RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	HIGD2A	Q9BW72	106 aa		10.76	□□□□□ -0.69
PKD1-238	ENST00000570150	TRAV23DV6	A0A075B6W5	121 aa		10.75	□□□□□ -0.69
PKD1-238	ENST00000570150	TNXB	P22105	4242 aa		10.74	□□□□□ -0.69
PKD1-238	ENST00000570150	NPC2	P61916	151 aa		10.74	□□□□□ -0.69
PKD1-238	ENST00000570150	CTAG1A	P78358	180 aa		10.74	□□□□□ -0.69
PKD1-238	ENST00000570150	SOSTDC1	Q6X4U4	206 aa		10.73	□□□□□ -0.69
PKD1-238	ENST00000570150	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	10.72	□□□□□ -0.69
PKD1-238	ENST00000570150	ZNF73	O43830	326 aa	Predicted RBP	10.72	□□□□□ -0.69
PKD1-238	ENST00000570150	OR13C6P	Q8NH95	151 aa		10.72	□□□□□ -0.69
PKD1-238	ENST00000570150	TYMSOS	Q8TAI1	123 aa		10.72	□□□□□ -0.69
PKD1-238	ENST00000570150		Q6ZRX8	168 aa		10.71	□□□□□ -0.69
PKD1-238	ENST00000570150	TTTY13	Q9BZ97	58 aa		10.71	□□□□□ -0.69
PKD1-238	ENST00000570150		B5MCH6	92 aa		10.7	□□□□□ -0.7
PKD1-238	ENST00000570150	PCP2	Q8IVA1	136 aa		10.7	□□□□□ -0.7
PKD1-238	ENST00000570150	TRAV13-2	A0A0B4J235	113 aa		10.67	□□□□□ -0.7
PKD1-238	ENST00000570150	SPRR4	Q96PI1	79 aa		10.67	□□□□□ -0.7
PKD1-238	ENST00000570150	UBR4	Q5T4S7	5183 aa		10.66	□□□□□ -0.7
PKD1-238	ENST00000570150	SMCR5	Q8TEV8	140 aa		10.66	□□□□□ -0.7
PKD1-238	ENST00000570150	DHRS4-AS1	Q9P1J3	65 aa		10.66	□□□□□ -0.7
PKD1-238	ENST00000570150	TRBV7-6	A0A0J9YX20	115 aa		10.65	□□□□□ -0.7
PKD1-238	ENST00000570150	EIF4EBP3	O60516	100 aa	Predicted RBP	10.65	□□□□□ -0.7
PKD1-238	ENST00000570150		A0A087X002	238 aa		10.64	□□□□□ -0.71
PKD1-238	ENST00000570150	DLEU1	O43261	78 aa		10.64	□□□□□ -0.71
PKD1-238	ENST00000570150		A4D1N5	150 aa		10.63	□□□□□ -0.71
PKD1-238	ENST00000570150	SPAG11A	Q6PDA7	123 aa		10.63	□□□□□ -0.71
PKD1-238	ENST00000570150	MUSTN1	Q8IVN3	82 aa		10.63	□□□□□ -0.71
PKD1-238	ENST00000570150		A6NDN8	102 aa		10.62	□□□□□ -0.71
PKD1-238	ENST00000570150	COX8A	P10176	69 aa		10.62	□□□□□ -0.71
PKD1-238	ENST00000570150	SLC25A34	Q6PIV7	304 aa		10.62	□□□□□ -0.71
PKD1-238	ENST00000570150	LINC00483	Q53H64	154 aa		10.61	□□□□□ -0.71
PKD1-238	ENST00000570150	VAMP8	Q9BV40	100 aa		10.61	□□□□□ -0.71
PKD1-238	ENST00000570150		A0A1B0GWB2	263 aa		10.59	□□□□□ -0.71
PKD1-238	ENST00000570150	COX7B	P24311	80 aa		10.59	□□□□□ -0.71
PKD1-238	ENST00000570150	C4orf48	Q5BLP8	95 aa		10.59	□□□□□ -0.71
PKD1-238	ENST00000570150	LINC00304	Q8N9R0	145 aa		10.59	□□□□□ -0.71
PKD1-238	ENST00000570150	NHP2	Q9NX24	153 aa	Known RBP	10.59	□□□□□ -0.71
PKD1-238	ENST00000570150	ELOF1	P60002	83 aa	Known RBP	10.58	□□□□□ -0.72
PKD1-238	ENST00000570150	VAMP3	Q15836	100 aa		10.58	□□□□□ -0.72
PKD1-238	ENST00000570150	HIST1H4G	Q99525	98 aa		10.58	□□□□□ -0.72
PKD1-238	ENST00000570150		Q9BRP9	147 aa		10.58	□□□□□ -0.72
PKD1-238	ENST00000570150	ANAPC11	Q9NYG5	84 aa		10.58	□□□□□ -0.72
PKD1-238	ENST00000570150	C6orf99	Q4VX62	202 aa		10.57	□□□□□ -0.72
PKD1-238	ENST00000570150	KRTAP13-2	Q52LG2	175 aa		10.56	□□□□□ -0.72
PKD1-238	ENST00000570150	GAGE2A	Q6NT46	116 aa		10.56	□□□□□ -0.72
PKD1-238	ENST00000570150	SPATA45	Q537H7	98 aa		10.55	□□□□□ -0.72
PKD1-238	ENST00000570150	HIGD1B	Q9P298	99 aa		10.55	□□□□□ -0.72
PKD1-238	ENST00000570150	SSBP3-AS1	Q7Z2R9	100 aa		10.54	□□□□□ -0.72
PKD1-238	ENST00000570150	PAM16	Q9Y3D7	125 aa		10.54	□□□□□ -0.72
PKD1-238	ENST00000570150	SLC25A20	O43772	301 aa		10.52	□□□□□ -0.73
PKD1-238	ENST00000570150	ERC2-IT1	O76042	136 aa		10.51	□□□□□ -0.73
PKD1-238	ENST00000570150	SPINK1	P00995	79 aa		10.5	□□□□□ -0.73
PKD1-238	ENST00000570150	LRP2	P98164	4655 aa		10.5	□□□□□ -0.73
PKD1-238	ENST00000570150	TAL2	Q16559	108 aa		10.5	□□□□□ -0.73
PKD1-238	ENST00000570150	TMEM238L	A0A1B0GVL6	79 aa		10.49	□□□□□ -0.73
PKD1-238	ENST00000570150		A6NJY4	79 aa		10.49	□□□□□ -0.73
PKD1-238	ENST00000570150	SNCG	O76070	127 aa		10.49	□□□□□ -0.73
PKD1-238	ENST00000570150	LAMTOR3	Q9UHA4	124 aa		10.49	□□□□□ -0.73
PKD1-238	ENST00000570150	TSPAN13	O95857	204 aa		10.48	□□□□□ -0.73
PKD1-238	ENST00000570150	SPRR1B	P22528	89 aa		10.48	□□□□□ -0.73
PKD1-238	ENST00000570150	C3orf22	Q8N5N4	141 aa		10.48	□□□□□ -0.73
PKD1-238	ENST00000570150	C14orf144	Q96I85	54 aa		10.48	□□□□□ -0.73
PKD1-238	ENST00000570150	RPS29	P62273	56 aa	Known RBP	10.47	□□□□□ -0.73
PKD1-238	ENST00000570150	BVES-AS1	Q5T3Y7	98 aa		10.47	□□□□□ -0.73
PKD1-238	ENST00000570150	SMIM11B	Q8TCY0	68 aa		10.47	□□□□□ -0.73
PKD1-238	ENST00000570150	TEX49	A0A1B0GTD5	131 aa		10.46	□□□□□ -0.73
PKD1-238	ENST00000570150	PRR4	Q16378	134 aa		10.46	□□□□□ -0.73
PKD1-238	ENST00000570150	TMA7	Q9Y2S6	64 aa	Known RBP	10.46	□□□□□ -0.73
PKD1-238	ENST00000570150	IGLV9-49	A0A0B4J1Y8	123 aa		10.45	□□□□□ -0.74
PKD1-238	ENST00000570150		Q8NBF4	154 aa		10.45	□□□□□ -0.74
PKD1-238	ENST00000570150	MOBP	Q13875	183 aa		10.44	□□□□□ -0.74
PKD1-238	ENST00000570150	C9orf153	Q5TBE3	101 aa		10.44	□□□□□ -0.74
PKD1-238	ENST00000570150	RAB37	Q96AX2	223 aa		10.44	□□□□□ -0.74
PKD1-238	ENST00000570150	PYY3	Q5JQD4	70 aa		10.42	□□□□□ -0.74
PKD1-238	ENST00000570150		A0A0B4J2C4	111 aa		10.41	□□□□□ -0.74
PKD1-238	ENST00000570150	ST20-AS1	Q8NBB2	130 aa		10.41	□□□□□ -0.74
PKD1-238	ENST00000570150	IGLV5-48	A0A075B6I7	105 aa		10.39	□□□□□ -0.75
PKD1-238	ENST00000570150	GHRH	P01286	108 aa		10.39	□□□□□ -0.75
PKD1-238	ENST00000570150	FP248	Q71RG6	208 aa	Predicted RBP	10.39	□□□□□ -0.75
PKD1-238	ENST00000570150	CEND1	Q8N111	149 aa		10.39	□□□□□ -0.75
PKD1-238	ENST00000570150	hADV29S1	A0JD25	119 aa		10.37	□□□□□ -0.75
PKD1-238	ENST00000570150		H0YGX0	51 aa		10.37	□□□□□ -0.75
PKD1-238	ENST00000570150	LINC00575	Q6W349	94 aa		10.37	□□□□□ -0.75
PKD1-238	ENST00000570150	PPDPFL	Q8WWR9	84 aa		10.37	□□□□□ -0.75
PKD1-238	ENST00000570150	C2orf91	Q6ZV80	131 aa		10.36	□□□□□ -0.75
PKD1-238	ENST00000570150	DEFB105A	Q8NG35	78 aa		10.36	□□□□□ -0.75
PKD1-238	ENST00000570150	PRO1933	Q9H354	126 aa		10.36	□□□□□ -0.75
PKD1-238	ENST00000570150	UQCR10	Q9UDW1	63 aa		10.36	□□□□□ -0.75
PKD1-238	ENST00000570150		F8WEM9	126 aa		10.35	□□□□□ -0.75
PKD1-238	ENST00000570150	CFC1B	P0CG36	223 aa		10.35	□□□□□ -0.75
PKD1-238	ENST00000570150	CFC1	P0CG37	223 aa		10.35	□□□□□ -0.75
PKD1-238	ENST00000570150	HSD52	Q0P140	79 aa		10.35	□□□□□ -0.75
PKD1-238	ENST00000570150	C12orf57	Q99622	126 aa		10.35	□□□□□ -0.75
PKD1-238	ENST00000570150	LIMD2	Q9BT23	127 aa		10.35	□□□□□ -0.75
PKD1-238	ENST00000570150	CD164	Q04900	197 aa		10.34	□□□□□ -0.75
PKD1-238	ENST00000570150	OCIAD2	Q56VL3	154 aa		10.34	□□□□□ -0.75
PKD1-238	ENST00000570150	PRO1854	Q9UHT4	67 aa		10.34	□□□□□ -0.75
PKD1-238	ENST00000570150		Q1RN00	199 aa		10.33	□□□□□ -0.76
PKD1-238	ENST00000570150	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	10.33	□□□□□ -0.76
PKD1-238	ENST00000570150	RNF213	Q63HN8	5207 aa		10.33	□□□□□ -0.76
PKD1-238	ENST00000570150	IGLV7-46	A0A075B6I9	117 aa		10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms