RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 EPM2AB3EWF7 344 aa4.82□□□□□ -1.64
SMG1-214ENST00000568038 M0R378 163 aa4.82□□□□□ -1.64
SMG1-214ENST00000568038 CDK2AP2O75956 126 aa4.82□□□□□ -1.64
SMG1-214ENST00000568038 NDUFC2O95298 119 aa4.82□□□□□ -1.64
SMG1-214ENST00000568038 UBE2BP63146 152 aa4.82□□□□□ -1.64
SMG1-214ENST00000568038 TAL2Q16559 108 aa4.82□□□□□ -1.64
SMG1-214ENST00000568038 LBHQ53QV2 105 aaPredicted RBP4.82□□□□□ -1.64
SMG1-214ENST00000568038 MRPL55Q7Z7F7 128 aaKnown RBP4.82□□□□□ -1.64
SMG1-214ENST00000568038 C7orf33Q8WU49 177 aa4.82□□□□□ -1.64
SMG1-214ENST00000568038 LINC00167Q96N53 147 aa4.82□□□□□ -1.64
SMG1-214ENST00000568038 CTAG1AP78358 180 aa4.81□□□□□ -1.64
SMG1-214ENST00000568038 HSD52Q0P140 79 aa4.81□□□□□ -1.64
SMG1-214ENST00000568038 KRTAP5-11Q6L8G4 156 aa4.81□□□□□ -1.64
SMG1-214ENST00000568038 KRTAP11-1Q8IUC1 163 aa4.81□□□□□ -1.64
SMG1-214ENST00000568038 CEND1Q8N111 149 aa4.81□□□□□ -1.64
SMG1-214ENST00000568038 OR13C6PQ8NH95 151 aa4.81□□□□□ -1.64
SMG1-214ENST00000568038 DNAH11Q96DT5 4516 aa4.8□□□□□ -1.64
SMG1-214ENST00000568038 IGKV2-28A0A075B6P5 120 aa4.8□□□□□ -1.64
SMG1-214ENST00000568038 TRBV10-3A0A0K0K1G6 114 aa4.8□□□□□ -1.64
SMG1-214ENST00000568038 TRBV10-2A0A0K0K1G8 114 aa4.8□□□□□ -1.64
SMG1-214ENST00000568038 IGKV2D-28P01615 120 aa4.8□□□□□ -1.64
SMG1-214ENST00000568038 S100A7L2Q5SY68 101 aa4.8□□□□□ -1.64
SMG1-214ENST00000568038 LINC00337Q8N6G1 96 aa4.8□□□□□ -1.64
SMG1-214ENST00000568038 PPDPFQ9H3Y8 114 aa4.8□□□□□ -1.64
SMG1-214ENST00000568038 PKD1P98161 4303 aa4.79□□□□□ -1.64
SMG1-214ENST00000568038 IGLV1-50A0A075B6I6 118 aa4.79□□□□□ -1.64
SMG1-214ENST00000568038 A6NDN8 102 aa4.79□□□□□ -1.64
SMG1-214ENST00000568038 DDTP30046 118 aa4.79□□□□□ -1.64
SMG1-214ENST00000568038 FXYD2P54710 66 aa4.79□□□□□ -1.64
SMG1-214ENST00000568038 HINT1P49773 126 aaPredicted RBP4.78□□□□□ -1.64
SMG1-214ENST00000568038 TRAV13-2A0A0B4J235 113 aa4.77□□□□□ -1.65
SMG1-214ENST00000568038 IGLV6-57P01721 117 aa4.77□□□□□ -1.65
SMG1-214ENST00000568038 CFC1BP0CG36 223 aa4.77□□□□□ -1.65
SMG1-214ENST00000568038 CFC1P0CG37 223 aa4.77□□□□□ -1.65
SMG1-214ENST00000568038 RPL37AP61513 92 aaKnown RBP4.77□□□□□ -1.65
SMG1-214ENST00000568038 BVES-AS1Q5T3Y7 98 aa4.77□□□□□ -1.65
SMG1-214ENST00000568038 RAB37Q96AX2 223 aa4.77□□□□□ -1.65
SMG1-214ENST00000568038 TMEM126AQ9H061 195 aa4.77□□□□□ -1.65
SMG1-214ENST00000568038 NHP2Q9NX24 153 aaKnown RBP4.77□□□□□ -1.65
SMG1-214ENST00000568038 PSORS1C2Q9UIG4 136 aa4.77□□□□□ -1.65
SMG1-214ENST00000568038 DNAH5Q8TE73 4624 aa4.77□□□□□ -1.65
SMG1-214ENST00000568038 PCP4L1A6NKN8 68 aa4.76□□□□□ -1.65
SMG1-214ENST00000568038 M0R143 59 aa4.76□□□□□ -1.65
SMG1-214ENST00000568038 RPL13AP40429 203 aaKnown RBP4.76□□□□□ -1.65
SMG1-214ENST00000568038 C1orf137Q5JT78 98 aa4.76□□□□□ -1.65
SMG1-214ENST00000568038 REG3GQ6UW15 175 aa4.76□□□□□ -1.65
SMG1-214ENST00000568038 PRR26Q8N8Z3 221 aa4.76□□□□□ -1.65
SMG1-214ENST00000568038 KCNQ1DNQ9H478 68 aa4.76□□□□□ -1.65
SMG1-214ENST00000568038 TRAV23DV6A0A075B6W5 121 aa4.75□□□□□ -1.65
SMG1-214ENST00000568038 A0A0B4J2C4 111 aa4.75□□□□□ -1.65
SMG1-214ENST00000568038 H7C2G1 150 aa4.75□□□□□ -1.65
SMG1-214ENST00000568038 K7ERJ3 54 aa4.75□□□□□ -1.65
SMG1-214ENST00000568038 BATFQ16520 125 aa4.75□□□□□ -1.65
SMG1-214ENST00000568038 PKHD1P08F94 4074 aa4.75□□□□□ -1.65
SMG1-214ENST00000568038 DYNC1H1Q14204 4646 aaKnown RBP4.74□□□□□ -1.65
SMG1-214ENST00000568038 LRP1BQ9NZR2 4599 aa4.74□□□□□ -1.65
SMG1-214ENST00000568038 ZNF73O43830 326 aaPredicted RBP4.74□□□□□ -1.65
SMG1-214ENST00000568038 BCE1O60756 84 aa4.74□□□□□ -1.65
SMG1-214ENST00000568038 Q5VSD8 79 aa4.74□□□□□ -1.65
SMG1-214ENST00000568038 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.74□□□□□ -1.65
SMG1-214ENST00000568038 FAM19A1Q7Z5A9 133 aa4.74□□□□□ -1.65
SMG1-214ENST00000568038 SMIM11BQ8TCY0 68 aa4.74□□□□□ -1.65
SMG1-214ENST00000568038 PRO1854Q9UHT4 67 aa4.74□□□□□ -1.65
SMG1-214ENST00000568038 CBY1Q9Y3M2 126 aa4.74□□□□□ -1.65
SMG1-214ENST00000568038 EPPK1P58107 5090 aaKnown RBP4.74□□□□□ -1.65
SMG1-214ENST00000568038 HECTD4Q9Y4D8 3996 aa4.73□□□□□ -1.65
SMG1-214ENST00000568038 ETDCA0A1B0GVM5 59 aa4.73□□□□□ -1.65
SMG1-214ENST00000568038 IGLV7-43P04211 117 aa4.73□□□□□ -1.65
SMG1-214ENST00000568038 UBE2AP49459 152 aa4.73□□□□□ -1.65
SMG1-214ENST00000568038 PRLHP81277 87 aa4.73□□□□□ -1.65
SMG1-214ENST00000568038 Q1RN00 199 aa4.73□□□□□ -1.65
SMG1-214ENST00000568038 C6orf99Q4VX62 202 aa4.73□□□□□ -1.65
SMG1-214ENST00000568038 DIRC1Q969H9 104 aa4.73□□□□□ -1.65
SMG1-214ENST00000568038 A0A1B0GWB2 263 aa4.72□□□□□ -1.65
SMG1-214ENST00000568038 SPRR1AP35321 89 aa4.72□□□□□ -1.65
SMG1-214ENST00000568038 KRTAP4-16G5E9R7 235 aaPredicted RBP4.71□□□□□ -1.66
SMG1-214ENST00000568038 MT3P25713 68 aa4.71□□□□□ -1.66
SMG1-214ENST00000568038 KRTAP10-4P60372 401 aaPredicted RBP4.71□□□□□ -1.66
SMG1-214ENST00000568038 ZNF861PO60384 105 aa4.7□□□□□ -1.66
SMG1-214ENST00000568038 TSPAN13O95857 204 aa4.7□□□□□ -1.66
SMG1-214ENST00000568038 COX7BP24311 80 aa4.7□□□□□ -1.66
SMG1-214ENST00000568038 RPL28P46779 137 aaKnown RBP4.7□□□□□ -1.66
SMG1-214ENST00000568038 HIGD2AQ9BW72 106 aa4.7□□□□□ -1.66
SMG1-214ENST00000568038 SNHG12Q9BXW3 62 aa4.7□□□□□ -1.66
SMG1-214ENST00000568038 DNAH8Q96JB1 4490 aa4.7□□□□□ -1.66
SMG1-214ENST00000568038 PSMB2P49721 201 aa4.69□□□□□ -1.66
SMG1-214ENST00000568038 VAMP3Q15836 100 aa4.69□□□□□ -1.66
SMG1-214ENST00000568038 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
SMG1-214ENST00000568038 Q6ZRX8 168 aa4.69□□□□□ -1.66
SMG1-214ENST00000568038 KRTAP13-1Q8IUC0 172 aa4.69□□□□□ -1.66
SMG1-214ENST00000568038 H0Y9J4 135 aa4.68□□□□□ -1.66
SMG1-214ENST00000568038 ELOF1P60002 83 aaKnown RBP4.68□□□□□ -1.66
SMG1-214ENST00000568038 SMCR5Q8TEV8 140 aa4.68□□□□□ -1.66
SMG1-214ENST00000568038 NAA38Q9BRA0 125 aaKnown RBP4.68□□□□□ -1.66
SMG1-214ENST00000568038 Q9BRP9 147 aa4.68□□□□□ -1.66
SMG1-214ENST00000568038 APOBP04114 4563 aaKnown RBP4.67□□□□□ -1.66
SMG1-214ENST00000568038 TRBV7-6A0A0J9YX20 115 aa4.67□□□□□ -1.66
SMG1-214ENST00000568038 ERC2-IT1O76042 136 aa4.67□□□□□ -1.66
SMG1-214ENST00000568038 SPINK6Q6UWN8 80 aa4.67□□□□□ -1.66
SMG1-214ENST00000568038 BIRC6Q9NR09 4857 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms