RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 KLK12Q9UKR0 248 aa10.9□□□□□ -0.67
LINC00554-201ENST00000564841 IGKV4-1P06312 121 aa10.89□□□□□ -0.67
LINC00554-201ENST00000564841 OCR1Q9BZK8 76 aa10.88□□□□□ -0.67
LINC00554-201ENST00000564841 A0A1B0GUV1 79 aa10.88□□□□□ -0.67
LINC00554-201ENST00000564841 REG3AQ06141 175 aa10.88□□□□□ -0.67
LINC00554-201ENST00000564841 IGHV4-28A0A0C4DH34 117 aa10.87□□□□□ -0.67
LINC00554-201ENST00000564841 LINC00612Q8N6U2 182 aa10.87□□□□□ -0.67
LINC00554-201ENST00000564841 FAM30AQ9NZY2 134 aa10.87□□□□□ -0.67
LINC00554-201ENST00000564841 TENM3Q9P273 2699 aa10.87□□□□□ -0.67
LINC00554-201ENST00000564841 SPAG11BQ08648 103 aa10.86□□□□□ -0.67
LINC00554-201ENST00000564841 PDE6GP18545 87 aa10.85□□□□□ -0.67
LINC00554-201ENST00000564841 ATP5EP56381 51 aaPredicted RBP10.85□□□□□ -0.67
LINC00554-201ENST00000564841 PRR4Q16378 134 aa10.85□□□□□ -0.67
LINC00554-201ENST00000564841 KRTAP24-1Q3LI83 254 aa10.85□□□□□ -0.67
LINC00554-201ENST00000564841 DIRC1Q969H9 104 aa10.85□□□□□ -0.67
LINC00554-201ENST00000564841 X6R8D5 127 aa10.85□□□□□ -0.67
LINC00554-201ENST00000564841 ZNF73O43830 326 aaPredicted RBP10.84□□□□□ -0.67
LINC00554-201ENST00000564841 PSPHP1O15172 72 aa10.83□□□□□ -0.68
LINC00554-201ENST00000564841 IGHV4-30-4P0DP06 118 aa10.82□□□□□ -0.68
LINC00554-201ENST00000564841 COX7BP24311 80 aa10.82□□□□□ -0.68
LINC00554-201ENST00000564841 RETNQ9HD89 108 aa10.81□□□□□ -0.68
LINC00554-201ENST00000564841 SMIM29Q86T20 159 aa10.8□□□□□ -0.68
LINC00554-201ENST00000564841 DEFB105AQ8NG35 78 aa10.8□□□□□ -0.68
LINC00554-201ENST00000564841 A8MU10 97 aa10.79□□□□□ -0.68
LINC00554-201ENST00000564841 Q6ZRP5 223 aa10.79□□□□□ -0.68
LINC00554-201ENST00000564841 PRO0255Q9UI72 69 aa10.79□□□□□ -0.68
LINC00554-201ENST00000564841 C6orf48Q9UBA6 75 aa10.78□□□□□ -0.68
LINC00554-201ENST00000564841 APOC4P55056 127 aa10.77□□□□□ -0.68
LINC00554-201ENST00000564841 ERC2-IT1O76042 136 aa10.77□□□□□ -0.69
LINC00554-201ENST00000564841 C1orf64Q8NEQ6 169 aa10.77□□□□□ -0.69
LINC00554-201ENST00000564841 ELOF1P60002 83 aaKnown RBP10.76□□□□□ -0.69
LINC00554-201ENST00000564841 ANK2Q01484 3957 aa10.76□□□□□ -0.69
LINC00554-201ENST00000564841 hDV103S1A0JD37 113 aa10.76□□□□□ -0.69
LINC00554-201ENST00000564841 HIGD2BQ4VC39 106 aa10.75□□□□□ -0.69
LINC00554-201ENST00000564841 KRTAP10-11P60412 298 aa10.74□□□□□ -0.69
LINC00554-201ENST00000564841 A0A0J9YWU9 116 aa10.74□□□□□ -0.69
LINC00554-201ENST00000564841 PMAIP1Q13794 54 aa10.73□□□□□ -0.69
LINC00554-201ENST00000564841 LINC00528Q8N1L1 170 aa10.69□□□□□ -0.7
LINC00554-201ENST00000564841 Q8NAQ8 132 aa10.69□□□□□ -0.7
LINC00554-201ENST00000564841 VPREB1P12018 145 aa10.68□□□□□ -0.7
LINC00554-201ENST00000564841 TRAV22A0A0B4J277 110 aa10.67□□□□□ -0.7
LINC00554-201ENST00000564841 PRR15Q8IV56 129 aa10.67□□□□□ -0.7
LINC00554-201ENST00000564841 SPART-AS1P0CW21 52 aa10.67□□□□□ -0.7
LINC00554-201ENST00000564841 ST20-AS1Q8NBB2 130 aa10.67□□□□□ -0.7
LINC00554-201ENST00000564841 LYRM9A8MSI8 78 aa10.66□□□□□ -0.7
LINC00554-201ENST00000564841 A8MUN3 132 aa10.65□□□□□ -0.7
LINC00554-201ENST00000564841 H3BQ85 93 aa10.65□□□□□ -0.71
LINC00554-201ENST00000564841 DEFB116Q30KQ4 102 aa10.64□□□□□ -0.71
LINC00554-201ENST00000564841 Q8N377 158 aa10.63□□□□□ -0.71
LINC00554-201ENST00000564841 Q1T7F1 81 aa10.63□□□□□ -0.71
LINC00554-201ENST00000564841 CAMK2N2Q96S95 79 aa10.63□□□□□ -0.71
LINC00554-201ENST00000564841 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.62□□□□□ -0.71
LINC00554-201ENST00000564841 A0A0G2JQZ4 141 aa10.62□□□□□ -0.71
LINC00554-201ENST00000564841 A0A1W2PNM2 257 aa10.62□□□□□ -0.71
LINC00554-201ENST00000564841 A0A1W2PNN7 141 aa10.62□□□□□ -0.71
LINC00554-201ENST00000564841 KPRPQ5T749 579 aaPredicted RBP10.62□□□□□ -0.71
LINC00554-201ENST00000564841 Q6ZRU5 148 aa10.61□□□□□ -0.71
LINC00554-201ENST00000564841 K7EQZ3 153 aa10.61□□□□□ -0.71
LINC00554-201ENST00000564841 STAB2Q8WWQ8 2551 aa10.6□□□□□ -0.71
LINC00554-201ENST00000564841 WFDC10BQ8IUB3 73 aa10.6□□□□□ -0.71
LINC00554-201ENST00000564841 M0R378 163 aa10.6□□□□□ -0.71
LINC00554-201ENST00000564841 ZCCHC13Q8WW36 166 aaKnown RBP10.58□□□□□ -0.72
LINC00554-201ENST00000564841 GVQW2A0A096LPI5 108 aaPredicted RBP10.58□□□□□ -0.72
LINC00554-201ENST00000564841 DSCR10P59022 87 aa10.58□□□□□ -0.72
LINC00554-201ENST00000564841 PRR34Q9NV39 138 aa10.56□□□□□ -0.72
LINC00554-201ENST00000564841 CMYA5Q8N3K9 4069 aa10.56□□□□□ -0.72
LINC00554-201ENST00000564841 LCE6AA0A183 80 aa10.55□□□□□ -0.72
LINC00554-201ENST00000564841 PSCAO43653 123 aa10.55□□□□□ -0.72
LINC00554-201ENST00000564841 ETDCA0A1B0GVM5 59 aa10.55□□□□□ -0.72
LINC00554-201ENST00000564841 RPL37AP8A6NKH3 93 aa10.55□□□□□ -0.72
LINC00554-201ENST00000564841 TENM2Q9NT68 2774 aa10.54□□□□□ -0.72
LINC00554-201ENST00000564841 CSMD3Q7Z407 3707 aa10.54□□□□□ -0.72
LINC00554-201ENST00000564841 SYCNQ0VAF6 134 aa10.53□□□□□ -0.72
LINC00554-201ENST00000564841 LELP1Q5T871 98 aa10.53□□□□□ -0.72
LINC00554-201ENST00000564841 SERTAD4-AS1Q5TG53 156 aa10.53□□□□□ -0.72
LINC00554-201ENST00000564841 C1orf137Q5JT78 98 aa10.52□□□□□ -0.72
LINC00554-201ENST00000564841 IGLV5-48A0A075B6I7 105 aa10.52□□□□□ -0.73
LINC00554-201ENST00000564841 WFDC13Q8IUB5 93 aa10.52□□□□□ -0.73
LINC00554-201ENST00000564841 Q5VV11 94 aa10.5□□□□□ -0.73
LINC00554-201ENST00000564841 EGFEM1PQ0D2K5 195 aa10.49□□□□□ -0.73
LINC00554-201ENST00000564841 C7orf33Q8WU49 177 aa10.49□□□□□ -0.73
LINC00554-201ENST00000564841 Q9BRP9 147 aa10.49□□□□□ -0.73
LINC00554-201ENST00000564841 C15orf56Q8N910 161 aa10.48□□□□□ -0.73
LINC00554-201ENST00000564841 C11orf45Q8TAV5 145 aa10.48□□□□□ -0.73
LINC00554-201ENST00000564841 DEFB131BA0A096LNP1 70 aa10.47□□□□□ -0.73
LINC00554-201ENST00000564841 SPTSSBQ8NFR3 76 aa10.47□□□□□ -0.73
LINC00554-201ENST00000564841 IGKV2D-24A0A075B6R9 120 aa10.47□□□□□ -0.73
LINC00554-201ENST00000564841 FAM168BA1KXE4 195 aa10.47□□□□□ -0.73
LINC00554-201ENST00000564841 SRRM2Q9UQ35 2752 aaKnown RBP10.46□□□□□ -0.73
LINC00554-201ENST00000564841 COL7A1Q02388 2944 aa10.46□□□□□ -0.74
LINC00554-201ENST00000564841 CHKB-CPT1BH3BT56 60 aa10.46□□□□□ -0.74
LINC00554-201ENST00000564841 NKAPP1Q8N9T2 125 aa10.45□□□□□ -0.74
LINC00554-201ENST00000564841 Q8NBF4 154 aa10.45□□□□□ -0.74
LINC00554-201ENST00000564841 LINC00208Q96KT6 92 aa10.45□□□□□ -0.74
LINC00554-201ENST00000564841 MDFIQ99750 246 aa10.44□□□□□ -0.74
LINC00554-201ENST00000564841 HCG22E2RYF7 251 aa10.44□□□□□ -0.74
LINC00554-201ENST00000564841 CYP4F30PQ9H0H9 118 aa10.44□□□□□ -0.74
LINC00554-201ENST00000564841 RPL37AP61513 92 aaKnown RBP10.44□□□□□ -0.74
LINC00554-201ENST00000564841 C16orf90A8MZG2 172 aa10.43□□□□□ -0.74
LINC00554-201ENST00000564841 KRTAP26-1Q6PEX3 210 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms