RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 EGFEM1PQ0D2K5 195 aa10.19□□□□□ -0.78
USP43-202ENST00000570475 Q6ZRP5 223 aa10.19□□□□□ -0.78
USP43-202ENST00000570475 PRR34Q9NV39 138 aa10.19□□□□□ -0.78
USP43-202ENST00000570475 TRAV7A0A075B6U4 112 aa10.19□□□□□ -0.78
USP43-202ENST00000570475 C5orf47Q569G3 176 aa10.19□□□□□ -0.78
USP43-202ENST00000570475 IGKV2-24A0A0C4DH68 120 aa10.18□□□□□ -0.78
USP43-202ENST00000570475 VPREB1P12018 145 aa10.18□□□□□ -0.78
USP43-202ENST00000570475 ELOF1P60002 83 aaKnown RBP10.16□□□□□ -0.78
USP43-202ENST00000570475 LOC110117498A0A087WWA1 95 aa10.15□□□□□ -0.78
USP43-202ENST00000570475 FUSP35637 526 aaKnown RBP eCLIP10.15□□□□□ -0.78
USP43-202ENST00000570475 FAM168BA1KXE4 195 aa10.15□□□□□ -0.79
USP43-202ENST00000570475 PKIGQ9Y2B9 76 aa10.15□□□□□ -0.79
USP43-202ENST00000570475 MPLKIPQ8TAP9 179 aa10.13□□□□□ -0.79
USP43-202ENST00000570475 DEFB116Q30KQ4 102 aa10.13□□□□□ -0.79
USP43-202ENST00000570475 SERTAD4-AS1Q5TG53 156 aa10.13□□□□□ -0.79
USP43-202ENST00000570475 C15orf56Q8N910 161 aa10.13□□□□□ -0.79
USP43-202ENST00000570475 FAM30AQ9NZY2 134 aa10.13□□□□□ -0.79
USP43-202ENST00000570475 OXTP01178 125 aa10.13□□□□□ -0.79
USP43-202ENST00000570475 C7orf33Q8WU49 177 aa10.13□□□□□ -0.79
USP43-202ENST00000570475 A0A0G2JQZ4 141 aa10.12□□□□□ -0.79
USP43-202ENST00000570475 A0A1W2PNN7 141 aa10.12□□□□□ -0.79
USP43-202ENST00000570475 ST20-AS1Q8NBB2 130 aa10.12□□□□□ -0.79
USP43-202ENST00000570475 A0A096LNI7 61 aa10.11□□□□□ -0.79
USP43-202ENST00000570475 PRR4Q16378 134 aa10.11□□□□□ -0.79
USP43-202ENST00000570475 LRCOL1A6NCL2 159 aa10.11□□□□□ -0.79
USP43-202ENST00000570475 PSCAO43653 123 aa10.1□□□□□ -0.79
USP43-202ENST00000570475 HIGD2AQ9BW72 106 aa10.1□□□□□ -0.79
USP43-202ENST00000570475 KRTAP10-11P60412 298 aa10.09□□□□□ -0.79
USP43-202ENST00000570475 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.08□□□□□ -0.8
USP43-202ENST00000570475 GVQW2A0A096LPI5 108 aaPredicted RBP10.08□□□□□ -0.8
USP43-202ENST00000570475 H3BQ85 93 aa10.08□□□□□ -0.8
USP43-202ENST00000570475 CASC10Q5T4H9 136 aa10.08□□□□□ -0.8
USP43-202ENST00000570475 LINC00528Q8N1L1 170 aa10.08□□□□□ -0.8
USP43-202ENST00000570475 RPS28P62857 69 aaKnown RBP10.08□□□□□ -0.8
USP43-202ENST00000570475 CXCL6P80162 114 aa10.08□□□□□ -0.8
USP43-202ENST00000570475 TRBV7-4A0A0J9YYF1 115 aa10.07□□□□□ -0.8
USP43-202ENST00000570475 TMEM254Q8TBM7 123 aa10.07□□□□□ -0.8
USP43-202ENST00000570475 H7BZZ5 65 aa10.07□□□□□ -0.8
USP43-202ENST00000570475 C1orf137Q5JT78 98 aa10.06□□□□□ -0.8
USP43-202ENST00000570475 ANK3Q12955 4377 aaKnown RBP10.04□□□□□ -0.8
USP43-202ENST00000570475 A0A0U1RQV1 116 aa10.04□□□□□ -0.8
USP43-202ENST00000570475 Q8N377 158 aa10.02□□□□□ -0.8
USP43-202ENST00000570475 LINC00474Q9P2X8 69 aa10.02□□□□□ -0.8
USP43-202ENST00000570475 UBE2DNLQ8IWF7 75 aa10.02□□□□□ -0.81
USP43-202ENST00000570475 SMIM29Q86T20 159 aa10.02□□□□□ -0.81
USP43-202ENST00000570475 WFDC13Q8IUB5 93 aa10.02□□□□□ -0.81
USP43-202ENST00000570475 PRLHP81277 87 aa10.01□□□□□ -0.81
USP43-202ENST00000570475 SERP1Q9Y6X1 66 aa10.01□□□□□ -0.81
USP43-202ENST00000570475 LINC01556Q5JQF7 62 aa10□□□□□ -0.81
USP43-202ENST00000570475 STAB2Q8WWQ8 2551 aa10□□□□□ -0.81
USP43-202ENST00000570475 BRK1Q8WUW1 75 aa9.99□□□□□ -0.81
USP43-202ENST00000570475 TRBV7-6A0A0J9YX20 115 aa9.98□□□□□ -0.81
USP43-202ENST00000570475 ERC2-IT1O76042 136 aa9.98□□□□□ -0.81
USP43-202ENST00000570475 KMT2BQ9UMN6 2715 aaPredicted RBP9.98□□□□□ -0.81
USP43-202ENST00000570475 DHRS4-AS1Q9P1J3 65 aa9.98□□□□□ -0.81
USP43-202ENST00000570475 LINC00588Q9Y4M8 146 aa9.96□□□□□ -0.81
USP43-202ENST00000570475 IGKV4-1P06312 121 aa9.96□□□□□ -0.81
USP43-202ENST00000570475 MRPL55Q7Z7F7 128 aaKnown RBP9.96□□□□□ -0.82
USP43-202ENST00000570475 PRYO14603 147 aa9.95□□□□□ -0.82
USP43-202ENST00000570475 Q6ZRX8 168 aa9.95□□□□□ -0.82
USP43-202ENST00000570475 KLKP1Q107X0 134 aa9.95□□□□□ -0.82
USP43-202ENST00000570475 KRTAP26-1Q6PEX3 210 aa9.95□□□□□ -0.82
USP43-202ENST00000570475 KRTAP24-1Q3LI83 254 aa9.94□□□□□ -0.82
USP43-202ENST00000570475 KCNQ1DNQ9H478 68 aa9.94□□□□□ -0.82
USP43-202ENST00000570475 Q9BRP9 147 aa9.93□□□□□ -0.82
USP43-202ENST00000570475 A0A1W2PNM2 257 aa9.93□□□□□ -0.82
USP43-202ENST00000570475 Q5XG85 94 aa9.93□□□□□ -0.82
USP43-202ENST00000570475 A0A087WSZ3 146 aa9.92□□□□□ -0.82
USP43-202ENST00000570475 SMIM26A0A096LP01 95 aa9.92□□□□□ -0.82
USP43-202ENST00000570475 NDUFC1O43677 76 aa9.91□□□□□ -0.82
USP43-202ENST00000570475 REG3GQ6UW15 175 aa9.9□□□□□ -0.82
USP43-202ENST00000570475 H3BNG1 76 aa9.9□□□□□ -0.82
USP43-202ENST00000570475 K7EQZ3 153 aa9.9□□□□□ -0.82
USP43-202ENST00000570475 UBE2AP49459 152 aa9.89□□□□□ -0.83
USP43-202ENST00000570475 RPL37AP61513 92 aaKnown RBP9.89□□□□□ -0.83
USP43-202ENST00000570475 IGLV1-50A0A075B6I6 118 aa9.89□□□□□ -0.83
USP43-202ENST00000570475 LINC00336Q6ZUF6 198 aa9.89□□□□□ -0.83
USP43-202ENST00000570475 TENM2Q9NT68 2774 aa9.88□□□□□ -0.83
USP43-202ENST00000570475 CHTF8P0CG12 524 aa9.88□□□□□ -0.83
USP43-202ENST00000570475 Q8NBF4 154 aa9.87□□□□□ -0.83
USP43-202ENST00000570475 LINC00476Q8WZB0 136 aa9.87□□□□□ -0.83
USP43-202ENST00000570475 BCE1O60756 84 aa9.86□□□□□ -0.83
USP43-202ENST00000570475 DNAH10OSP0CZ25 163 aa9.86□□□□□ -0.83
USP43-202ENST00000570475 H0Y9J4 135 aa9.84□□□□□ -0.83
USP43-202ENST00000570475 SRRM2Q9UQ35 2752 aaKnown RBP9.83□□□□□ -0.84
USP43-202ENST00000570475 FAM229BQ4G0N7 80 aa9.82□□□□□ -0.84
USP43-202ENST00000570475 OCR1Q9BZK8 76 aa9.82□□□□□ -0.84
USP43-202ENST00000570475 LINC00208Q96KT6 92 aa9.82□□□□□ -0.84
USP43-202ENST00000570475 FP248Q71RG6 208 aaPredicted RBP9.81□□□□□ -0.84
USP43-202ENST00000570475 PHF5AQ7RTV0 110 aaKnown RBP9.81□□□□□ -0.84
USP43-202ENST00000570475 IGLV5-48A0A075B6I7 105 aa9.8□□□□□ -0.84
USP43-202ENST00000570475 PSPHP1O15172 72 aa9.8□□□□□ -0.84
USP43-202ENST00000570475 MP68P56378 58 aa9.79□□□□□ -0.84
USP43-202ENST00000570475 EPM2AB3EWF7 344 aa9.78□□□□□ -0.84
USP43-202ENST00000570475 HCG22E2RYF7 251 aa9.78□□□□□ -0.84
USP43-202ENST00000570475 CSMD3Q7Z407 3707 aa9.77□□□□□ -0.85
USP43-202ENST00000570475 IGLV9-49A0A0B4J1Y8 123 aa9.77□□□□□ -0.85
USP43-202ENST00000570475 IGFL1Q6UW32 110 aa9.77□□□□□ -0.85
USP43-202ENST00000570475 ATP5EP56381 51 aaPredicted RBP9.76□□□□□ -0.85
USP43-202ENST00000570475 DSCR10P59022 87 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms