RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 MGAM2Q2M2H8 2515 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 ZZEF1O43149 2961 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 ANKRD36CQ5JPF3 1778 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 ACACBO00763 2458 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 CMYA5Q8N3K9 4069 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 EIF4G3O43432 1585 aaKnown RBP-0.53□□□□□ -2.49
CDH1-211ENST00000567320 NWD1Q149M9 1564 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.53□□□□□ -2.49
CDH1-211ENST00000567320 PRDM15P57071 1507 aaPredicted RBP-0.53□□□□□ -2.49
CDH1-211ENST00000567320 AKAP9Q99996 3911 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 TRBV25-1A0A075B6N4 114 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 NAP1L6A6NFF2 107 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 TMEM262E9PQX1 116 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 SNAPC5O75971 98 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 AKAIN1P0CW23 69 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 MT1GP13640 62 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 COX7BP24311 80 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 ATP5EP56381 51 aaPredicted RBP-0.53□□□□□ -2.49
CDH1-211ENST00000567320 PRLHP81277 87 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 DEFB106AQ8N104 65 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 PP6455Q8WZ26 134 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 PSENENQ9NZ42 101 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 RGPD8O14715 1765 aaPredicted RBP-0.53□□□□□ -2.49
CDH1-211ENST00000567320 RGPD5Q99666 1765 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 CDC42BPAQ5VT25 1732 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 TMEM131LA2VDJ0 1609 aa-0.53□□□□□ -2.49
CDH1-211ENST00000567320 ANKRD11Q6UB99 2663 aaPredicted RBP-0.53□□□□□ -2.49
CDH1-211ENST00000567320 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.53□□□□□ -2.49
CDH1-211ENST00000567320 RAPGEF2Q9Y4G8 1499 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 ACACAQ13085 2346 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 ANKRD36BQ8N2N9 1353 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 PARP4Q9UKK3 1724 aaKnown RBP-0.54□□□□□ -2.5
CDH1-211ENST00000567320 UNC13AQ9UPW8 1703 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 A0A1B0GV90 55 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 FAM24AA6NFZ4 105 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 K7EP34 96 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 KALRNO60229 2985 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 SELENOWP63302 87 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 C1orf54Q8WWF1 131 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 CGREF1Q99674 301 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 FAM107BQ9H098 131 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 CLTCQ00610 1675 aaKnown RBP-0.54□□□□□ -2.5
CDH1-211ENST00000567320 ITSN2Q9NZM3 1697 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 TRANK1O15050 2925 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 WDR87Q6ZQQ6 2873 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 DNAH17Q9UFH2 4485 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 DEPDC5O75140 1603 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 TEX15Q9BXT5 2789 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 ZFYVE16Q7Z3T8 1539 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 DNAH8Q96JB1 4490 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 TEX14Q8IWB6 1497 aa-0.54□□□□□ -2.5
CDH1-211ENST00000567320 NAIPQ13075 1403 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 EYSQ5T1H1 3165 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 ABCA13Q86UQ4 5058 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 MYO3AQ8NEV4 1616 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 F8WEM9 126 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 GNGT2O14610 69 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 MT-ATP8P03928 68 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 MT1EP04732 61 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 UQCRHP07919 91 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 DEFB130BP0DP73 79 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 DEFB130AP0DP74 79 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 IAPPP10997 89 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 LINC00158P58513 81 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 PMCHL1Q16048 86 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 KRTAP8-1Q8IUC2 63 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 MT1LQ93083 61 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 TRGV9Q99603 122 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 PAIP2BQ9ULR5 123 aaKnown RBP-0.55□□□□□ -2.5
CDH1-211ENST00000567320 UBE2D4Q9Y2X8 147 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 MTORP42345 2549 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 PKD1L2Q7Z442 2459 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 MAGI3Q5TCQ9 1506 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 ABCC2Q92887 1545 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 CSMD1Q96PZ7 3565 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 LTN1O94822 1766 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 ATP7BP35670 1465 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 PDE4DIPQ5VU43 2346 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 TOGARAM1Q9Y4F4 1720 aa-0.55□□□□□ -2.5
CDH1-211ENST00000567320 PLCH1Q4KWH8 1693 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 CCDC168Q8NDH2 2452 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 UBR3Q6ZT12 1888 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 C5orf42Q9H799 3197 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 DNAH10Q8IVF4 4471 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 CDC42BPGQ6DT37 1551 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 DIP2BQ9P265 1576 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 DNAH5Q8TE73 4624 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 TMEM218A2RU14 115 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 IQCF6A8MYZ5 107 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 D6R8Y8 96 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 LEPROTL1O95214 131 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 MT1HL1P0DM35 61 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 PPP3R1P63098 170 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 ETDBQ3ZM63 59 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 NMSQ5H8A3 153 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 COX6B2Q6YFQ2 88 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 MUSTN1Q8IVN3 82 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 SVBPQ8N300 66 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 TMEM203Q969S6 136 aa-0.56□□□□□ -2.5
CDH1-211ENST00000567320 PMCHL2Q9BQD1 86 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms