RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 TRGC2P03986 189 aa3.21□□□□□ -1.9
CDH13-212ENST00000569144 NDUFA6P56556 154 aa3.21□□□□□ -1.9
CDH13-212ENST00000569144 BAGE3Q86Y29 109 aa3.21□□□□□ -1.9
CDH13-212ENST00000569144 FAM19A2Q8N3H0 131 aa3.21□□□□□ -1.9
CDH13-212ENST00000569144 HSBP1O75506 76 aa3.2□□□□□ -1.9
CDH13-212ENST00000569144 SERF1AO75920 110 aa3.2□□□□□ -1.9
CDH13-212ENST00000569144 PRLHP81277 87 aa3.2□□□□□ -1.9
CDH13-212ENST00000569144 PCOTHQ58A44 107 aa3.2□□□□□ -1.9
CDH13-212ENST00000569144 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
CDH13-212ENST00000569144 Q8NBF4 154 aa3.2□□□□□ -1.9
CDH13-212ENST00000569144 IFI27L1Q96BM0 104 aa3.2□□□□□ -1.9
CDH13-212ENST00000569144 PLEKHB2Q96CS7 222 aa3.2□□□□□ -1.9
CDH13-212ENST00000569144 CHTOPQ9Y3Y2 248 aaKnown RBP3.2□□□□□ -1.9
CDH13-212ENST00000569144 SYNE2Q8WXH0 6885 aaKnown RBP3.19□□□□□ -1.9
CDH13-212ENST00000569144 SCO1O75880 301 aa3.19□□□□□ -1.9
CDH13-212ENST00000569144 RPS29P62273 56 aaKnown RBP3.19□□□□□ -1.9
CDH13-212ENST00000569144 TMEM170BQ5T4T1 132 aa3.19□□□□□ -1.9
CDH13-212ENST00000569144 ADAMTSL4-AS1Q5T5F5 129 aa3.19□□□□□ -1.9
CDH13-212ENST00000569144 FAM19A1Q7Z5A9 133 aa3.19□□□□□ -1.9
CDH13-212ENST00000569144 IGKV2-28A0A075B6P5 120 aa3.18□□□□□ -1.9
CDH13-212ENST00000569144 TMEM223A0PJW6 202 aa3.18□□□□□ -1.9
CDH13-212ENST00000569144 KRTAP4-16G5E9R7 235 aaPredicted RBP3.18□□□□□ -1.9
CDH13-212ENST00000569144 LEPROTL1O95214 131 aa3.18□□□□□ -1.9
CDH13-212ENST00000569144 IGKV2D-28P01615 120 aa3.18□□□□□ -1.9
CDH13-212ENST00000569144 COX6B2Q6YFQ2 88 aa3.18□□□□□ -1.9
CDH13-212ENST00000569144 Q8N377 158 aa3.18□□□□□ -1.9
CDH13-212ENST00000569144 NKAPP1Q8N9T2 125 aa3.18□□□□□ -1.9
CDH13-212ENST00000569144 ZNF625Q96I27 306 aaPredicted RBP3.18□□□□□ -1.9
CDH13-212ENST00000569144 SPRR4Q96PI1 79 aa3.18□□□□□ -1.9
CDH13-212ENST00000569144 ERG28Q9UKR5 140 aa3.18□□□□□ -1.9
CDH13-212ENST00000569144 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
CDH13-212ENST00000569144 HIST1H2BKO60814 126 aa3.17□□□□□ -1.9
CDH13-212ENST00000569144 HIST1H2BJP06899 126 aa3.17□□□□□ -1.9
CDH13-212ENST00000569144 HIST1H2BOP23527 126 aa3.17□□□□□ -1.9
CDH13-212ENST00000569144 HIST1H2BBP33778 126 aa3.17□□□□□ -1.9
CDH13-212ENST00000569144 PFN2P35080 140 aa3.17□□□□□ -1.9
CDH13-212ENST00000569144 HIST1H2BDP58876 126 aa3.17□□□□□ -1.9
CDH13-212ENST00000569144 HIST1H2BCP62807 126 aa3.17□□□□□ -1.9
CDH13-212ENST00000569144 HIST2H2BEQ16778 126 aa3.17□□□□□ -1.9
CDH13-212ENST00000569144 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.17□□□□□ -1.9
CDH13-212ENST00000569144 SFTA2Q6UW10 78 aa3.17□□□□□ -1.9
CDH13-212ENST00000569144 HIST1H2BHQ93079 126 aa3.17□□□□□ -1.9
CDH13-212ENST00000569144 HIST1H2BNQ99877 126 aa3.17□□□□□ -1.9
CDH13-212ENST00000569144 HIST1H2BMQ99879 126 aa3.17□□□□□ -1.9
CDH13-212ENST00000569144 TMEM126AQ9H061 195 aa3.17□□□□□ -1.9
CDH13-212ENST00000569144 SND1-IT1Q9HBX3 110 aa3.17□□□□□ -1.9
CDH13-212ENST00000569144 H0Y8G0 127 aa3.16□□□□□ -1.9
CDH13-212ENST00000569144 SLC25A20O43772 301 aa3.16□□□□□ -1.9
CDH13-212ENST00000569144 COX17Q14061 63 aa3.16□□□□□ -1.9
CDH13-212ENST00000569144 Q8NDZ9 215 aa3.16□□□□□ -1.9
CDH13-212ENST00000569144 HIGD2AQ9BW72 106 aa3.16□□□□□ -1.9
CDH13-212ENST00000569144 HSPB8Q9UJY1 196 aa3.16□□□□□ -1.9
CDH13-212ENST00000569144 ZNF706Q9Y5V0 76 aaPredicted RBP3.16□□□□□ -1.9
CDH13-212ENST00000569144 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
CDH13-212ENST00000569144 TMEM238C9JI98 176 aa3.15□□□□□ -1.91
CDH13-212ENST00000569144 M0R378 163 aa3.15□□□□□ -1.91
CDH13-212ENST00000569144 DPM2O94777 84 aa3.15□□□□□ -1.91
CDH13-212ENST00000569144 FABP4P15090 132 aa3.15□□□□□ -1.91
CDH13-212ENST00000569144 PLNP26678 52 aa3.15□□□□□ -1.91
CDH13-212ENST00000569144 TSPEAR-AS2P59090 65 aa3.15□□□□□ -1.91
CDH13-212ENST00000569144 KRTAP10-12P60413 245 aa3.15□□□□□ -1.91
CDH13-212ENST00000569144 PMCHL2Q9BQD1 86 aa3.15□□□□□ -1.91
CDH13-212ENST00000569144 LEPROTO15243 131 aa3.14□□□□□ -1.91
CDH13-212ENST00000569144 SMIM13P0DJ93 91 aa3.14□□□□□ -1.91
CDH13-212ENST00000569144 HERV-K104P63124 156 aa3.14□□□□□ -1.91
CDH13-212ENST00000569144 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
CDH13-212ENST00000569144 A0A0U1RRA0 63 aa3.13□□□□□ -1.91
CDH13-212ENST00000569144 SYS1-DBNDD2H3BUS1 97 aa3.13□□□□□ -1.91
CDH13-212ENST00000569144 IGKCP01834 107 aa3.13□□□□□ -1.91
CDH13-212ENST00000569144 LINC00158P58513 81 aa3.13□□□□□ -1.91
CDH13-212ENST00000569144 KRTAP10-5P60370 271 aa3.13□□□□□ -1.91
CDH13-212ENST00000569144 MIR7-3HGQ8N6C7 128 aa3.13□□□□□ -1.91
CDH13-212ENST00000569144 MAP1LC3CQ9BXW4 147 aa3.13□□□□□ -1.91
CDH13-212ENST00000569144 MYMXA0A1B0GTQ4 84 aa3.12□□□□□ -1.91
CDH13-212ENST00000569144 KRTAP16-1A8MUX0 517 aa3.12□□□□□ -1.91
CDH13-212ENST00000569144 J3QQQ9 107 aa3.12□□□□□ -1.91
CDH13-212ENST00000569144 HERVK_113P61574 105 aa3.12□□□□□ -1.91
CDH13-212ENST00000569144 MEIG1Q5JSS6 88 aa3.12□□□□□ -1.91
CDH13-212ENST00000569144 LINC01545Q5VT33 79 aa3.12□□□□□ -1.91
CDH13-212ENST00000569144 SSBP3-AS1Q7Z2R9 100 aa3.12□□□□□ -1.91
CDH13-212ENST00000569144 BOD1L2Q8IYS8 172 aa3.12□□□□□ -1.91
CDH13-212ENST00000569144 LOC107984156A0A0G2JMH3 177 aa3.11□□□□□ -1.91
CDH13-212ENST00000569144 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
CDH13-212ENST00000569144 E9PLD3 99 aa3.11□□□□□ -1.91
CDH13-212ENST00000569144 ATP6V1G1O75348 118 aa3.11□□□□□ -1.91
CDH13-212ENST00000569144 LGALS3P17931 250 aaKnown RBP3.11□□□□□ -1.91
CDH13-212ENST00000569144 NMUP48645 174 aa3.11□□□□□ -1.91
CDH13-212ENST00000569144 MOBPQ13875 183 aa3.11□□□□□ -1.91
CDH13-212ENST00000569144 LINC00483Q53H64 154 aa3.11□□□□□ -1.91
CDH13-212ENST00000569144 PET117Q6UWS5 81 aa3.11□□□□□ -1.91
CDH13-212ENST00000569144 ARL17AQ8IVW1 177 aa3.11□□□□□ -1.91
CDH13-212ENST00000569144 C9orf92A6NGG3 77 aa3.1□□□□□ -1.91
CDH13-212ENST00000569144 C3orf79P0CE67 100 aa3.1□□□□□ -1.91
CDH13-212ENST00000569144 S100A1P23297 94 aa3.1□□□□□ -1.91
CDH13-212ENST00000569144 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
CDH13-212ENST00000569144 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
CDH13-212ENST00000569144 A0A0J9YXY3 114 aa3.09□□□□□ -1.91
CDH13-212ENST00000569144 TRBV10-3A0A0K0K1G6 114 aa3.09□□□□□ -1.91
CDH13-212ENST00000569144 NCR3O14931 201 aa3.09□□□□□ -1.91
CDH13-212ENST00000569144 SPRR1AP35321 89 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms