 223 aa3.62□□□□□ -1.83
SMG6-204ENST00000570606 RPS29P62273 56 aaKnown RBP3.62□□□□□ -1.83
SMG6-204ENST00000570606 Q6ZRX8 168 aa3.62□□□□□ -1.83
SMG6-204ENST00000570606 SSBP3-AS1Q7Z2R9 100 aa3.62□□□□□ -1.83
SMG6-204ENST00000570606 CHCHD1Q96BP2 118 aaKnown RBP3.62□□□□□ -1.83
SMG6-204ENST00000570606 LITAFQ99732 161 aa3.62□□□□□ -1.83
SMG6-204ENST00000570606 KRTAP4-1Q9BYQ7 146 aa3.62□□□□□ -1.83
SMG6-204ENST00000570606 TRBV10-2A0A0K0K1G8 114 aa3.61□□□□□ -1.83
SMG6-204ENST00000570606 APOC3P02656 99 aa3.61□□□□□ -1.83
SMG6-204ENST00000570606 TSPEAR-AS2P59090 65 aa3.61□□□□□ -1.83
SMG6-204ENST00000570606 S100A7L2Q5SY68 101 aa3.61□□□□□ -1.83
SMG6-204ENST00000570606 Q9BRP9 147 aa3.61□□□□□ -1.83
SMG6-204ENST00000570606 SPANXB1Q9NS25 103 aaPredicted RBP3.61□□□□□ -1.83
SMG6-204ENST00000570606 TRAV23DV6A0A075B6W5 121 aa3.6□□□□□ -1.83
SMG6-204ENST00000570606 LEPROTO15243 131 aa3.6□□□□□ -1.83
SMG6-204ENST00000570606 HSBP1O75506 76 aa3.6□□□□□ -1.83
SMG6-204ENST00000570606 SNAPINO95295 136 aa3.6□□□□□ -1.83
SMG6-204ENST00000570606 HERVK_113P61574 105 aa3.6□□□□□ -1.83
SMG6-204ENST00000570606 JOSD1Q15040 202 aaPredicted RBP3.6□□□□□ -1.83
SMG6-204ENST00000570606 SVBPQ8N300 66 aa3.6□□□□□ -1.83
SMG6-204ENST00000570606 FSIP2Q5CZC0 6907 aa3.6□□□□□ -1.83
SMG6-204ENST00000570606 LGALS3P17931 250 aaKnown RBP3.59□□□□□ -1.83
SMG6-204ENST00000570606 PLNP26678 52 aa3.59□□□□□ -1.83
SMG6-204ENST00000570606 Q6ZVQ6 151 aa3.59□□□□□ -1.83
SMG6-204ENST00000570606 LOC107984156A0A0G2JMH3 177 aa3.58□□□□□ -1.84
SMG6-204ENST00000570606 J3QQQ9 107 aa3.58□□□□□ -1.84
SMG6-204ENST00000570606 ZNF73O43830 326 aaPredicted RBP3.58□□□□□ -1.84
SMG6-204ENST00000570606 LEPROTL1O95214 131 aa3.58□□□□□ -1.84
SMG6-204ENST00000570606 IGLV6-57P01721 117 aa3.58□□□□□ -1.84
SMG6-204ENST00000570606 NMUP48645 174 aa3.58□□□□□ -1.84
SMG6-204ENST00000570606 NPC2P61916 151 aa3.58□□□□□ -1.84
SMG6-204ENST00000570606 ARL17AQ8IVW1 177 aa3.58□□□□□ -1.84
SMG6-204ENST00000570606 LIMD2Q9BT23 127 aa3.58□□□□□ -1.84
SMG6-204ENST00000570606 DPM2O94777 84 aa3.57□□□□□ -1.84
SMG6-204ENST00000570606 NDUFC2O95298 119 aa3.57□□□□□ -1.84
SMG6-204ENST00000570606 HINT1P49773 126 aaPredicted RBP3.57□□□□□ -1.84
SMG6-204ENST00000570606 HRCT1Q6UXD1 115 aa3.57□□□□□ -1.84
SMG6-204ENST00000570606 ST20-AS1Q8NBB2 130 aa3.57□□□□□ -1.84
SMG6-204ENST00000570606 CBY1Q9Y3M2 126 aa3.57□□□□□ -1.84
SMG6-204ENST00000570606 C9orf92A6NGG3 77 aa3.56□□□□□ -1.84
SMG6-204ENST00000570606 SERF1AO75920 110 aa3.56□□□□□ -1.84
SMG6-204ENST00000570606 IGKCP01834 107 aa3.56□□□□□ -1.84
SMG6-204ENST00000570606 SLC25A34Q6PIV7 304 aa3.56□□□□□ -1.84
SMG6-204ENST00000570606 PMCHL2Q9BQD1 86 aa3.56□□□□□ -1.84
SMG6-204ENST00000570606 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
SMG6-204ENST00000570606 HSPB8Q9UJY1 196 aa3.56□□□□□ -1.84
SMG6-204ENST00000570606 IGLV8-61A0A075B6I0 122 aa3.55□□□□□ -1.84
SMG6-204ENST00000570606 FABP4P15090 132 aa3.55□□□□□ -1.84
SMG6-204ENST00000570606 PCOTHQ58A44 107 aa3.55□□□□□ -1.84
SMG6-204ENST00000570606 SOSTDC1Q6X4U4 206 aa3.55□□□□□ -1.84
SMG6-204ENST00000570606 OR13C6PQ8NH95 151 aa3.55□□□□□ -1.84
SMG6-204ENST00000570606 YPEL4Q96NS1 127 aa3.55□□□□□ -1.84
SMG6-204ENST00000570606 A0A0J9YXY3 114 aa3.54□□□□□ -1.84
SMG6-204ENST00000570606 SPANXCQ9NY87 97 aa3.54□□□□□ -1.84
SMG6-204ENST00000570606 DHRS4-AS1Q9P1J3 65 aa3.54□□□□□ -1.84
SMG6-204ENST00000570606 LAMTOR3Q9UHA4 124 aa3.54□□□□□ -1.84
SMG6-204ENST00000570606 TRGC2P03986 189 aa3.53□□□□□ -1.84
SMG6-204ENST00000570606 FLGP20930 4061 aaPredicted RBP3.52□□□□□ -1.85
SMG6-204ENST00000570606 E9PLD3 99 aa3.52□□□□□ -1.85
SMG6-204ENST00000570606 SPRR1BP22528 89 aa3.52□□□□□ -1.85
SMG6-204ENST00000570606 COX7BP24311 80 aa3.52□□□□□ -1.85
SMG6-204ENST00000570606 MT1HP80294 61 aa3.52□□□□□ -1.85
SMG6-204ENST00000570606 Q1RN00 199 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms