RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 IGKV2D-26A0A0A0MRZ7 120 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 IGHV3-21A0A0B4J1V1 117 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 A0A0J9YY99 117 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 H0YGX0 51 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 IGKV4-1P06312 121 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 BAALC-AS2P0C853 105 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 TSPEAR-AS2P59090 65 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 FXYD4P59646 89 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 BRD3OSQ6XYD6 125 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 DEFB106AQ8N104 65 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 CNEP1R1Q8N9A8 125 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 ARHGAP5-AS1Q96IT6 56 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 TMEM14CQ9P0S9 112 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 CMYA5Q8N3K9 4069 aa1.78□□□□□ -2.12
HERPUD1-212ENST00000567944 DOCK11Q5JSL3 2073 aa1.78□□□□□ -2.13
HERPUD1-212ENST00000567944 IGHV3-43A0A0B4J1X8 118 aa1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 IGKV3D-7A0A0C4DH55 119 aa1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 M0R135 149 aa1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 HMGN4O00479 90 aa1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 IGLV2-8P01709 118 aa1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 CRPP02741 224 aa1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 IGHV3-30-3P0DP02 117 aa1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 RPL28P46779 137 aaKnown RBP1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 SFTA2Q6UW10 78 aa1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 SMCR5Q8TEV8 140 aa1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 AMELXQ99217 191 aa1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 SMR3AQ99954 134 aa1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 CHCHD7Q9BUK0 85 aa1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 CYSTM1Q9H1C7 97 aa1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 ORMDL1Q9P0S3 153 aa1.77□□□□□ -2.13
HERPUD1-212ENST00000567944 TENM3Q9P273 2699 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 IGHV3-49A0A0A0MS15 119 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 IGKV1-12A0A0C4DH73 117 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 TRBV7-4A0A0J9YYF1 115 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 H7C2G1 150 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 NDUFA3O95167 84 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 LHBP01229 141 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 IGKV1D-33P01593 117 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 IGKV1-33P01594 117 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 IGKV1D-12P01611 117 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 IAPPP10997 89 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 ZNF137PP52743 207 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 GDF5OSQ5U4N7 250 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 LYPD6Q86Y78 171 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 KLF14Q8TD94 323 aaPredicted RBP1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 B9D2Q9BPU9 175 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 SND1-IT1Q9HBX3 110 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 MRPL36Q9P0J6 103 aaKnown RBP1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 LENEPQ9Y5L5 61 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 LHFPL6Q9Y693 200 aa1.76□□□□□ -2.13
HERPUD1-212ENST00000567944 PLXNB1O43157 2135 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 IGLV3-9A0A075B6K5 115 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 IGHV3-73A0A0B4J1V6 119 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 TRAV21A0A0B4J279 112 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 LOC101927531A0A1B0GV80 90 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 E7EUB6 86 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 PSCAO43653 123 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 P0C880 135 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 CD24P25063 80 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 CMC4P56277 68 aaPredicted RBP1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 NREPQ16612 68 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 DEFB113Q30KQ7 82 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 Q5VV11 94 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 ZNF833PQ6ZTB9 187 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 Q86TA4 180 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 ZFAND2AQ8N6M9 145 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 Q8N814 137 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 Q9BRP9 147 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 TTTY13Q9BZ97 58 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 BPESC1Q9GZL8 116 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 CDC42SE2Q9NRR3 84 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 C22orf24Q9Y442 160 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 SNURFQ9Y675 71 aa1.75□□□□□ -2.13
HERPUD1-212ENST00000567944 TRAV12-3A0A0B4J271 114 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 IGHV1-3A0A0C4DH29 117 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 TRBV10-1A0A0K0K1A3 114 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 TRBV6-5A0A0K0K1A5 114 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 H3BPC8 53 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 I3L3M4 83 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 LY6HO94772 140 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 IGKV1-39P01597 117 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 IGKV1D-39P04432 117 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 CCL3P10147 92 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 ERHP84090 104 aaKnown RBP1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 LINC01590Q5TEZ4 76 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 SPINT4Q6UDR6 99 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 LYZL1Q6UWQ5 148 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 ENHOQ6UWT2 76 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 Q8IYB0 196 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 C1orf64Q8NEQ6 169 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 OBSCN-AS1Q96MR7 158 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 PRR15LQ9BU68 103 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 LINC00574Q9H8X3 128 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 PROK2Q9HC23 129 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 LINC00846Q9NV44 126 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 STAB2Q8WWQ8 2551 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 RYR3Q15413 4870 aa1.74□□□□□ -2.13
HERPUD1-212ENST00000567944 ARHGAP32A7KAX9 2087 aa1.73□□□□□ -2.13
HERPUD1-212ENST00000567944 IGLV10-54A0A075B6I4 117 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms