RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 EPM2AB3EWF7 344 aa11.8□□□□□ -0.52
COMMD4-213ENST00000565834 PHF5AQ7RTV0 110 aaKnown RBP11.8□□□□□ -0.52
COMMD4-213ENST00000565834 J3QR89 54 aa11.79□□□□□ -0.52
COMMD4-213ENST00000565834 KCNQ1DNQ9H478 68 aa11.79□□□□□ -0.52
COMMD4-213ENST00000565834 PLAC8Q9NZF1 115 aa11.79□□□□□ -0.52
COMMD4-213ENST00000565834 C6orf99Q4VX62 202 aa11.78□□□□□ -0.52
COMMD4-213ENST00000565834 FAM30AQ9NZY2 134 aa11.78□□□□□ -0.52
COMMD4-213ENST00000565834 ZNF73O43830 326 aaPredicted RBP11.78□□□□□ -0.52
COMMD4-213ENST00000565834 Q6ZSA8 131 aa11.78□□□□□ -0.52
COMMD4-213ENST00000565834 DIRC1Q969H9 104 aa11.78□□□□□ -0.52
COMMD4-213ENST00000565834 PRYO14603 147 aa11.77□□□□□ -0.53
COMMD4-213ENST00000565834 UBE2BP63146 152 aa11.77□□□□□ -0.53
COMMD4-213ENST00000565834 VPS25Q9BRG1 176 aa11.77□□□□□ -0.53
COMMD4-213ENST00000565834 PKHD1P08F94 4074 aa11.76□□□□□ -0.53
COMMD4-213ENST00000565834 DNAH8Q96JB1 4490 aa11.76□□□□□ -0.53
COMMD4-213ENST00000565834 H0YGX0 51 aa11.74□□□□□ -0.53
COMMD4-213ENST00000565834 CLEC2BQ92478 149 aa11.74□□□□□ -0.53
COMMD4-213ENST00000565834 H3BMG7 143 aa11.73□□□□□ -0.53
COMMD4-213ENST00000565834 TCL1BO95988 128 aa11.72□□□□□ -0.53
COMMD4-213ENST00000565834 CIRBP-AS1Q8TBR5 109 aa11.72□□□□□ -0.53
COMMD4-213ENST00000565834 TRBV7-6A0A0J9YX20 115 aa11.71□□□□□ -0.53
COMMD4-213ENST00000565834 REG3GQ6UW15 175 aa11.71□□□□□ -0.53
COMMD4-213ENST00000565834 SCXQ7RTU7 201 aa11.71□□□□□ -0.53
COMMD4-213ENST00000565834 COX7BP24311 80 aa11.7□□□□□ -0.54
COMMD4-213ENST00000565834 SPRR1AP35321 89 aa11.7□□□□□ -0.54
COMMD4-213ENST00000565834 KRTAP11-1Q8IUC1 163 aa11.7□□□□□ -0.54
COMMD4-213ENST00000565834 ATXN8Q156A1 80 aa11.69□□□□□ -0.54
COMMD4-213ENST00000565834 ETDCA0A1B0GVM5 59 aa11.68□□□□□ -0.54
COMMD4-213ENST00000565834 LST1O00453 97 aa11.68□□□□□ -0.54
COMMD4-213ENST00000565834 ELOF1P60002 83 aaKnown RBP11.68□□□□□ -0.54
COMMD4-213ENST00000565834 FAM218AQ96MZ4 157 aa11.68□□□□□ -0.54
COMMD4-213ENST00000565834 PRO0461Q9UI25 63 aa11.68□□□□□ -0.54
COMMD4-213ENST00000565834 KRTAP4-16G5E9R7 235 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-213ENST00000565834 HAMPP81172 84 aa11.66□□□□□ -0.54
COMMD4-213ENST00000565834 LRP1BQ9NZR2 4599 aa11.66□□□□□ -0.54
COMMD4-213ENST00000565834 DYNC1H1Q14204 4646 aaKnown RBP11.65□□□□□ -0.54
COMMD4-213ENST00000565834 B5MCH6 92 aa11.65□□□□□ -0.55
COMMD4-213ENST00000565834 LINC00575Q6W349 94 aa11.65□□□□□ -0.55
COMMD4-213ENST00000565834 LINC00528Q8N1L1 170 aa11.65□□□□□ -0.55
COMMD4-213ENST00000565834 Q6ZRX8 168 aa11.64□□□□□ -0.55
COMMD4-213ENST00000565834 SNCGO76070 127 aa11.63□□□□□ -0.55
COMMD4-213ENST00000565834 TRACP01848 142 aa11.63□□□□□ -0.55
COMMD4-213ENST00000565834 PCP4P48539 62 aa11.63□□□□□ -0.55
COMMD4-213ENST00000565834 A0A1B0GX51 115 aa11.62□□□□□ -0.55
COMMD4-213ENST00000565834 SLC25A20O43772 301 aa11.62□□□□□ -0.55
COMMD4-213ENST00000565834 FAM19A1Q7Z5A9 133 aa11.62□□□□□ -0.55
COMMD4-213ENST00000565834 ETDBQ3ZM63 59 aa11.62□□□□□ -0.55
COMMD4-213ENST00000565834 hADV29S1A0JD25 119 aa11.61□□□□□ -0.55
COMMD4-213ENST00000565834 BCE1O60756 84 aa11.61□□□□□ -0.55
COMMD4-213ENST00000565834 PSORS1C2Q9UIG4 136 aa11.61□□□□□ -0.55
COMMD4-213ENST00000565834 EPPK1P58107 5090 aaKnown RBP11.61□□□□□ -0.55
COMMD4-213ENST00000565834 DNAL4O96015 105 aa11.6□□□□□ -0.55
COMMD4-213ENST00000565834 INAFM2P0DMQ5 153 aa11.59□□□□□ -0.55
COMMD4-213ENST00000565834 PRLHP81277 87 aa11.59□□□□□ -0.55
COMMD4-213ENST00000565834 LINC01600Q96MT4 127 aa11.59□□□□□ -0.55
COMMD4-213ENST00000565834 DHRS4-AS1Q9P1J3 65 aa11.59□□□□□ -0.55
COMMD4-213ENST00000565834 C9JAW5 83 aa11.58□□□□□ -0.56
COMMD4-213ENST00000565834 UBE2AP49459 152 aa11.58□□□□□ -0.56
COMMD4-213ENST00000565834 TEN1Q86WV5 123 aa11.58□□□□□ -0.56
COMMD4-213ENST00000565834 Q9BRP9 147 aa11.58□□□□□ -0.56
COMMD4-213ENST00000565834 PPDPFLQ8WWR9 84 aa11.57□□□□□ -0.56
COMMD4-213ENST00000565834 H0Y9J4 135 aa11.56□□□□□ -0.56
COMMD4-213ENST00000565834 C1orf137Q5JT78 98 aa11.56□□□□□ -0.56
COMMD4-213ENST00000565834 MTURNQ8N3F0 131 aa11.56□□□□□ -0.56
COMMD4-213ENST00000565834 XGP55808 180 aa11.55□□□□□ -0.56
COMMD4-213ENST00000565834 SMCPP49901 116 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-213ENST00000565834 Q6ZQY7 126 aa11.53□□□□□ -0.56
COMMD4-213ENST00000565834 SMCR5Q8TEV8 140 aa11.53□□□□□ -0.56
COMMD4-213ENST00000565834 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.52□□□□□ -0.56
COMMD4-213ENST00000565834 KRTAP13-1Q8IUC0 172 aa11.52□□□□□ -0.56
COMMD4-213ENST00000565834 HIGD2AQ9BW72 106 aa11.52□□□□□ -0.56
COMMD4-213ENST00000565834 ORMDL1Q9P0S3 153 aa11.52□□□□□ -0.57
COMMD4-213ENST00000565834 SCGB1A1P11684 91 aa11.51□□□□□ -0.57
COMMD4-213ENST00000565834 SIGMAR1Q99720 223 aa11.51□□□□□ -0.57
COMMD4-213ENST00000565834 APOBP04114 4563 aaKnown RBP11.51□□□□□ -0.57
COMMD4-213ENST00000565834 ERC2-IT1O76042 136 aa11.49□□□□□ -0.57
COMMD4-213ENST00000565834 BAALC-AS2P0C853 105 aa11.49□□□□□ -0.57
COMMD4-213ENST00000565834 ANKRD29Q8N6D5 301 aa11.49□□□□□ -0.57
COMMD4-213ENST00000565834 H3BT86 120 aa11.49□□□□□ -0.57
COMMD4-213ENST00000565834 IGLV7-43P04211 117 aa11.48□□□□□ -0.57
COMMD4-213ENST00000565834 ZNF861PO60384 105 aa11.46□□□□□ -0.57
COMMD4-213ENST00000565834 GHRHP01286 108 aa11.46□□□□□ -0.58
COMMD4-213ENST00000565834 SMR3BP02814 79 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-213ENST00000565834 ST20-AS1Q8NBB2 130 aa11.45□□□□□ -0.58
COMMD4-213ENST00000565834 H3BQ85 93 aa11.44□□□□□ -0.58
COMMD4-213ENST00000565834 TMEM256-PLSCR3K7ERE1 68 aa11.44□□□□□ -0.58
COMMD4-213ENST00000565834 DEFB105AQ8NG35 78 aa11.43□□□□□ -0.58
COMMD4-213ENST00000565834 SRRM2Q9UQ35 2752 aaKnown RBP11.43□□□□□ -0.58
COMMD4-213ENST00000565834 CDK2AP2O75956 126 aa11.43□□□□□ -0.58
COMMD4-213ENST00000565834 RPL37AP61513 92 aaKnown RBP11.43□□□□□ -0.58
COMMD4-213ENST00000565834 BIRC6Q9NR09 4857 aa11.41□□□□□ -0.58
COMMD4-213ENST00000565834 VPS13BQ7Z7G8 4022 aa11.41□□□□□ -0.58
COMMD4-213ENST00000565834 IGLV5-48A0A075B6I7 105 aa11.4□□□□□ -0.58
COMMD4-213ENST00000565834 LINC01547P58512 204 aaPredicted RBP11.4□□□□□ -0.58
COMMD4-213ENST00000565834 Q8N377 158 aa11.39□□□□□ -0.59
COMMD4-213ENST00000565834 TEX49A0A1B0GTD5 131 aa11.37□□□□□ -0.59
COMMD4-213ENST00000565834 C21orf62-AS1Q17RA5 79 aa11.36□□□□□ -0.59
COMMD4-213ENST00000565834 ZNF706Q9Y5V0 76 aaPredicted RBP11.36□□□□□ -0.59
COMMD4-213ENST00000565834 GAGE2AQ6NT46 116 aa11.36□□□□□ -0.59
COMMD4-213ENST00000565834 LAMTOR3Q9UHA4 124 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 213.2 ms