RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 SPATA45Q537H7 98 aa15.71■□□□□ 0.11
NME3-209ENST00000566600 OR13C6PQ8NH95 151 aa15.71■□□□□ 0.11
NME3-209ENST00000566600 PAM16Q9Y3D7 125 aa15.71■□□□□ 0.11
NME3-209ENST00000566600 TRAV23DV6A0A075B6W5 121 aa15.7■□□□□ 0.1
NME3-209ENST00000566600 KRTAP1-4P0C5Y4 121 aa15.7■□□□□ 0.1
NME3-209ENST00000566600 KRTAP4-16G5E9R7 235 aaPredicted RBP15.69■□□□□ 0.1
NME3-209ENST00000566600 KRTAP10-8P60410 259 aa15.68■□□□□ 0.1
NME3-209ENST00000566600 HIGD2AQ9BW72 106 aa15.67■□□□□ 0.1
NME3-209ENST00000566600 PYY3Q5JQD4 70 aa15.65■□□□□ 0.1
NME3-209ENST00000566600 ZNF73O43830 326 aaPredicted RBP15.64■□□□□ 0.09
NME3-209ENST00000566600 C14orf144Q96I85 54 aa15.64■□□□□ 0.09
NME3-209ENST00000566600 B5MCH6 92 aa15.63■□□□□ 0.09
NME3-209ENST00000566600 PRR26Q8N8Z3 221 aa15.63■□□□□ 0.09
NME3-209ENST00000566600 RPL13AP40429 203 aaKnown RBP15.62■□□□□ 0.09
NME3-209ENST00000566600 HINT1P49773 126 aaPredicted RBP15.62■□□□□ 0.09
NME3-209ENST00000566600 SLC25A34Q6PIV7 304 aa15.62■□□□□ 0.09
NME3-209ENST00000566600 Q6ZRX8 168 aa15.6■□□□□ 0.09
NME3-209ENST00000566600 HIST1H4GQ99525 98 aa15.6■□□□□ 0.09
NME3-209ENST00000566600 TRAV13-2A0A0B4J235 113 aa15.58■□□□□ 0.08
NME3-209ENST00000566600 A6NDN8 102 aa15.58■□□□□ 0.08
NME3-209ENST00000566600 HIGD1BQ9P298 99 aa15.58■□□□□ 0.08
NME3-209ENST00000566600 ZNF706Q9Y5V0 76 aaPredicted RBP15.58■□□□□ 0.08
NME3-209ENST00000566600 HERC1Q15751 4861 aa15.57■□□□□ 0.08
NME3-209ENST00000566600 FAM229BQ4G0N7 80 aa15.57■□□□□ 0.08
NME3-209ENST00000566600 CRYGAP11844 174 aa15.56■□□□□ 0.08
NME3-209ENST00000566600 SMCR5Q8TEV8 140 aa15.56■□□□□ 0.08
NME3-209ENST00000566600 A4D1N5 150 aa15.54■□□□□ 0.08
NME3-209ENST00000566600 TNXBP22105 4242 aa15.54■□□□□ 0.08
NME3-209ENST00000566600 SPRR4Q96PI1 79 aa15.52■□□□□ 0.08
NME3-209ENST00000566600 Q9BRP9 147 aa15.51■□□□□ 0.07
NME3-209ENST00000566600 ANAPC11Q9NYG5 84 aa15.51■□□□□ 0.07
NME3-209ENST00000566600 A0A087X002 238 aa15.49■□□□□ 0.07
NME3-209ENST00000566600 C6orf99Q4VX62 202 aa15.49■□□□□ 0.07
NME3-209ENST00000566600 TRBV7-6A0A0J9YX20 115 aa15.48■□□□□ 0.07
NME3-209ENST00000566600 C2orf91Q6ZV80 131 aa15.48■□□□□ 0.07
NME3-209ENST00000566600 COX7BP24311 80 aa15.47■□□□□ 0.07
NME3-209ENST00000566600 ELOF1P60002 83 aaKnown RBP15.46■□□□□ 0.07
NME3-209ENST00000566600 TAL2Q16559 108 aa15.46■□□□□ 0.07
NME3-209ENST00000566600 DHRS4-AS1Q9P1J3 65 aa15.46■□□□□ 0.07
NME3-209ENST00000566600 ERC2-IT1O76042 136 aa15.45■□□□□ 0.06
NME3-209ENST00000566600 TYMSOSQ8TAI1 123 aa15.45■□□□□ 0.06
NME3-209ENST00000566600 A0A1B0GWB2 263 aa15.42■□□□□ 0.06
NME3-209ENST00000566600 SMIM11BQ8TCY0 68 aa15.42■□□□□ 0.06
NME3-209ENST00000566600 KRTAP13-2Q52LG2 175 aa15.41■□□□□ 0.06
NME3-209ENST00000566600 LINC00483Q53H64 154 aa15.4■□□□□ 0.06
NME3-209ENST00000566600 GAGE2AQ6NT46 116 aa15.4■□□□□ 0.06
NME3-209ENST00000566600 C12orf57Q99622 126 aa15.4■□□□□ 0.06
NME3-209ENST00000566600 CEND1Q8N111 149 aa15.38■□□□□ 0.05
NME3-209ENST00000566600 UQCR10Q9UDW1 63 aa15.38■□□□□ 0.05
NME3-209ENST00000566600 VAMP3Q15836 100 aa15.37■□□□□ 0.05
NME3-209ENST00000566600 TMEM238LA0A1B0GVL6 79 aa15.36■□□□□ 0.05
NME3-209ENST00000566600 A6NJY4 79 aa15.36■□□□□ 0.05
NME3-209ENST00000566600 RAB37Q96AX2 223 aa15.35■□□□□ 0.05
NME3-209ENST00000566600 CFC1BP0CG36 223 aa15.34■□□□□ 0.05
NME3-209ENST00000566600 CFC1P0CG37 223 aa15.34■□□□□ 0.05
NME3-209ENST00000566600 NHP2Q9NX24 153 aaKnown RBP15.33■□□□□ 0.04
NME3-209ENST00000566600 A0A0B4J2C4 111 aa15.32■□□□□ 0.04
NME3-209ENST00000566600 SMIM6P0DI80 62 aa15.32■□□□□ 0.04
NME3-209ENST00000566600 HSD52Q0P140 79 aa15.32■□□□□ 0.04
NME3-209ENST00000566600 C3orf22Q8N5N4 141 aa15.32■□□□□ 0.04
NME3-209ENST00000566600 ST20-AS1Q8NBB2 130 aa15.31■□□□□ 0.04
NME3-209ENST00000566600 LINC00304Q8N9R0 145 aa15.28■□□□□ 0.04
NME3-209ENST00000566600 SLC25A20O43772 301 aa15.27■□□□□ 0.04
NME3-209ENST00000566600 FXYD2P54710 66 aa15.26■□□□□ 0.03
NME3-209ENST00000566600 BVES-AS1Q5T3Y7 98 aa15.26■□□□□ 0.03
NME3-209ENST00000566600 H7C2G1 150 aa15.25■□□□□ 0.03
NME3-209ENST00000566600 SPRR1BP22528 89 aa15.25■□□□□ 0.03
NME3-209ENST00000566600 IGLV9-49A0A0B4J1Y8 123 aa15.23■□□□□ 0.03
NME3-209ENST00000566600 PRO1854Q9UHT4 67 aa15.23■□□□□ 0.03
NME3-209ENST00000566600 CTAG1AP78358 180 aa15.22■□□□□ 0.03
NME3-209ENST00000566600 LINC00575Q6W349 94 aa15.22■□□□□ 0.03
NME3-209ENST00000566600 SPAG11AQ6PDA7 123 aa15.21■□□□□ 0.03
NME3-209ENST00000566600 SSBP3-AS1Q7Z2R9 100 aa15.21■□□□□ 0.03
NME3-209ENST00000566600 TEX49A0A1B0GTD5 131 aa15.2■□□□□ 0.02
NME3-209ENST00000566600 LOC105371267A0A1B0GV96 52 aa15.2■□□□□ 0.02
NME3-209ENST00000566600 TSPAN13O95857 204 aa15.2■□□□□ 0.02
NME3-209ENST00000566600 PRO1933Q9H354 126 aa15.2■□□□□ 0.02
NME3-209ENST00000566600 MOBPQ13875 183 aa15.19■□□□□ 0.02
NME3-209ENST00000566600 Q1RN00 199 aa15.19■□□□□ 0.02
NME3-209ENST00000566600 DEFB105AQ8NG35 78 aa15.19■□□□□ 0.02
NME3-209ENST00000566600 LAMTOR3Q9UHA4 124 aa15.19■□□□□ 0.02
NME3-209ENST00000566600 C4orf48Q5BLP8 95 aa15.18■□□□□ 0.02
NME3-209ENST00000566600 Q8NBF4 154 aa15.18■□□□□ 0.02
NME3-209ENST00000566600 IGLV5-48A0A075B6I7 105 aa15.17■□□□□ 0.02
NME3-209ENST00000566600 hADV29S1A0JD25 119 aa15.17■□□□□ 0.02
NME3-209ENST00000566600 C9orf153Q5TBE3 101 aa15.16■□□□□ 0.02
NME3-209ENST00000566600 H0YGX0 51 aa15.14■□□□□ 0.01
NME3-209ENST00000566600 HMCN2Q8NDA2 5059 aa15.13■□□□□ 0.01
NME3-209ENST00000566600 SNCGO76070 127 aa15.12■□□□□ 0.01
NME3-209ENST00000566600 LINC01547P58512 204 aaPredicted RBP15.12■□□□□ 0.01
NME3-209ENST00000566600 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.09■□□□□ 0.01
NME3-209ENST00000566600 Q6ZQY7 126 aa15.09■□□□□ 0.01
NME3-209ENST00000566600 SPINK1P00995 79 aa15.08■□□□□ 0
NME3-209ENST00000566600 TSTD3H0UI37 97 aa15.07■□□□□ 0
NME3-209ENST00000566600 K7ERJ3 54 aa15.07■□□□□ 0
NME3-209ENST00000566600 SMIM29Q86T20 159 aa15.06■□□□□ 0
NME3-209ENST00000566600 Q8N377 158 aa15.06■□□□□ 0
NME3-209ENST00000566600 M0R143 59 aa15.04■□□□□ -0
NME3-209ENST00000566600 PRR4Q16378 134 aa15.03■□□□□ -0
NME3-209ENST00000566600 TRIAP1O43715 76 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms