RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 COA6Q5JTJ3 125 aaKnown RBP4.47□□□□□ -1.69
CDH3-209ENST00000569080 Q6ZRX8 168 aa4.47□□□□□ -1.69
CDH3-209ENST00000569080 Q8NBF4 154 aa4.46□□□□□ -1.7
CDH3-209ENST00000569080 MIEN1Q9BRT3 115 aa4.46□□□□□ -1.7
CDH3-209ENST00000569080 PPDPFQ9H3Y8 114 aa4.46□□□□□ -1.7
CDH3-209ENST00000569080 TRAV23DV6A0A075B6W5 121 aa4.45□□□□□ -1.7
CDH3-209ENST00000569080 C3orf79P0CE67 100 aa4.45□□□□□ -1.7
CDH3-209ENST00000569080 NPC2P61916 151 aa4.45□□□□□ -1.7
CDH3-209ENST00000569080 SPAG11AQ6PDA7 123 aa4.45□□□□□ -1.7
CDH3-209ENST00000569080 PET117Q6UWS5 81 aa4.45□□□□□ -1.7
CDH3-209ENST00000569080 TTTY13Q9BZ97 58 aa4.45□□□□□ -1.7
CDH3-209ENST00000569080 IGLV7-46A0A075B6I9 117 aa4.44□□□□□ -1.7
CDH3-209ENST00000569080 ZNF73O43830 326 aaPredicted RBP4.44□□□□□ -1.7
CDH3-209ENST00000569080 TIMM17BO60830 172 aa4.44□□□□□ -1.7
CDH3-209ENST00000569080 LINC00308Q8TCZ7 52 aa4.44□□□□□ -1.7
CDH3-209ENST00000569080 S100A12P80511 92 aa4.43□□□□□ -1.7
CDH3-209ENST00000569080 MOBPQ13875 183 aa4.43□□□□□ -1.7
CDH3-209ENST00000569080 S100A7L2Q5SY68 101 aa4.43□□□□□ -1.7
CDH3-209ENST00000569080 GAGE2AQ6NT46 116 aa4.43□□□□□ -1.7
CDH3-209ENST00000569080 SPANXCQ9NY87 97 aa4.43□□□□□ -1.7
CDH3-209ENST00000569080 ZNF815PA8K554 130 aa4.42□□□□□ -1.7
CDH3-209ENST00000569080 FP248Q71RG6 208 aaPredicted RBP4.42□□□□□ -1.7
CDH3-209ENST00000569080 IGLV9-49A0A0B4J1Y8 123 aa4.41□□□□□ -1.7
CDH3-209ENST00000569080 SPINK1P00995 79 aa4.41□□□□□ -1.7
CDH3-209ENST00000569080 RPS29P62273 56 aaKnown RBP4.41□□□□□ -1.7
CDH3-209ENST00000569080 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
CDH3-209ENST00000569080 ANKRD39Q53RE8 183 aa4.41□□□□□ -1.7
CDH3-209ENST00000569080 ST20-AS1Q8NBB2 130 aa4.41□□□□□ -1.7
CDH3-209ENST00000569080 LCE2BO14633 110 aa4.4□□□□□ -1.71
CDH3-209ENST00000569080 KRTDAPP60985 99 aa4.4□□□□□ -1.71
CDH3-209ENST00000569080 JOSD1Q15040 202 aaPredicted RBP4.4□□□□□ -1.71
CDH3-209ENST00000569080 Q8N377 158 aa4.4□□□□□ -1.71
CDH3-209ENST00000569080 SPANXDQ9BXN6 97 aa4.4□□□□□ -1.71
CDH3-209ENST00000569080 CDIP1Q9H305 208 aa4.4□□□□□ -1.71
CDH3-209ENST00000569080 C5orf52A6NGY3 159 aa4.39□□□□□ -1.71
CDH3-209ENST00000569080 SPRR1BP22528 89 aa4.39□□□□□ -1.71
CDH3-209ENST00000569080 LCE2AQ5TA79 106 aaPredicted RBP4.39□□□□□ -1.71
CDH3-209ENST00000569080 SSBP3-AS1Q7Z2R9 100 aa4.39□□□□□ -1.71
CDH3-209ENST00000569080 ELOF1P60002 83 aaKnown RBP4.38□□□□□ -1.71
CDH3-209ENST00000569080 ATOH7Q8N100 152 aa4.38□□□□□ -1.71
CDH3-209ENST00000569080 CBY1Q9Y3M2 126 aa4.38□□□□□ -1.71
CDH3-209ENST00000569080 C20orf202A1L168 122 aa4.37□□□□□ -1.71
CDH3-209ENST00000569080 C6orf99Q4VX62 202 aa4.37□□□□□ -1.71
CDH3-209ENST00000569080 PCP2Q8IVA1 136 aa4.37□□□□□ -1.71
CDH3-209ENST00000569080 OR13C6PQ8NH95 151 aa4.37□□□□□ -1.71
CDH3-209ENST00000569080 A0A0U1RQV1 116 aa4.36□□□□□ -1.71
CDH3-209ENST00000569080 C9orf153Q5TBE3 101 aa4.36□□□□□ -1.71
CDH3-209ENST00000569080 SCGB1D4Q6XE38 83 aa4.36□□□□□ -1.71
CDH3-209ENST00000569080 LINC00518Q8N0U6 118 aa4.36□□□□□ -1.71
CDH3-209ENST00000569080 DHRS4-AS1Q9P1J3 65 aa4.36□□□□□ -1.71
CDH3-209ENST00000569080 SLC25A20O43772 301 aa4.35□□□□□ -1.71
CDH3-209ENST00000569080 IFITM1P13164 125 aa4.35□□□□□ -1.71
CDH3-209ENST00000569080 COX7BP24311 80 aa4.35□□□□□ -1.71
CDH3-209ENST00000569080 HINT1P49773 126 aaPredicted RBP4.35□□□□□ -1.71
CDH3-209ENST00000569080 ASB16-AS1Q495Z4 193 aa4.35□□□□□ -1.71
CDH3-209ENST00000569080 HIST3H2BBQ8N257 126 aa4.35□□□□□ -1.71
CDH3-209ENST00000569080 TRBV7-6A0A0J9YX20 115 aa4.34□□□□□ -1.71
CDH3-209ENST00000569080 LINC01547P58512 204 aaPredicted RBP4.34□□□□□ -1.71
CDH3-209ENST00000569080 Q6ZVH6 145 aa4.34□□□□□ -1.71
CDH3-209ENST00000569080 HIST1H2BLQ99880 126 aa4.34□□□□□ -1.71
CDH3-209ENST00000569080 KRTAP4-1Q9BYQ7 146 aa4.34□□□□□ -1.71
CDH3-209ENST00000569080 IGLV5-48A0A075B6I7 105 aa4.33□□□□□ -1.72
CDH3-209ENST00000569080 AKR1D1P51857 326 aa4.33□□□□□ -1.72
CDH3-209ENST00000569080 XP32Q5T750 250 aa4.33□□□□□ -1.72
CDH3-209ENST00000569080 SMIM29Q86T20 159 aa4.33□□□□□ -1.72
CDH3-209ENST00000569080 MUSTN1Q8IVN3 82 aa4.33□□□□□ -1.72
CDH3-209ENST00000569080 A0A1B0GWB2 263 aa4.32□□□□□ -1.72
CDH3-209ENST00000569080 A6NJY4 79 aa4.32□□□□□ -1.72
CDH3-209ENST00000569080 SNRPEP62304 92 aaKnown RBP4.32□□□□□ -1.72
CDH3-209ENST00000569080 SLC25A34Q6PIV7 304 aa4.32□□□□□ -1.72
CDH3-209ENST00000569080 COPS9Q8WXC6 57 aa4.32□□□□□ -1.72
CDH3-209ENST00000569080 Q1RN00 199 aa4.31□□□□□ -1.72
CDH3-209ENST00000569080 LAMTOR3Q9UHA4 124 aa4.31□□□□□ -1.72
CDH3-209ENST00000569080 TEX49A0A1B0GTD5 131 aa4.3□□□□□ -1.72
CDH3-209ENST00000569080 A6NDN8 102 aa4.3□□□□□ -1.72
CDH3-209ENST00000569080 SMIM11BQ8TCY0 68 aa4.3□□□□□ -1.72
CDH3-209ENST00000569080 LIMD2Q9BT23 127 aa4.3□□□□□ -1.72
CDH3-209ENST00000569080 TRAV13-2A0A0B4J235 113 aa4.29□□□□□ -1.72
CDH3-209ENST00000569080 S100A1P23297 94 aa4.29□□□□□ -1.72
CDH3-209ENST00000569080 CD164Q04900 197 aa4.29□□□□□ -1.72
CDH3-209ENST00000569080 HRCT1Q6UXD1 115 aa4.29□□□□□ -1.72
CDH3-209ENST00000569080 DEFB105AQ8NG35 78 aa4.29□□□□□ -1.72
CDH3-209ENST00000569080 A0A0G2JQZ4 141 aa4.28□□□□□ -1.72
CDH3-209ENST00000569080 A4D1N5 150 aa4.28□□□□□ -1.72
CDH3-209ENST00000569080 S100A2P29034 98 aa4.28□□□□□ -1.72
CDH3-209ENST00000569080 SEC61BP60468 96 aaKnown RBP4.28□□□□□ -1.72
CDH3-209ENST00000569080 TAL2Q16559 108 aa4.28□□□□□ -1.72
CDH3-209ENST00000569080 Q5XG85 94 aa4.28□□□□□ -1.72
CDH3-209ENST00000569080 PRO1933Q9H354 126 aa4.28□□□□□ -1.72
CDH3-209ENST00000569080 KRTAP9-2Q9BYQ4 174 aa4.27□□□□□ -1.73
CDH3-209ENST00000569080 HSBP1L1C9JCN9 74 aa4.26□□□□□ -1.73
CDH3-209ENST00000569080 LINC00575Q6W349 94 aa4.26□□□□□ -1.73
CDH3-209ENST00000569080 NHP2Q9NX24 153 aaKnown RBP4.26□□□□□ -1.73
CDH3-209ENST00000569080 H7C2G1 150 aa4.25□□□□□ -1.73
CDH3-209ENST00000569080 S100A6P06703 90 aa4.25□□□□□ -1.73
CDH3-209ENST00000569080 KRTAP19-2Q3LHN2 52 aa4.25□□□□□ -1.73
CDH3-209ENST00000569080 C1orf195Q5TG92 126 aa4.25□□□□□ -1.73
CDH3-209ENST00000569080 COX8AP10176 69 aa4.24□□□□□ -1.73
CDH3-209ENST00000569080 LCE2CQ5TA81 110 aa4.24□□□□□ -1.73
CDH3-209ENST00000569080 Q6ZQY7 126 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms