RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 HIST1H2BNQ99877 126 aa5.92□□□□□ -1.46
GTF3C1-206ENST00000566779 HIST1H2BMQ99879 126 aa5.92□□□□□ -1.46
GTF3C1-206ENST00000566779 RNF213Q63HN8 5207 aa5.91□□□□□ -1.46
GTF3C1-206ENST00000566779 DDTP30046 118 aa5.91□□□□□ -1.46
GTF3C1-206ENST00000566779 NMUP48645 174 aa5.91□□□□□ -1.46
GTF3C1-206ENST00000566779 S100A7L2Q5SY68 101 aa5.91□□□□□ -1.46
GTF3C1-206ENST00000566779 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
GTF3C1-206ENST00000566779 ZNF706Q9Y5V0 76 aaPredicted RBP5.91□□□□□ -1.46
GTF3C1-206ENST00000566779 SYS1-DBNDD2H3BUS1 97 aa5.9□□□□□ -1.46
GTF3C1-206ENST00000566779 SPRR4Q96PI1 79 aa5.9□□□□□ -1.46
GTF3C1-206ENST00000566779 LPAP08519 4548 aa5.89□□□□□ -1.47
GTF3C1-206ENST00000566779 A0A0J9YXY3 114 aa5.89□□□□□ -1.47
GTF3C1-206ENST00000566779 KRTDAPP60985 99 aa5.89□□□□□ -1.47
GTF3C1-206ENST00000566779 SMCR5Q8TEV8 140 aa5.89□□□□□ -1.47
GTF3C1-206ENST00000566779 KCNQ1DNQ9H478 68 aa5.89□□□□□ -1.47
GTF3C1-206ENST00000566779 SPANXB1Q9NS25 103 aaPredicted RBP5.89□□□□□ -1.47
GTF3C1-206ENST00000566779 E9PLD3 99 aa5.88□□□□□ -1.47
GTF3C1-206ENST00000566779 GAGE2AQ6NT46 116 aa5.88□□□□□ -1.47
GTF3C1-206ENST00000566779 LINC00337Q8N6G1 96 aa5.88□□□□□ -1.47
GTF3C1-206ENST00000566779 IGLV9-49A0A0B4J1Y8 123 aa5.87□□□□□ -1.47
GTF3C1-206ENST00000566779 ZNF815PA8K554 130 aa5.87□□□□□ -1.47
GTF3C1-206ENST00000566779 ADAMTSL4-AS1Q5T5F5 129 aa5.87□□□□□ -1.47
GTF3C1-206ENST00000566779 TTTY13Q9BZ97 58 aa5.87□□□□□ -1.47
GTF3C1-206ENST00000566779 TRAV23DV6A0A075B6W5 121 aa5.86□□□□□ -1.47
GTF3C1-206ENST00000566779 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
GTF3C1-206ENST00000566779 SPRR1AP35321 89 aa5.86□□□□□ -1.47
GTF3C1-206ENST00000566779 SOSTDC1Q6X4U4 206 aa5.86□□□□□ -1.47
GTF3C1-206ENST00000566779 Q8NBF4 154 aa5.86□□□□□ -1.47
GTF3C1-206ENST00000566779 OR13C6PQ8NH95 151 aa5.86□□□□□ -1.47
GTF3C1-206ENST00000566779 MPLKIPQ8TAP9 179 aa5.86□□□□□ -1.47
GTF3C1-206ENST00000566779 TRBV10-2A0A0K0K1G8 114 aa5.85□□□□□ -1.47
GTF3C1-206ENST00000566779 ERC2-IT1O76042 136 aa5.85□□□□□ -1.47
GTF3C1-206ENST00000566779 C3orf79P0CE67 100 aa5.85□□□□□ -1.47
GTF3C1-206ENST00000566779 MOBPQ13875 183 aa5.85□□□□□ -1.47
GTF3C1-206ENST00000566779 LINC01545Q5VT33 79 aa5.85□□□□□ -1.47
GTF3C1-206ENST00000566779 PET117Q6UWS5 81 aa5.85□□□□□ -1.47
GTF3C1-206ENST00000566779 Q6ZRX8 168 aa5.84□□□□□ -1.47
GTF3C1-206ENST00000566779 ATOH7Q8N100 152 aa5.84□□□□□ -1.47
GTF3C1-206ENST00000566779 C20orf202A1L168 122 aa5.83□□□□□ -1.48
GTF3C1-206ENST00000566779 KRTAP4-16G5E9R7 235 aaPredicted RBP5.83□□□□□ -1.48
GTF3C1-206ENST00000566779 ZNF73O43830 326 aaPredicted RBP5.83□□□□□ -1.48
GTF3C1-206ENST00000566779 NDUFC2O95298 119 aa5.83□□□□□ -1.48
GTF3C1-206ENST00000566779 C9orf153Q5TBE3 101 aa5.83□□□□□ -1.48
GTF3C1-206ENST00000566779 SCGB1D4Q6XE38 83 aa5.83□□□□□ -1.48
GTF3C1-206ENST00000566779 LINC00308Q8TCZ7 52 aa5.83□□□□□ -1.48
GTF3C1-206ENST00000566779 Q9BRP9 147 aa5.83□□□□□ -1.48
GTF3C1-206ENST00000566779 PAM16Q9Y3D7 125 aa5.83□□□□□ -1.48
GTF3C1-206ENST00000566779 IGLV7-46A0A075B6I9 117 aa5.82□□□□□ -1.48
GTF3C1-206ENST00000566779 LOC107984156A0A0G2JMH3 177 aa5.82□□□□□ -1.48
GTF3C1-206ENST00000566779 IGLV6-57P01721 117 aa5.82□□□□□ -1.48
GTF3C1-206ENST00000566779 ARL17AQ8IVW1 177 aa5.82□□□□□ -1.48
GTF3C1-206ENST00000566779 HINT1P49773 126 aaPredicted RBP5.81□□□□□ -1.48
GTF3C1-206ENST00000566779 JOSD1Q15040 202 aaPredicted RBP5.81□□□□□ -1.48
GTF3C1-206ENST00000566779 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
GTF3C1-206ENST00000566779 SPANXCQ9NY87 97 aa5.81□□□□□ -1.48
GTF3C1-206ENST00000566779 SPAG11AQ6PDA7 123 aa5.8□□□□□ -1.48
GTF3C1-206ENST00000566779 ST20-AS1Q8NBB2 130 aa5.8□□□□□ -1.48
GTF3C1-206ENST00000566779 LITAFQ99732 161 aa5.8□□□□□ -1.48
GTF3C1-206ENST00000566779 TIMM17BO60830 172 aa5.79□□□□□ -1.48
GTF3C1-206ENST00000566779 LINC00483Q53H64 154 aa5.79□□□□□ -1.48
GTF3C1-206ENST00000566779 COA6Q5JTJ3 125 aaKnown RBP5.78□□□□□ -1.48
GTF3C1-206ENST00000566779 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
GTF3C1-206ENST00000566779 CBY1Q9Y3M2 126 aa5.78□□□□□ -1.48
GTF3C1-206ENST00000566779 S100A2P29034 98 aa5.77□□□□□ -1.49
GTF3C1-206ENST00000566779 SPANXDQ9BXN6 97 aa5.77□□□□□ -1.49
GTF3C1-206ENST00000566779 COX7BP24311 80 aa5.76□□□□□ -1.49
GTF3C1-206ENST00000566779 C6orf99Q4VX62 202 aa5.76□□□□□ -1.49
GTF3C1-206ENST00000566779 PCP2Q8IVA1 136 aa5.76□□□□□ -1.49
GTF3C1-206ENST00000566779 A6NDN8 102 aa5.75□□□□□ -1.49
GTF3C1-206ENST00000566779 SEC61BP60468 96 aaKnown RBP5.75□□□□□ -1.49
GTF3C1-206ENST00000566779 UBE2V1Q13404 147 aa5.75□□□□□ -1.49
GTF3C1-206ENST00000566779 HRCT1Q6UXD1 115 aa5.75□□□□□ -1.49
GTF3C1-206ENST00000566779 DEFB105AQ8NG35 78 aa5.75□□□□□ -1.49
GTF3C1-206ENST00000566779 SPINK1P00995 79 aa5.74□□□□□ -1.49
GTF3C1-206ENST00000566779 SNRPEP62304 92 aaKnown RBP5.74□□□□□ -1.49
GTF3C1-206ENST00000566779 TPRXLQ17RH7 258 aa5.74□□□□□ -1.49
GTF3C1-206ENST00000566779 LINC00518Q8N0U6 118 aa5.74□□□□□ -1.49
GTF3C1-206ENST00000566779 COPS9Q8WXC6 57 aa5.74□□□□□ -1.49
GTF3C1-206ENST00000566779 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
GTF3C1-206ENST00000566779 A0A0U1RQV1 116 aa5.73□□□□□ -1.49
GTF3C1-206ENST00000566779 Q1RN00 199 aa5.73□□□□□ -1.49
GTF3C1-206ENST00000566779 FP248Q71RG6 208 aaPredicted RBP5.73□□□□□ -1.49
GTF3C1-206ENST00000566779 MUSTN1Q8IVN3 82 aa5.73□□□□□ -1.49
GTF3C1-206ENST00000566779 DHRS4-AS1Q9P1J3 65 aa5.73□□□□□ -1.49
GTF3C1-206ENST00000566779 HSBP1L1C9JCN9 74 aa5.72□□□□□ -1.49
GTF3C1-206ENST00000566779 S100A6P06703 90 aa5.72□□□□□ -1.49
GTF3C1-206ENST00000566779 TAL2Q16559 108 aa5.72□□□□□ -1.49
GTF3C1-206ENST00000566779 SSBP3-AS1Q7Z2R9 100 aa5.72□□□□□ -1.49
GTF3C1-206ENST00000566779 HIST3H2BBQ8N257 126 aa5.72□□□□□ -1.49
GTF3C1-206ENST00000566779 KRTAP9-9Q9BYP9 154 aa5.72□□□□□ -1.49
GTF3C1-206ENST00000566779 ELOF1P60002 83 aaKnown RBP5.71□□□□□ -1.5
GTF3C1-206ENST00000566779 CTAG1AP78358 180 aa5.71□□□□□ -1.5
GTF3C1-206ENST00000566779 HIST1H2BLQ99880 126 aa5.71□□□□□ -1.5
GTF3C1-206ENST00000566779 LAMTOR3Q9UHA4 124 aa5.71□□□□□ -1.5
GTF3C1-206ENST00000566779 SLC25A20O43772 301 aa5.7□□□□□ -1.5
GTF3C1-206ENST00000566779 IFITM1P13164 125 aa5.7□□□□□ -1.5
GTF3C1-206ENST00000566779 S100A1P23297 94 aa5.7□□□□□ -1.5
GTF3C1-206ENST00000566779 AKR1D1P51857 326 aa5.7□□□□□ -1.5
GTF3C1-206ENST00000566779 SLC25A34Q6PIV7 304 aa5.7□□□□□ -1.5
GTF3C1-206ENST00000566779 Q8N377 158 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms