RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 UBE2BP63146 152 aa6.48□□□□□ -1.37
CAPN3-215ENST00000565559 RPL24P83731 157 aaKnown RBP6.48□□□□□ -1.37
CAPN3-215ENST00000565559 MRPL55Q7Z7F7 128 aaKnown RBP6.48□□□□□ -1.37
CAPN3-215ENST00000565559 MIR7-3HGQ8N6C7 128 aa6.48□□□□□ -1.37
CAPN3-215ENST00000565559 IGKV2D-26A0A0A0MRZ7 120 aa6.47□□□□□ -1.37
CAPN3-215ENST00000565559 LOC107984156A0A0G2JMH3 177 aa6.47□□□□□ -1.37
CAPN3-215ENST00000565559 VPREB1P12018 145 aa6.47□□□□□ -1.37
CAPN3-215ENST00000565559 KRTAP11-1Q8IUC1 163 aa6.47□□□□□ -1.37
CAPN3-215ENST00000565559 ARL17AQ8IVW1 177 aa6.47□□□□□ -1.37
CAPN3-215ENST00000565559 NKAPP1Q8N9T2 125 aa6.47□□□□□ -1.37
CAPN3-215ENST00000565559 A0A0J9YXY3 114 aa6.46□□□□□ -1.38
CAPN3-215ENST00000565559 LINC00167Q96N53 147 aa6.46□□□□□ -1.38
CAPN3-215ENST00000565559 ZNF861PO60384 105 aa6.45□□□□□ -1.38
CAPN3-215ENST00000565559 TIMM17BO60830 172 aa6.45□□□□□ -1.38
CAPN3-215ENST00000565559 ASB16-AS1Q495Z4 193 aa6.45□□□□□ -1.38
CAPN3-215ENST00000565559 ATOH7Q8N100 152 aa6.45□□□□□ -1.38
CAPN3-215ENST00000565559 LINC00337Q8N6G1 96 aa6.45□□□□□ -1.38
CAPN3-215ENST00000565559 PPDPFQ9H3Y8 114 aa6.45□□□□□ -1.38
CAPN3-215ENST00000565559 A0A087X002 238 aa6.44□□□□□ -1.38
CAPN3-215ENST00000565559 ZNF815PA8K554 130 aa6.44□□□□□ -1.38
CAPN3-215ENST00000565559 BOD1L2Q8IYS8 172 aa6.44□□□□□ -1.38
CAPN3-215ENST00000565559 HSBP1L1C9JCN9 74 aa6.43□□□□□ -1.38
CAPN3-215ENST00000565559 M0R378 163 aa6.43□□□□□ -1.38
CAPN3-215ENST00000565559 ADAMTSL4-AS1Q5T5F5 129 aa6.43□□□□□ -1.38
CAPN3-215ENST00000565559 DAND5Q8N907 189 aa6.43□□□□□ -1.38
CAPN3-215ENST00000565559 Q8NDZ9 215 aa6.43□□□□□ -1.38
CAPN3-215ENST00000565559 GAGE10A6NGK3 116 aa6.42□□□□□ -1.38
CAPN3-215ENST00000565559 RPL37AP8A6NKH3 93 aa6.42□□□□□ -1.38
CAPN3-215ENST00000565559 SCGB1D1O95968 90 aa6.42□□□□□ -1.38
CAPN3-215ENST00000565559 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
CAPN3-215ENST00000565559 LINC00304Q8N9R0 145 aa6.42□□□□□ -1.38
CAPN3-215ENST00000565559 LITAFQ99732 161 aa6.42□□□□□ -1.38
CAPN3-215ENST00000565559 MIEN1Q9BRT3 115 aa6.42□□□□□ -1.38
CAPN3-215ENST00000565559 TTTY13Q9BZ97 58 aa6.42□□□□□ -1.38
CAPN3-215ENST00000565559 NDUFC2O95298 119 aa6.41□□□□□ -1.38
CAPN3-215ENST00000565559 TRBV10-2A0A0K0K1G8 114 aa6.4□□□□□ -1.38
CAPN3-215ENST00000565559 PCP2Q8IVA1 136 aa6.4□□□□□ -1.38
CAPN3-215ENST00000565559 IGKV2-28A0A075B6P5 120 aa6.39□□□□□ -1.39
CAPN3-215ENST00000565559 TMEM238C9JI98 176 aa6.39□□□□□ -1.39
CAPN3-215ENST00000565559 BCE1O60756 84 aa6.39□□□□□ -1.39
CAPN3-215ENST00000565559 IGKV2D-28P01615 120 aa6.39□□□□□ -1.39
CAPN3-215ENST00000565559 SOSTDC1Q6X4U4 206 aa6.39□□□□□ -1.39
CAPN3-215ENST00000565559 SCGB1D4Q6XE38 83 aa6.39□□□□□ -1.39
CAPN3-215ENST00000565559 LINC00308Q8TCZ7 52 aa6.39□□□□□ -1.39
CAPN3-215ENST00000565559 KRTAP4-1Q9BYQ7 146 aa6.39□□□□□ -1.39
CAPN3-215ENST00000565559 CTAG1AP78358 180 aa6.38□□□□□ -1.39
CAPN3-215ENST00000565559 JOSD1Q15040 202 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-215ENST00000565559 Q6ZVH6 145 aa6.38□□□□□ -1.39
CAPN3-215ENST00000565559 SPANXDQ9BXN6 97 aa6.38□□□□□ -1.39
CAPN3-215ENST00000565559 TMEM126AQ9H061 195 aa6.38□□□□□ -1.39
CAPN3-215ENST00000565559 SPANXB1Q9NS25 103 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-215ENST00000565559 SPANXCQ9NY87 97 aa6.38□□□□□ -1.39
CAPN3-215ENST00000565559 NCR3O14931 201 aa6.37□□□□□ -1.39
CAPN3-215ENST00000565559 RPL28P46779 137 aaKnown RBP6.37□□□□□ -1.39
CAPN3-215ENST00000565559 COPS9Q8WXC6 57 aa6.37□□□□□ -1.39
CAPN3-215ENST00000565559 KCNQ1DNQ9H478 68 aa6.37□□□□□ -1.39
CAPN3-215ENST00000565559 PRYO14603 147 aa6.36□□□□□ -1.39
CAPN3-215ENST00000565559 IFITM1P13164 125 aa6.36□□□□□ -1.39
CAPN3-215ENST00000565559 NPC2P61916 151 aa6.36□□□□□ -1.39
CAPN3-215ENST00000565559 TRBV10-3A0A0K0K1G6 114 aa6.35□□□□□ -1.39
CAPN3-215ENST00000565559 UBE2AP49459 152 aa6.35□□□□□ -1.39
CAPN3-215ENST00000565559 MT1HP80294 61 aa6.35□□□□□ -1.39
CAPN3-215ENST00000565559 S100A12P80511 92 aa6.35□□□□□ -1.39
CAPN3-215ENST00000565559 KRTAP13-1Q8IUC0 172 aa6.35□□□□□ -1.39
CAPN3-215ENST00000565559 IGLV6-57P01721 117 aa6.34□□□□□ -1.39
CAPN3-215ENST00000565559 COX8AP10176 69 aa6.34□□□□□ -1.39
CAPN3-215ENST00000565559 DDTP30046 118 aa6.34□□□□□ -1.39
CAPN3-215ENST00000565559 SPRR1AP35321 89 aa6.34□□□□□ -1.39
CAPN3-215ENST00000565559 FP248Q71RG6 208 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-215ENST00000565559 LINC00518Q8N0U6 118 aa6.34□□□□□ -1.39
CAPN3-215ENST00000565559 DLEU1O43261 78 aa6.33□□□□□ -1.4
CAPN3-215ENST00000565559 KRTAP13-2Q52LG2 175 aa6.33□□□□□ -1.4
CAPN3-215ENST00000565559 S100A7L2Q5SY68 101 aa6.33□□□□□ -1.4
CAPN3-215ENST00000565559 FAM19A1Q7Z5A9 133 aa6.33□□□□□ -1.4
CAPN3-215ENST00000565559 VAMP8Q9BV40 100 aa6.33□□□□□ -1.4
CAPN3-215ENST00000565559 ANAPC11Q9NYG5 84 aa6.33□□□□□ -1.4
CAPN3-215ENST00000565559 CBY1Q9Y3M2 126 aa6.33□□□□□ -1.4
CAPN3-215ENST00000565559 KRTAP4-16G5E9R7 235 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-215ENST00000565559 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-215ENST00000565559 KRTAP13-3Q3SY46 172 aa6.32□□□□□ -1.4
CAPN3-215ENST00000565559 FAM229BQ4G0N7 80 aa6.32□□□□□ -1.4
CAPN3-215ENST00000565559 SPATA45Q537H7 98 aa6.32□□□□□ -1.4
CAPN3-215ENST00000565559 PYY3Q5JQD4 70 aa6.32□□□□□ -1.4
CAPN3-215ENST00000565559 MUSTN1Q8IVN3 82 aa6.32□□□□□ -1.4
CAPN3-215ENST00000565559 PRLHP81277 87 aa6.31□□□□□ -1.4
CAPN3-215ENST00000565559 PAM16Q9Y3D7 125 aa6.31□□□□□ -1.4
CAPN3-215ENST00000565559 ETDCA0A1B0GVM5 59 aa6.3□□□□□ -1.4
CAPN3-215ENST00000565559 TRAV23DV6A0A075B6W5 121 aa6.29□□□□□ -1.4
CAPN3-215ENST00000565559 OR13C6PQ8NH95 151 aa6.29□□□□□ -1.4
CAPN3-215ENST00000565559 C14orf144Q96I85 54 aa6.29□□□□□ -1.4
CAPN3-215ENST00000565559 SSPOA2VEC9 5147 aa6.28□□□□□ -1.4
CAPN3-215ENST00000565559 M0R2T5 61 aa6.28□□□□□ -1.4
CAPN3-215ENST00000565559 ZNF73O43830 326 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-215ENST00000565559 SLC25A34Q6PIV7 304 aa6.28□□□□□ -1.4
CAPN3-215ENST00000565559 HIGD1BQ9P298 99 aa6.28□□□□□ -1.4
CAPN3-215ENST00000565559 HIGD2AQ9BW72 106 aa6.27□□□□□ -1.41
CAPN3-215ENST00000565559 USH2AO75445 5202 aa6.26□□□□□ -1.41
CAPN3-215ENST00000565559 SYNE2Q8WXH0 6885 aaKnown RBP6.26□□□□□ -1.41
CAPN3-215ENST00000565559 TRAV13-2A0A0B4J235 113 aa6.26□□□□□ -1.41
CAPN3-215ENST00000565559 HINT1P49773 126 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms