RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 A0A1W2PNN7 141 aa4.16□□□□□ -1.74
CTDNEP1-204ENST00000570484 IGKV2D-28P01615 120 aa4.16□□□□□ -1.74
CTDNEP1-204ENST00000570484 HAMPP81172 84 aa4.16□□□□□ -1.74
CTDNEP1-204ENST00000570484 BVES-AS1Q5T3Y7 98 aa4.16□□□□□ -1.74
CTDNEP1-204ENST00000570484 CIRBP-AS1Q8TBR5 109 aa4.16□□□□□ -1.74
CTDNEP1-204ENST00000570484 TMEM126AQ9H061 195 aa4.16□□□□□ -1.74
CTDNEP1-204ENST00000570484 DNAH10Q8IVF4 4471 aa4.16□□□□□ -1.74
CTDNEP1-204ENST00000570484 DNAH17Q9UFH2 4485 aa4.15□□□□□ -1.74
CTDNEP1-204ENST00000570484 TRAV23DV6A0A075B6W5 121 aa4.15□□□□□ -1.75
CTDNEP1-204ENST00000570484 TRBV10-3A0A0K0K1G6 114 aa4.15□□□□□ -1.75
CTDNEP1-204ENST00000570484 H7C2G1 150 aa4.15□□□□□ -1.75
CTDNEP1-204ENST00000570484 PRR3P79522 188 aaKnown RBP4.15□□□□□ -1.75
CTDNEP1-204ENST00000570484 PHF5AQ7RTV0 110 aaKnown RBP4.15□□□□□ -1.75
CTDNEP1-204ENST00000570484 Q8NDZ9 215 aa4.15□□□□□ -1.75
CTDNEP1-204ENST00000570484 RPL37AP8A6NKH3 93 aa4.14□□□□□ -1.75
CTDNEP1-204ENST00000570484 K7ERJ3 54 aa4.14□□□□□ -1.75
CTDNEP1-204ENST00000570484 PRYO14603 147 aa4.14□□□□□ -1.75
CTDNEP1-204ENST00000570484 LINC00337Q8N6G1 96 aa4.14□□□□□ -1.75
CTDNEP1-204ENST00000570484 DIRC1Q969H9 104 aa4.14□□□□□ -1.75
CTDNEP1-204ENST00000570484 LINC00167Q96N53 147 aa4.14□□□□□ -1.75
CTDNEP1-204ENST00000570484 PRO1854Q9UHT4 67 aa4.14□□□□□ -1.75
CTDNEP1-204ENST00000570484 FAT2Q9NYQ8 4349 aa4.13□□□□□ -1.75
CTDNEP1-204ENST00000570484 ETDCA0A1B0GVM5 59 aa4.13□□□□□ -1.75
CTDNEP1-204ENST00000570484 CDK2AP2O75956 126 aa4.13□□□□□ -1.75
CTDNEP1-204ENST00000570484 IGLV6-57P01721 117 aa4.13□□□□□ -1.75
CTDNEP1-204ENST00000570484 CFC1BP0CG36 223 aa4.13□□□□□ -1.75
CTDNEP1-204ENST00000570484 CFC1P0CG37 223 aa4.13□□□□□ -1.75
CTDNEP1-204ENST00000570484 PSMB2P49721 201 aa4.13□□□□□ -1.75
CTDNEP1-204ENST00000570484 REG3GQ6UW15 175 aa4.13□□□□□ -1.75
CTDNEP1-204ENST00000570484 KRTAP7-1Q8IUC3 87 aa4.13□□□□□ -1.75
CTDNEP1-204ENST00000570484 RYR3Q15413 4870 aa4.13□□□□□ -1.75
CTDNEP1-204ENST00000570484 IGLV1-50A0A075B6I6 118 aa4.12□□□□□ -1.75
CTDNEP1-204ENST00000570484 A0A1B0GWB2 263 aa4.12□□□□□ -1.75
CTDNEP1-204ENST00000570484 ZNF73O43830 326 aaPredicted RBP4.12□□□□□ -1.75
CTDNEP1-204ENST00000570484 UBE2AP49459 152 aa4.12□□□□□ -1.75
CTDNEP1-204ENST00000570484 VAMP3Q15836 100 aa4.12□□□□□ -1.75
CTDNEP1-204ENST00000570484 LYRM7Q5U5X0 104 aa4.12□□□□□ -1.75
CTDNEP1-204ENST00000570484 FRAS1Q86XX4 4008 aa4.11□□□□□ -1.75
CTDNEP1-204ENST00000570484 EPM2AB3EWF7 344 aa4.11□□□□□ -1.75
CTDNEP1-204ENST00000570484 TRIAP1O43715 76 aa4.11□□□□□ -1.75
CTDNEP1-204ENST00000570484 SNCGO76070 127 aa4.11□□□□□ -1.75
CTDNEP1-204ENST00000570484 COX6CP09669 75 aa4.11□□□□□ -1.75
CTDNEP1-204ENST00000570484 RPL37AP61513 92 aaKnown RBP4.11□□□□□ -1.75
CTDNEP1-204ENST00000570484 C6orf99Q4VX62 202 aa4.11□□□□□ -1.75
CTDNEP1-204ENST00000570484 C1orf137Q5JT78 98 aa4.11□□□□□ -1.75
CTDNEP1-204ENST00000570484 COL5A1-AS1Q5SY13 56 aa4.11□□□□□ -1.75
CTDNEP1-204ENST00000570484 FAM19A1Q7Z5A9 133 aa4.11□□□□□ -1.75
CTDNEP1-204ENST00000570484 SNHG12Q9BXW3 62 aa4.11□□□□□ -1.75
CTDNEP1-204ENST00000570484 KCNQ1DNQ9H478 68 aa4.11□□□□□ -1.75
CTDNEP1-204ENST00000570484 HECTD4Q9Y4D8 3996 aa4.1□□□□□ -1.75
CTDNEP1-204ENST00000570484 BCE1O60756 84 aa4.1□□□□□ -1.75
CTDNEP1-204ENST00000570484 TSPAN13O95857 204 aa4.1□□□□□ -1.75
CTDNEP1-204ENST00000570484 COX7BP24311 80 aa4.1□□□□□ -1.75
CTDNEP1-204ENST00000570484 SMIM11BQ8TCY0 68 aa4.1□□□□□ -1.75
CTDNEP1-204ENST00000570484 SLC25A20O43772 301 aa4.09□□□□□ -1.75
CTDNEP1-204ENST00000570484 SMR3BP02814 79 aaPredicted RBP4.09□□□□□ -1.75
CTDNEP1-204ENST00000570484 RPL28P46779 137 aaKnown RBP4.09□□□□□ -1.75
CTDNEP1-204ENST00000570484 XGP55808 180 aa4.09□□□□□ -1.75
CTDNEP1-204ENST00000570484 PSORS1C2Q9UIG4 136 aa4.09□□□□□ -1.75
CTDNEP1-204ENST00000570484 TRBV7-6A0A0J9YX20 115 aa4.08□□□□□ -1.76
CTDNEP1-204ENST00000570484 SCGB1C2P0DMR2 95 aa4.08□□□□□ -1.76
CTDNEP1-204ENST00000570484 ELOF1P60002 83 aaKnown RBP4.08□□□□□ -1.76
CTDNEP1-204ENST00000570484 PRLHP81277 87 aa4.08□□□□□ -1.76
CTDNEP1-204ENST00000570484 Q6ZRX8 168 aa4.08□□□□□ -1.76
CTDNEP1-204ENST00000570484 HIGD2AQ9BW72 106 aa4.08□□□□□ -1.76
CTDNEP1-204ENST00000570484 PKD1P98161 4303 aa4.07□□□□□ -1.76
CTDNEP1-204ENST00000570484 H0YGX0 51 aa4.07□□□□□ -1.76
CTDNEP1-204ENST00000570484 H3BUT2 72 aa4.07□□□□□ -1.76
CTDNEP1-204ENST00000570484 DNAL4O96015 105 aa4.07□□□□□ -1.76
CTDNEP1-204ENST00000570484 SPRR1AP35321 89 aa4.07□□□□□ -1.76
CTDNEP1-204ENST00000570484 NAA38Q9BRA0 125 aaKnown RBP4.07□□□□□ -1.76
CTDNEP1-204ENST00000570484 DHRS4-AS1Q9P1J3 65 aa4.07□□□□□ -1.76
CTDNEP1-204ENST00000570484 DNAH11Q96DT5 4516 aa4.06□□□□□ -1.76
CTDNEP1-204ENST00000570484 IGLV7-43P04211 117 aa4.06□□□□□ -1.76
CTDNEP1-204ENST00000570484 FABP2P12104 132 aa4.06□□□□□ -1.76
CTDNEP1-204ENST00000570484 Q5VSD8 79 aa4.06□□□□□ -1.76
CTDNEP1-204ENST00000570484 KRTAP11-1Q8IUC1 163 aa4.06□□□□□ -1.76
CTDNEP1-204ENST00000570484 ZNF706Q9Y5V0 76 aaPredicted RBP4.06□□□□□ -1.76
CTDNEP1-204ENST00000570484 A0A1W2PPM0 123 aa4.05□□□□□ -1.76
CTDNEP1-204ENST00000570484 H0Y9J4 135 aa4.05□□□□□ -1.76
CTDNEP1-204ENST00000570484 TAX1BP3O14907 124 aa4.05□□□□□ -1.76
CTDNEP1-204ENST00000570484 ZNF861PO60384 105 aa4.05□□□□□ -1.76
CTDNEP1-204ENST00000570484 ATXN8Q156A1 80 aa4.05□□□□□ -1.76
CTDNEP1-204ENST00000570484 hADV29S1A0JD25 119 aa4.04□□□□□ -1.76
CTDNEP1-204ENST00000570484 KRTAP4-16G5E9R7 235 aaPredicted RBP4.04□□□□□ -1.76
CTDNEP1-204ENST00000570484 INAFM2P0DMQ5 153 aa4.04□□□□□ -1.76
CTDNEP1-204ENST00000570484 LINC00575Q6W349 94 aa4.04□□□□□ -1.76
CTDNEP1-204ENST00000570484 CLEC2BQ92478 149 aa4.04□□□□□ -1.76
CTDNEP1-204ENST00000570484 PKHD1P08F94 4074 aa4.04□□□□□ -1.76
CTDNEP1-204ENST00000570484 DNAH5Q8TE73 4624 aa4.03□□□□□ -1.76
CTDNEP1-204ENST00000570484 TRBV20-1A0A075B6N2 111 aa4.03□□□□□ -1.76
CTDNEP1-204ENST00000570484 A0A1B0GX51 115 aa4.03□□□□□ -1.76
CTDNEP1-204ENST00000570484 SMCR5Q8TEV8 140 aa4.03□□□□□ -1.76
CTDNEP1-204ENST00000570484 SPCS1Q9Y6A9 102 aa4.03□□□□□ -1.76
CTDNEP1-204ENST00000570484 LST1O00453 97 aa4.02□□□□□ -1.77
CTDNEP1-204ENST00000570484 TRACP01848 142 aa4.02□□□□□ -1.77
CTDNEP1-204ENST00000570484 SPINK6Q6UWN8 80 aa4.02□□□□□ -1.77
CTDNEP1-204ENST00000570484 Q6ZQY7 126 aa4.02□□□□□ -1.77
CTDNEP1-204ENST00000570484 KRTAP13-1Q8IUC0 172 aa4.02□□□□□ -1.77
CTDNEP1-204ENST00000570484 Q9BRP9 147 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 310.7 ms