RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 LINC00587B1AMM8 73 aa8.33□□□□□ -1.08
PALB2-205ENST00000567003 IGLV6-57P01721 117 aa8.33□□□□□ -1.08
PALB2-205ENST00000567003 SPANXB1Q9NS25 103 aaPredicted RBP8.33□□□□□ -1.08
PALB2-205ENST00000567003 LOC107984156A0A0G2JMH3 177 aa8.32□□□□□ -1.08
PALB2-205ENST00000567003 S100A7L2Q5SY68 101 aa8.32□□□□□ -1.08
PALB2-205ENST00000567003 ARL17AQ8IVW1 177 aa8.32□□□□□ -1.08
PALB2-205ENST00000567003 H0Y8G0 127 aa8.31□□□□□ -1.08
PALB2-205ENST00000567003 LIMD2Q9BT23 127 aa8.31□□□□□ -1.08
PALB2-205ENST00000567003 NPC2P61916 151 aa8.3□□□□□ -1.08
PALB2-205ENST00000567003 JOSD1Q15040 202 aaPredicted RBP8.3□□□□□ -1.08
PALB2-205ENST00000567003 RHEBQ15382 184 aa8.3□□□□□ -1.08
PALB2-205ENST00000567003 ZNF73O43830 326 aaPredicted RBP8.29□□□□□ -1.08
PALB2-205ENST00000567003 LEPROTO15243 131 aa8.28□□□□□ -1.08
PALB2-205ENST00000567003 SOSTDC1Q6X4U4 206 aa8.28□□□□□ -1.08
PALB2-205ENST00000567003 COMMD7Q86VX2 200 aa8.28□□□□□ -1.08
PALB2-205ENST00000567003 MIEN1Q9BRT3 115 aa8.28□□□□□ -1.08
PALB2-205ENST00000567003 IFITM2Q01629 132 aa8.27□□□□□ -1.09
PALB2-205ENST00000567003 C10orf91Q5T1B1 145 aa8.27□□□□□ -1.09
PALB2-205ENST00000567003 COX6B2Q6YFQ2 88 aa8.27□□□□□ -1.09
PALB2-205ENST00000567003 CHCHD1Q96BP2 118 aaKnown RBP8.27□□□□□ -1.09
PALB2-205ENST00000567003 NDUFC2O95298 119 aa8.26□□□□□ -1.09
PALB2-205ENST00000567003 H7C2G1 150 aa8.25□□□□□ -1.09
PALB2-205ENST00000567003 J3QQQ9 107 aa8.25□□□□□ -1.09
PALB2-205ENST00000567003 SPRR1BP22528 89 aa8.24□□□□□ -1.09
PALB2-205ENST00000567003 LINC00310P59036 64 aa8.23□□□□□ -1.09
PALB2-205ENST00000567003 ADAMTSL4-AS1Q5T5F5 129 aa8.22□□□□□ -1.09
PALB2-205ENST00000567003 PMCHL2Q9BQD1 86 aa8.22□□□□□ -1.09
PALB2-205ENST00000567003 C5orf52A6NGY3 159 aa8.21□□□□□ -1.1
PALB2-205ENST00000567003 LGALS3P17931 250 aaKnown RBP8.21□□□□□ -1.1
PALB2-205ENST00000567003 RPL37P61927 97 aaKnown RBP8.21□□□□□ -1.1
PALB2-205ENST00000567003 Q1RN00 199 aa8.21□□□□□ -1.1
PALB2-205ENST00000567003 LAMTOR3Q9UHA4 124 aa8.21□□□□□ -1.1
PALB2-205ENST00000567003 KRTAP9-7A8MTY7 169 aa8.2□□□□□ -1.1
PALB2-205ENST00000567003 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.2□□□□□ -1.1
PALB2-205ENST00000567003 HSBP1O75506 76 aa8.2□□□□□ -1.1
PALB2-205ENST00000567003 A0A0G2JQZ4 141 aa8.19□□□□□ -1.1
PALB2-205ENST00000567003 NMUP48645 174 aa8.19□□□□□ -1.1
PALB2-205ENST00000567003 HINT1P49773 126 aaPredicted RBP8.19□□□□□ -1.1
PALB2-205ENST00000567003 C1orf195Q5TG92 126 aa8.19□□□□□ -1.1
PALB2-205ENST00000567003 SLC25A34Q6PIV7 304 aa8.19□□□□□ -1.1
PALB2-205ENST00000567003 SSPOA2VEC9 5147 aa8.19□□□□□ -1.1
PALB2-205ENST00000567003 A0A0J9YXY3 114 aa8.18□□□□□ -1.1
PALB2-205ENST00000567003 DEFB105AQ8NG35 78 aa8.18□□□□□ -1.1
PALB2-205ENST00000567003 USH2AO75445 5202 aa8.18□□□□□ -1.1
PALB2-205ENST00000567003 PLNP26678 52 aa8.17□□□□□ -1.1
PALB2-205ENST00000567003 HERVK_113P61574 105 aa8.17□□□□□ -1.1
PALB2-205ENST00000567003 OR13C6PQ8NH95 151 aa8.17□□□□□ -1.1
PALB2-205ENST00000567003 DHRS4-AS1Q9P1J3 65 aa8.17□□□□□ -1.1
PALB2-205ENST00000567003 DPM2O94777 84 aa8.16□□□□□ -1.1
PALB2-205ENST00000567003 APOC3P02656 99 aa8.16□□□□□ -1.1
PALB2-205ENST00000567003 CD164Q04900 197 aa8.16□□□□□ -1.1
PALB2-205ENST00000567003 YPEL4Q96NS1 127 aa8.16□□□□□ -1.1
PALB2-205ENST00000567003 LEPROTL1O95214 131 aa8.15□□□□□ -1.1
PALB2-205ENST00000567003 PRO1933Q9H354 126 aa8.15□□□□□ -1.1
PALB2-205ENST00000567003 IGKCP01834 107 aa8.14□□□□□ -1.11
PALB2-205ENST00000567003 TAL2Q16559 108 aa8.14□□□□□ -1.11
PALB2-205ENST00000567003 FABP4P15090 132 aa8.13□□□□□ -1.11
PALB2-205ENST00000567003 COX7BP24311 80 aa8.13□□□□□ -1.11
PALB2-205ENST00000567003 SERF1AO75920 110 aa8.12□□□□□ -1.11
PALB2-205ENST00000567003 ELOF1P60002 83 aaKnown RBP8.12□□□□□ -1.11
PALB2-205ENST00000567003 Q5XG85 94 aa8.12□□□□□ -1.11
PALB2-205ENST00000567003 Q6Q795 121 aa8.12□□□□□ -1.11
PALB2-205ENST00000567003 LINC00308Q8TCZ7 52 aa8.12□□□□□ -1.11
PALB2-205ENST00000567003 SPANXCQ9NY87 97 aa8.12□□□□□ -1.11
PALB2-205ENST00000567003 CBY1Q9Y3M2 126 aa8.12□□□□□ -1.11
PALB2-205ENST00000567003 C6orf99Q4VX62 202 aa8.11□□□□□ -1.11
PALB2-205ENST00000567003 SMIM29Q86T20 159 aa8.11□□□□□ -1.11
PALB2-205ENST00000567003 LITAFQ99732 161 aa8.11□□□□□ -1.11
PALB2-205ENST00000567003 SNAPINO95295 136 aa8.1□□□□□ -1.11
PALB2-205ENST00000567003 TEX49A0A1B0GTD5 131 aa8.09□□□□□ -1.11
PALB2-205ENST00000567003 AKR1D1P51857 326 aa8.09□□□□□ -1.11
PALB2-205ENST00000567003 SPANXDQ9BXN6 97 aa8.09□□□□□ -1.11
PALB2-205ENST00000567003 C9orf118A6NHY6 69 aa8.08□□□□□ -1.12
PALB2-205ENST00000567003 SVBPQ8N300 66 aa8.08□□□□□ -1.12
PALB2-205ENST00000567003 E9PLD3 99 aa8.07□□□□□ -1.12
PALB2-205ENST00000567003 HSPB8Q9UJY1 196 aa8.07□□□□□ -1.12
PALB2-205ENST00000567003 TRGC2P03986 189 aa8.06□□□□□ -1.12
PALB2-205ENST00000567003 NDUFA5Q16718 116 aa8.04□□□□□ -1.12
PALB2-205ENST00000567003 FCGBPQ9Y6R7 5405 aaPredicted RBP8.03□□□□□ -1.12
PALB2-205ENST00000567003 IGLV5-48A0A075B6I7 105 aa8.02□□□□□ -1.13
PALB2-205ENST00000567003 TIMM17BO60830 172 aa8.02□□□□□ -1.13
PALB2-205ENST00000567003 KRTAP9-8Q9BYQ0 159 aa8.02□□□□□ -1.13
PALB2-205ENST00000567003 TTTY13Q9BZ97 58 aa8.02□□□□□ -1.13
PALB2-205ENST00000567003 TCL1BO95988 128 aa8□□□□□ -1.13
PALB2-205ENST00000567003 ZNF815PA8K554 130 aa7.99□□□□□ -1.13
PALB2-205ENST00000567003 TRBV7-6A0A0J9YX20 115 aa7.98□□□□□ -1.13
PALB2-205ENST00000567003 A0A1B0GWB2 263 aa7.98□□□□□ -1.13
PALB2-205ENST00000567003 PCP2Q8IVA1 136 aa7.98□□□□□ -1.13
PALB2-205ENST00000567003 LINC00518Q8N0U6 118 aa7.98□□□□□ -1.13
PALB2-205ENST00000567003 OBSCN-AS1Q96MR7 158 aa7.98□□□□□ -1.13
PALB2-205ENST00000567003 CFC1P0CG37 223 aa7.97□□□□□ -1.13
PALB2-205ENST00000567003 ATP11AUNQ6ZP68 121 aa7.96□□□□□ -1.14
PALB2-205ENST00000567003 KRTAP19-4Q3LI73 84 aa7.95□□□□□ -1.14
PALB2-205ENST00000567003 SYS1-DBNDD2H3BUS1 97 aa7.94□□□□□ -1.14
PALB2-205ENST00000567003 Q75L30 129 aa7.94□□□□□ -1.14
PALB2-205ENST00000567003 KRTAP4-8Q9BYQ9 185 aa7.94□□□□□ -1.14
PALB2-205ENST00000567003 A6NDN8 102 aa7.93□□□□□ -1.14
PALB2-205ENST00000567003 LINC01545Q5VT33 79 aa7.9□□□□□ -1.14
PALB2-205ENST00000567003 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.14
PALB2-205ENST00000567003 TRBV7-7A0A0K0K1E9 115 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms