RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 S100A1P23297 94 aa5.26□□□□□ -1.57
CDH13-210ENST00000567445 ZNF706Q9Y5V0 76 aaPredicted RBP5.26□□□□□ -1.57
CDH13-210ENST00000567445 TRAV12-1A0A0B4J245 112 aa5.24□□□□□ -1.57
CDH13-210ENST00000567445 SMIM13P0DJ93 91 aa5.24□□□□□ -1.57
CDH13-210ENST00000567445 BOD1L2Q8IYS8 172 aa5.24□□□□□ -1.57
CDH13-210ENST00000567445 IFI27L1Q96BM0 104 aa5.24□□□□□ -1.57
CDH13-210ENST00000567445 APOC3P02656 99 aa5.23□□□□□ -1.57
CDH13-210ENST00000567445 SPRR1AP35321 89 aa5.23□□□□□ -1.57
CDH13-210ENST00000567445 C5orf47Q569G3 176 aa5.23□□□□□ -1.57
CDH13-210ENST00000567445 MEIG1Q5JSS6 88 aa5.23□□□□□ -1.57
CDH13-210ENST00000567445 FP248Q71RG6 208 aaPredicted RBP5.23□□□□□ -1.57
CDH13-210ENST00000567445 LINC00337Q8N6G1 96 aa5.23□□□□□ -1.57
CDH13-210ENST00000567445 CHCHD1Q96BP2 118 aaKnown RBP5.23□□□□□ -1.57
CDH13-210ENST00000567445 KCNQ1DNQ9H478 68 aa5.23□□□□□ -1.57
CDH13-210ENST00000567445 V9GYY9 64 aa5.23□□□□□ -1.57
CDH13-210ENST00000567445 MUC17Q685J3 4493 aa5.22□□□□□ -1.57
CDH13-210ENST00000567445 A0A1B0GWB2 263 aa5.22□□□□□ -1.57
CDH13-210ENST00000567445 NCR3O14931 201 aa5.22□□□□□ -1.57
CDH13-210ENST00000567445 SNAPINO95295 136 aa5.22□□□□□ -1.57
CDH13-210ENST00000567445 MIR7-3HGQ8N6C7 128 aa5.22□□□□□ -1.57
CDH13-210ENST00000567445 PRAC1Q96KF2 57 aa5.22□□□□□ -1.57
CDH13-210ENST00000567445 ETDCA0A1B0GVM5 59 aa5.21□□□□□ -1.58
CDH13-210ENST00000567445 LINC00587B1AMM8 73 aa5.21□□□□□ -1.58
CDH13-210ENST00000567445 KRTAP4-16G5E9R7 235 aaPredicted RBP5.21□□□□□ -1.58
CDH13-210ENST00000567445 SVBPQ8N300 66 aa5.21□□□□□ -1.58
CDH13-210ENST00000567445 Q8NBF4 154 aa5.21□□□□□ -1.58
CDH13-210ENST00000567445 SMCR5Q8TEV8 140 aa5.21□□□□□ -1.58
CDH13-210ENST00000567445 TRBV10-3A0A0K0K1G6 114 aa5.2□□□□□ -1.58
CDH13-210ENST00000567445 DAND5Q8N907 189 aa5.2□□□□□ -1.58
CDH13-210ENST00000567445 NDUFA12Q9UI09 145 aa5.2□□□□□ -1.58
CDH13-210ENST00000567445 MYMXA0A1B0GTQ4 84 aa5.2□□□□□ -1.58
CDH13-210ENST00000567445 SPINK1P00995 79 aa5.2□□□□□ -1.58
CDH13-210ENST00000567445 S100A12P80511 92 aa5.2□□□□□ -1.58
CDH13-210ENST00000567445 LINC00483Q53H64 154 aa5.2□□□□□ -1.58
CDH13-210ENST00000567445 YPEL4Q96NS1 127 aa5.2□□□□□ -1.58
CDH13-210ENST00000567445 KRTAP13-3Q3SY46 172 aa5.19□□□□□ -1.58
CDH13-210ENST00000567445 LOC107984156A0A0G2JMH3 177 aa5.18□□□□□ -1.58
CDH13-210ENST00000567445 E9PLD3 99 aa5.18□□□□□ -1.58
CDH13-210ENST00000567445 ARL17AQ8IVW1 177 aa5.18□□□□□ -1.58
CDH13-210ENST00000567445 FAM19A2Q8N3H0 131 aa5.18□□□□□ -1.58
CDH13-210ENST00000567445 TRBV10-2A0A0K0K1G8 114 aa5.17□□□□□ -1.58
CDH13-210ENST00000567445 TSPEAR-AS2P59090 65 aa5.17□□□□□ -1.58
CDH13-210ENST00000567445 LEPROTO15243 131 aa5.16□□□□□ -1.58
CDH13-210ENST00000567445 ERC2-IT1O76042 136 aa5.16□□□□□ -1.58
CDH13-210ENST00000567445 DDTP30046 118 aa5.16□□□□□ -1.58
CDH13-210ENST00000567445 RPS29P62273 56 aaKnown RBP5.16□□□□□ -1.58
CDH13-210ENST00000567445 ASB16-AS1Q495Z4 193 aa5.16□□□□□ -1.58
CDH13-210ENST00000567445 PLNP26678 52 aa5.15□□□□□ -1.58
CDH13-210ENST00000567445 MOBPQ13875 183 aa5.15□□□□□ -1.58
CDH13-210ENST00000567445 Q6ZRX8 168 aa5.15□□□□□ -1.58
CDH13-210ENST00000567445 SSBP3-AS1Q7Z2R9 100 aa5.15□□□□□ -1.58
CDH13-210ENST00000567445 Q9BRP9 147 aa5.15□□□□□ -1.58
CDH13-210ENST00000567445 SPANXB1Q9NS25 103 aaPredicted RBP5.15□□□□□ -1.58
CDH13-210ENST00000567445 J3QQQ9 107 aa5.14□□□□□ -1.59
CDH13-210ENST00000567445 LEPROTL1O95214 131 aa5.14□□□□□ -1.59
CDH13-210ENST00000567445 NMUP48645 174 aa5.14□□□□□ -1.59
CDH13-210ENST00000567445 SLC25A20O43772 301 aa5.13□□□□□ -1.59
CDH13-210ENST00000567445 NDUFC2O95298 119 aa5.13□□□□□ -1.59
CDH13-210ENST00000567445 IGLV6-57P01721 117 aa5.13□□□□□ -1.59
CDH13-210ENST00000567445 Q8N377 158 aa5.13□□□□□ -1.59
CDH13-210ENST00000567445 MIEN1Q9BRT3 115 aa5.13□□□□□ -1.59
CDH13-210ENST00000567445 SERF1AO75920 110 aa5.13□□□□□ -1.59
CDH13-210ENST00000567445 DPM2O94777 84 aa5.13□□□□□ -1.59
CDH13-210ENST00000567445 TRGC2P03986 189 aa5.13□□□□□ -1.59
CDH13-210ENST00000567445 LGALS3P17931 250 aaKnown RBP5.13□□□□□ -1.59
CDH13-210ENST00000567445 HERVK_113P61574 105 aa5.13□□□□□ -1.59
CDH13-210ENST00000567445 JOSD1Q15040 202 aaPredicted RBP5.13□□□□□ -1.59
CDH13-210ENST00000567445 TAL2Q16559 108 aa5.13□□□□□ -1.59
CDH13-210ENST00000567445 S100A7L2Q5SY68 101 aa5.13□□□□□ -1.59
CDH13-210ENST00000567445 OCR1Q9BZK8 76 aa5.13□□□□□ -1.59
CDH13-210ENST00000567445 NDUFV3P56181 108 aaKnown RBP5.12□□□□□ -1.59
CDH13-210ENST00000567445 HSPB8Q9UJY1 196 aa5.12□□□□□ -1.59
CDH13-210ENST00000567445 TRAV23DV6A0A075B6W5 121 aa5.11□□□□□ -1.59
CDH13-210ENST00000567445 IGKCP01834 107 aa5.11□□□□□ -1.59
CDH13-210ENST00000567445 FABP4P15090 132 aa5.11□□□□□ -1.59
CDH13-210ENST00000567445 LINC01547P58512 204 aaPredicted RBP5.11□□□□□ -1.59
CDH13-210ENST00000567445 PMCHL2Q9BQD1 86 aa5.11□□□□□ -1.59
CDH13-210ENST00000567445 KRTAP4-1Q9BYQ7 146 aa5.11□□□□□ -1.59
CDH13-210ENST00000567445 COLCA2A8K830 154 aa5.1□□□□□ -1.59
CDH13-210ENST00000567445 ZNF73O43830 326 aaPredicted RBP5.1□□□□□ -1.59
CDH13-210ENST00000567445 C9orf153Q5TBE3 101 aa5.1□□□□□ -1.59
CDH13-210ENST00000567445 ADAMTSL4-AS1Q5T5F5 129 aa5.09□□□□□ -1.59
CDH13-210ENST00000567445 SOSTDC1Q6X4U4 206 aa5.09□□□□□ -1.59
CDH13-210ENST00000567445 A0A0J9YXY3 114 aa5.08□□□□□ -1.6
CDH13-210ENST00000567445 NPC2P61916 151 aa5.08□□□□□ -1.6
CDH13-210ENST00000567445 ST20-AS1Q8NBB2 130 aa5.08□□□□□ -1.6
CDH13-210ENST00000567445 HINT1P49773 126 aaPredicted RBP5.07□□□□□ -1.6
CDH13-210ENST00000567445 A6NDN8 102 aa5.07□□□□□ -1.6
CDH13-210ENST00000567445 HIST1H4GQ99525 98 aa5.06□□□□□ -1.6
CDH13-210ENST00000567445 SPANXCQ9NY87 97 aa5.06□□□□□ -1.6
CDH13-210ENST00000567445 SPRR1BP22528 89 aa5.05□□□□□ -1.6
CDH13-210ENST00000567445 SLC25A34Q6PIV7 304 aa5.05□□□□□ -1.6
CDH13-210ENST00000567445 LITAFQ99732 161 aa5.05□□□□□ -1.6
CDH13-210ENST00000567445 DHRS4-AS1Q9P1J3 65 aa5.05□□□□□ -1.6
CDH13-210ENST00000567445 SMIM29Q86T20 159 aa5.04□□□□□ -1.6
CDH13-210ENST00000567445 OR13C6PQ8NH95 151 aa5.04□□□□□ -1.6
CDH13-210ENST00000567445 LINC00308Q8TCZ7 52 aa5.04□□□□□ -1.6
CDH13-210ENST00000567445 LIMD2Q9BT23 127 aa5.04□□□□□ -1.6
CDH13-210ENST00000567445 SYS1-DBNDD2H3BUS1 97 aa5.03□□□□□ -1.6
CDH13-210ENST00000567445 TIMM17BO60830 172 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms