RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 SMIM11BQ8TCY0 68 aa3.43□□□□□ -1.86
CAPN3-214ENST00000565274 LINC00167Q96N53 147 aa3.43□□□□□ -1.86
CAPN3-214ENST00000565274 A0A087WVE0 104 aa3.42□□□□□ -1.86
CAPN3-214ENST00000565274 IGKV3D-7A0A0C4DH55 119 aa3.42□□□□□ -1.86
CAPN3-214ENST00000565274 A0A1B0GUV1 79 aa3.42□□□□□ -1.86
CAPN3-214ENST00000565274 MAPK1IP1LQ8NDC0 245 aa3.42□□□□□ -1.86
CAPN3-214ENST00000565274 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
CAPN3-214ENST00000565274 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
CAPN3-214ENST00000565274 C14orf132Q9NPU4 83 aa3.42□□□□□ -1.86
CAPN3-214ENST00000565274 LINC00846Q9NV44 126 aa3.42□□□□□ -1.86
CAPN3-214ENST00000565274 ANKRD17O75179 2603 aaKnown RBP3.42□□□□□ -1.86
CAPN3-214ENST00000565274 CR1P17927 2039 aa3.42□□□□□ -1.86
CAPN3-214ENST00000565274 CSMD1Q96PZ7 3565 aa3.41□□□□□ -1.86
CAPN3-214ENST00000565274 MXRA5Q9NR99 2828 aa3.41□□□□□ -1.86
CAPN3-214ENST00000565274 TRBV6-8A0A0A6YYG3 113 aa3.41□□□□□ -1.86
CAPN3-214ENST00000565274 JMJD7-PLA2G4BH0Y9G9 81 aa3.41□□□□□ -1.86
CAPN3-214ENST00000565274 LECT2O14960 151 aa3.41□□□□□ -1.86
CAPN3-214ENST00000565274 CCL18P55774 89 aa3.41□□□□□ -1.86
CAPN3-214ENST00000565274 C9orf129Q5T035 196 aaKnown RBP3.41□□□□□ -1.86
CAPN3-214ENST00000565274 LINC01006Q8NI28 216 aa3.41□□□□□ -1.86
CAPN3-214ENST00000565274 ORMDL1Q9P0S3 153 aa3.41□□□□□ -1.86
CAPN3-214ENST00000565274 TRBV7-4A0A0J9YYF1 115 aa3.4□□□□□ -1.87
CAPN3-214ENST00000565274 NCR3O14931 201 aa3.4□□□□□ -1.87
CAPN3-214ENST00000565274 LINC00158P58513 81 aa3.4□□□□□ -1.87
CAPN3-214ENST00000565274 ROMO1P60602 79 aa3.4□□□□□ -1.87
CAPN3-214ENST00000565274 CASC10Q5T4H9 136 aa3.4□□□□□ -1.87
CAPN3-214ENST00000565274 C1orf134Q5TEV5 83 aa3.4□□□□□ -1.87
CAPN3-214ENST00000565274 Q8NDZ9 215 aa3.4□□□□□ -1.87
CAPN3-214ENST00000565274 MUC7Q8TAX7 377 aa3.4□□□□□ -1.87
CAPN3-214ENST00000565274 NOP10Q9NPE3 64 aaKnown RBP3.4□□□□□ -1.87
CAPN3-214ENST00000565274 POLQO75417 2590 aa3.4□□□□□ -1.87
CAPN3-214ENST00000565274 SVEP1Q4LDE5 3571 aa3.39□□□□□ -1.87
CAPN3-214ENST00000565274 FBN2P35556 2912 aa3.39□□□□□ -1.87
CAPN3-214ENST00000565274 HELZ2Q9BYK8 2649 aaKnown RBP3.39□□□□□ -1.87
CAPN3-214ENST00000565274 TRGV2A0A075B6R0 118 aa3.39□□□□□ -1.87
CAPN3-214ENST00000565274 CHKB-CPT1BH3BT56 60 aa3.39□□□□□ -1.87
CAPN3-214ENST00000565274 PRR4Q16378 134 aa3.39□□□□□ -1.87
CAPN3-214ENST00000565274 Q8IZM0 81 aa3.39□□□□□ -1.87
CAPN3-214ENST00000565274 LIMD2Q9BT23 127 aa3.39□□□□□ -1.87
CAPN3-214ENST00000565274 TOMM7Q9P0U1 55 aa3.39□□□□□ -1.87
CAPN3-214ENST00000565274 SNURFQ9Y675 71 aa3.39□□□□□ -1.87
CAPN3-214ENST00000565274 CELSR1Q9NYQ6 3014 aa3.39□□□□□ -1.87
CAPN3-214ENST00000565274 ZANQ9Y493 2812 aa3.38□□□□□ -1.87
CAPN3-214ENST00000565274 TRGV4A0A0C4DH28 118 aa3.38□□□□□ -1.87
CAPN3-214ENST00000565274 LINC00959A0A1B0GUT2 108 aa3.38□□□□□ -1.87
CAPN3-214ENST00000565274 RPL37AP8A6NKH3 93 aa3.38□□□□□ -1.87
CAPN3-214ENST00000565274 PSCAO43653 123 aa3.38□□□□□ -1.87
CAPN3-214ENST00000565274 COX17Q14061 63 aa3.38□□□□□ -1.87
CAPN3-214ENST00000565274 C8orf17Q9NRJ1 99 aa3.38□□□□□ -1.87
CAPN3-214ENST00000565274 CELSR2Q9HCU4 2923 aa3.37□□□□□ -1.87
CAPN3-214ENST00000565274 FASNP49327 2511 aaKnown RBP3.37□□□□□ -1.87
CAPN3-214ENST00000565274 UTP20O75691 2785 aaKnown RBP3.37□□□□□ -1.87
CAPN3-214ENST00000565274 TEX15Q9BXT5 2789 aa3.37□□□□□ -1.87
CAPN3-214ENST00000565274 ABCA12Q86UK0 2595 aa3.37□□□□□ -1.87
CAPN3-214ENST00000565274 IGLV4-60A0A075B6I1 120 aa3.37□□□□□ -1.87
CAPN3-214ENST00000565274 TRAV23DV6A0A075B6W5 121 aa3.37□□□□□ -1.87
CAPN3-214ENST00000565274 LOC101927531A0A1B0GV80 90 aa3.37□□□□□ -1.87
CAPN3-214ENST00000565274 UBL5Q9BZL1 73 aa3.37□□□□□ -1.87
CAPN3-214ENST00000565274 PRO0255Q9UI72 69 aa3.37□□□□□ -1.87
CAPN3-214ENST00000565274 NBPF19A0A087WUL8 3843 aa3.37□□□□□ -1.87
CAPN3-214ENST00000565274 CRYBG3Q68DQ2 2970 aa3.36□□□□□ -1.87
CAPN3-214ENST00000565274 CSMD2Q7Z408 3487 aa3.36□□□□□ -1.87
CAPN3-214ENST00000565274 C2CD3Q4AC94 2353 aa3.36□□□□□ -1.87
CAPN3-214ENST00000565274 LOC110117498A0A087WWA1 95 aa3.36□□□□□ -1.87
CAPN3-214ENST00000565274 MAP1AP78559 2803 aaPredicted RBP3.36□□□□□ -1.87
CAPN3-214ENST00000565274 ITPR3Q14573 2671 aa3.36□□□□□ -1.87
CAPN3-214ENST00000565274 TLN2Q9Y4G6 2542 aa3.35□□□□□ -1.87
CAPN3-214ENST00000565274 VPS13CQ709C8 3753 aa3.35□□□□□ -1.87
CAPN3-214ENST00000565274 CENPEQ02224 2701 aa3.35□□□□□ -1.87
CAPN3-214ENST00000565274 IGLV5-37A0A075B6J1 123 aa3.35□□□□□ -1.87
CAPN3-214ENST00000565274 IGKV3OR2-268A0A0C4DH90 116 aa3.35□□□□□ -1.87
CAPN3-214ENST00000565274 A8MWP4 228 aa3.35□□□□□ -1.87
CAPN3-214ENST00000565274 H3BQ85 93 aa3.35□□□□□ -1.87
CAPN3-214ENST00000565274 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
CAPN3-214ENST00000565274 C9orf66Q5T8R8 295 aa3.35□□□□□ -1.87
CAPN3-214ENST00000565274 CASC2Q6XLA1 102 aa3.35□□□□□ -1.87
CAPN3-214ENST00000565274 Q6ZQT0 140 aa3.35□□□□□ -1.87
CAPN3-214ENST00000565274 OCR1Q9BZK8 76 aa3.35□□□□□ -1.87
CAPN3-214ENST00000565274 TENM4Q6N022 2769 aa3.35□□□□□ -1.87
CAPN3-214ENST00000565274 APCP25054 2843 aa3.35□□□□□ -1.87
CAPN3-214ENST00000565274 GVQW2A0A096LPI5 108 aaPredicted RBP3.34□□□□□ -1.87
CAPN3-214ENST00000565274 A0A0J9YWU9 116 aa3.34□□□□□ -1.87
CAPN3-214ENST00000565274 ENHOQ6UWT2 76 aa3.34□□□□□ -1.87
CAPN3-214ENST00000565274 C1orf64Q8NEQ6 169 aa3.34□□□□□ -1.87
CAPN3-214ENST00000565274 TMEM254Q8TBM7 123 aa3.34□□□□□ -1.87
CAPN3-214ENST00000565274 C7orf33Q8WU49 177 aa3.34□□□□□ -1.87
CAPN3-214ENST00000565274 A6NED7 52 aa3.33□□□□□ -1.88
CAPN3-214ENST00000565274 PDE6GP18545 87 aa3.33□□□□□ -1.88
CAPN3-214ENST00000565274 LINC00575Q6W349 94 aa3.33□□□□□ -1.88
CAPN3-214ENST00000565274 WFDC9Q8NEX5 89 aa3.33□□□□□ -1.88
CAPN3-214ENST00000565274 CAMK2N2Q96S95 79 aa3.33□□□□□ -1.88
CAPN3-214ENST00000565274 WFDC10AQ9H1F0 79 aa3.33□□□□□ -1.88
CAPN3-214ENST00000565274 PRR34Q9NV39 138 aa3.33□□□□□ -1.88
CAPN3-214ENST00000565274 SONP18583 2426 aaKnown RBP3.33□□□□□ -1.88
CAPN3-214ENST00000565274 UNC79Q9P2D8 2635 aa3.33□□□□□ -1.88
CAPN3-214ENST00000565274 NOTCH3Q9UM47 2321 aa3.32□□□□□ -1.88
CAPN3-214ENST00000565274 WNK1Q9H4A3 2382 aa3.32□□□□□ -1.88
CAPN3-214ENST00000565274 IGKV2D-30A0A075B6S6 120 aa3.32□□□□□ -1.88
CAPN3-214ENST00000565274 RTL8CO15255 209 aa3.32□□□□□ -1.88
CAPN3-214ENST00000565274 P0C880 135 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms