RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 A0A087X002 238 aa5.83□□□□□ -1.48
CLN6-209ENST00000569336 IGLV6-57P01721 117 aa5.83□□□□□ -1.48
CLN6-209ENST00000569336 SOSTDC1Q6X4U4 206 aa5.83□□□□□ -1.48
CLN6-209ENST00000569336 Q6ZVH6 145 aa5.83□□□□□ -1.48
CLN6-209ENST00000569336 TYMSOSQ8TAI1 123 aa5.83□□□□□ -1.48
CLN6-209ENST00000569336 SPANXDQ9BXN6 97 aa5.83□□□□□ -1.48
CLN6-209ENST00000569336 TTTY13Q9BZ97 58 aa5.83□□□□□ -1.48
CLN6-209ENST00000569336 KRTAP4-16G5E9R7 235 aaPredicted RBP5.82□□□□□ -1.48
CLN6-209ENST00000569336 JOSD1Q15040 202 aaPredicted RBP5.82□□□□□ -1.48
CLN6-209ENST00000569336 Q6ZRX8 168 aa5.82□□□□□ -1.48
CLN6-209ENST00000569336 LINC00518Q8N0U6 118 aa5.82□□□□□ -1.48
CLN6-209ENST00000569336 PPDPFQ9H3Y8 114 aa5.82□□□□□ -1.48
CLN6-209ENST00000569336 B5MCH6 92 aa5.81□□□□□ -1.48
CLN6-209ENST00000569336 IFITM1P13164 125 aa5.81□□□□□ -1.48
CLN6-209ENST00000569336 HINT1P49773 126 aaPredicted RBP5.81□□□□□ -1.48
CLN6-209ENST00000569336 ZNF73O43830 326 aaPredicted RBP5.8□□□□□ -1.48
CLN6-209ENST00000569336 EIF4EBP3O60516 100 aaPredicted RBP5.8□□□□□ -1.48
CLN6-209ENST00000569336 PCP2Q8IVA1 136 aa5.8□□□□□ -1.48
CLN6-209ENST00000569336 OR13C6PQ8NH95 151 aa5.8□□□□□ -1.48
CLN6-209ENST00000569336 SPRR4Q96PI1 79 aa5.8□□□□□ -1.48
CLN6-209ENST00000569336 LRP2P98164 4655 aa5.8□□□□□ -1.48
CLN6-209ENST00000569336 C5orf52A6NGY3 159 aa5.79□□□□□ -1.48
CLN6-209ENST00000569336 SCGB1D1O95968 90 aa5.79□□□□□ -1.48
CLN6-209ENST00000569336 KRTAP13-2Q52LG2 175 aa5.78□□□□□ -1.48
CLN6-209ENST00000569336 SMCR5Q8TEV8 140 aa5.78□□□□□ -1.48
CLN6-209ENST00000569336 ANAPC11Q9NYG5 84 aa5.78□□□□□ -1.48
CLN6-209ENST00000569336 LINC00304Q8N9R0 145 aa5.77□□□□□ -1.49
CLN6-209ENST00000569336 KRTAP3-3Q9BYR6 98 aa5.77□□□□□ -1.49
CLN6-209ENST00000569336 KRTAP3-2Q9BYR7 98 aa5.77□□□□□ -1.49
CLN6-209ENST00000569336 CTAG1AP78358 180 aa5.76□□□□□ -1.49
CLN6-209ENST00000569336 SVIPQ8NHG7 77 aa5.76□□□□□ -1.49
CLN6-209ENST00000569336 Q9BRP9 147 aa5.76□□□□□ -1.49
CLN6-209ENST00000569336 LINC00483Q53H64 154 aa5.75□□□□□ -1.49
CLN6-209ENST00000569336 DHRS4-AS1Q9P1J3 65 aa5.75□□□□□ -1.49
CLN6-209ENST00000569336 TRAV13-2A0A0B4J235 113 aa5.74□□□□□ -1.49
CLN6-209ENST00000569336 A6NDN8 102 aa5.74□□□□□ -1.49
CLN6-209ENST00000569336 TSPAN13O95857 204 aa5.74□□□□□ -1.49
CLN6-209ENST00000569336 GAGE2AQ6NT46 116 aa5.74□□□□□ -1.49
CLN6-209ENST00000569336 MUSTN1Q8IVN3 82 aa5.74□□□□□ -1.49
CLN6-209ENST00000569336 TRBV7-6A0A0J9YX20 115 aa5.73□□□□□ -1.49
CLN6-209ENST00000569336 ELOF1P60002 83 aaKnown RBP5.73□□□□□ -1.49
CLN6-209ENST00000569336 C6orf99Q4VX62 202 aa5.73□□□□□ -1.49
CLN6-209ENST00000569336 SPAG11AQ6PDA7 123 aa5.73□□□□□ -1.49
CLN6-209ENST00000569336 C3orf22Q8N5N4 141 aa5.73□□□□□ -1.49
CLN6-209ENST00000569336 ERC2-IT1O76042 136 aa5.72□□□□□ -1.49
CLN6-209ENST00000569336 COX8AP10176 69 aa5.72□□□□□ -1.49
CLN6-209ENST00000569336 COX7BP24311 80 aa5.72□□□□□ -1.49
CLN6-209ENST00000569336 PRR4Q16378 134 aa5.72□□□□□ -1.49
CLN6-209ENST00000569336 C4orf48Q5BLP8 95 aa5.72□□□□□ -1.49
CLN6-209ENST00000569336 SLC25A34Q6PIV7 304 aa5.72□□□□□ -1.49
CLN6-209ENST00000569336 VAMP8Q9BV40 100 aa5.72□□□□□ -1.49
CLN6-209ENST00000569336 A0A1B0GWB2 263 aa5.71□□□□□ -1.5
CLN6-209ENST00000569336 A4D1N5 150 aa5.71□□□□□ -1.5
CLN6-209ENST00000569336 DLEU1O43261 78 aa5.71□□□□□ -1.5
CLN6-209ENST00000569336 IGLV9-49A0A0B4J1Y8 123 aa5.7□□□□□ -1.5
CLN6-209ENST00000569336 A6NJY4 79 aa5.7□□□□□ -1.5
CLN6-209ENST00000569336 MOBPQ13875 183 aa5.7□□□□□ -1.5
CLN6-209ENST00000569336 Q8NBF4 154 aa5.7□□□□□ -1.5
CLN6-209ENST00000569336 HIST1H4GQ99525 98 aa5.7□□□□□ -1.5
CLN6-209ENST00000569336 NHP2Q9NX24 153 aaKnown RBP5.7□□□□□ -1.5
CLN6-209ENST00000569336 PAM16Q9Y3D7 125 aa5.7□□□□□ -1.5
CLN6-209ENST00000569336 SPATA45Q537H7 98 aa5.69□□□□□ -1.5
CLN6-209ENST00000569336 LPAP08519 4548 aa5.68□□□□□ -1.5
CLN6-209ENST00000569336 SPINK1P00995 79 aa5.68□□□□□ -1.5
CLN6-209ENST00000569336 VAMP3Q15836 100 aa5.68□□□□□ -1.5
CLN6-209ENST00000569336 C9orf153Q5TBE3 101 aa5.68□□□□□ -1.5
CLN6-209ENST00000569336 SSBP3-AS1Q7Z2R9 100 aa5.68□□□□□ -1.5
CLN6-209ENST00000569336 SPRR1BP22528 89 aa5.67□□□□□ -1.5
CLN6-209ENST00000569336 ST20-AS1Q8NBB2 130 aa5.67□□□□□ -1.5
CLN6-209ENST00000569336 SMIM11BQ8TCY0 68 aa5.67□□□□□ -1.5
CLN6-209ENST00000569336 HIGD1BQ9P298 99 aa5.67□□□□□ -1.5
CLN6-209ENST00000569336 TMEM238LA0A1B0GVL6 79 aa5.66□□□□□ -1.5
CLN6-209ENST00000569336 SLC25A20O43772 301 aa5.66□□□□□ -1.5
CLN6-209ENST00000569336 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
CLN6-209ENST00000569336 C14orf144Q96I85 54 aa5.66□□□□□ -1.5
CLN6-209ENST00000569336 LAMTOR3Q9UHA4 124 aa5.66□□□□□ -1.5
CLN6-209ENST00000569336 TAL2Q16559 108 aa5.65□□□□□ -1.5
CLN6-209ENST00000569336 RETNLBQ9BQ08 111 aa5.65□□□□□ -1.5
CLN6-209ENST00000569336 TEX49A0A1B0GTD5 131 aa5.64□□□□□ -1.51
CLN6-209ENST00000569336 BVES-AS1Q5T3Y7 98 aa5.63□□□□□ -1.51
CLN6-209ENST00000569336 FP248Q71RG6 208 aaPredicted RBP5.63□□□□□ -1.51
CLN6-209ENST00000569336 RAB37Q96AX2 223 aa5.63□□□□□ -1.51
CLN6-209ENST00000569336 C12orf57Q99622 126 aa5.63□□□□□ -1.51
CLN6-209ENST00000569336 IGLV5-48A0A075B6I7 105 aa5.62□□□□□ -1.51
CLN6-209ENST00000569336 DEFB105AQ8NG35 78 aa5.62□□□□□ -1.51
CLN6-209ENST00000569336 IGLV7-46A0A075B6I9 117 aa5.61□□□□□ -1.51
CLN6-209ENST00000569336 A0A0B4J2C4 111 aa5.61□□□□□ -1.51
CLN6-209ENST00000569336 TPRXLQ17RH7 258 aa5.61□□□□□ -1.51
CLN6-209ENST00000569336 Q1RN00 199 aa5.61□□□□□ -1.51
CLN6-209ENST00000569336 PYY3Q5JQD4 70 aa5.61□□□□□ -1.51
CLN6-209ENST00000569336 C2orf91Q6ZV80 131 aa5.61□□□□□ -1.51
CLN6-209ENST00000569336 LIMD2Q9BT23 127 aa5.61□□□□□ -1.51
CLN6-209ENST00000569336 CEND1Q8N111 149 aa5.6□□□□□ -1.51
CLN6-209ENST00000569336 FAT4Q6V0I7 4981 aa5.6□□□□□ -1.51
CLN6-209ENST00000569336 hADV29S1A0JD25 119 aa5.59□□□□□ -1.51
CLN6-209ENST00000569336 F8WEM9 126 aa5.59□□□□□ -1.51
CLN6-209ENST00000569336 SNCGO76070 127 aa5.59□□□□□ -1.51
CLN6-209ENST00000569336 CFC1BP0CG36 223 aa5.59□□□□□ -1.51
CLN6-209ENST00000569336 CFC1P0CG37 223 aa5.59□□□□□ -1.51
CLN6-209ENST00000569336 LINC00575Q6W349 94 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms