RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 KLK12Q9UKR0 248 aa3.58□□□□□ -1.84
CHD9-210ENST00000564582 REV3LO60673 3130 aa3.58□□□□□ -1.84
CHD9-210ENST00000564582 VPS13AQ96RL7 3174 aa3.58□□□□□ -1.84
CHD9-210ENST00000564582 IGKV2D-24A0A075B6R9 120 aa3.57□□□□□ -1.84
CHD9-210ENST00000564582 H0Y9P7 68 aa3.57□□□□□ -1.84
CHD9-210ENST00000564582 GIG44P09565 113 aaPredicted RBP3.57□□□□□ -1.84
CHD9-210ENST00000564582 DEFB130BP0DP73 79 aa3.57□□□□□ -1.84
CHD9-210ENST00000564582 DEFB130AP0DP74 79 aa3.57□□□□□ -1.84
CHD9-210ENST00000564582 Q8N9L7 120 aa3.57□□□□□ -1.84
CHD9-210ENST00000564582 SPTAN1Q13813 2472 aaKnown RBP3.56□□□□□ -1.84
CHD9-210ENST00000564582 USP34Q70CQ2 3546 aa3.56□□□□□ -1.84
CHD9-210ENST00000564582 DEFB131BA0A096LNP1 70 aa3.56□□□□□ -1.84
CHD9-210ENST00000564582 A0A1W2PNM2 257 aa3.56□□□□□ -1.84
CHD9-210ENST00000564582 A0A1W2PPR1 153 aa3.56□□□□□ -1.84
CHD9-210ENST00000564582 LRCOL1A6NCL2 159 aa3.56□□□□□ -1.84
CHD9-210ENST00000564582 SPRR1AP35321 89 aa3.56□□□□□ -1.84
CHD9-210ENST00000564582 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
CHD9-210ENST00000564582 C9orf163Q8N9P6 203 aa3.56□□□□□ -1.84
CHD9-210ENST00000564582 COL6A3P12111 3177 aa3.55□□□□□ -1.84
CHD9-210ENST00000564582 TRIOBPQ9H2D6 2365 aa3.55□□□□□ -1.84
CHD9-210ENST00000564582 K7EQZ3 153 aa3.55□□□□□ -1.84
CHD9-210ENST00000564582 SPART-AS1P0CW21 52 aa3.55□□□□□ -1.84
CHD9-210ENST00000564582 C10orf99Q6UWK7 81 aa3.55□□□□□ -1.84
CHD9-210ENST00000564582 COA5Q86WW8 74 aa3.55□□□□□ -1.84
CHD9-210ENST00000564582 DEFB123Q8N688 67 aa3.55□□□□□ -1.84
CHD9-210ENST00000564582 NCOR1O75376 2440 aa3.55□□□□□ -1.84
CHD9-210ENST00000564582 KALRNO60229 2985 aa3.55□□□□□ -1.84
CHD9-210ENST00000564582 FRYLO94915 3013 aa3.54□□□□□ -1.84
CHD9-210ENST00000564582 CDH23Q9H251 3354 aa3.54□□□□□ -1.84
CHD9-210ENST00000564582 PTPRZ1P23471 2315 aaPredicted RBP3.54□□□□□ -1.84
CHD9-210ENST00000564582 AKAP6Q13023 2319 aa3.54□□□□□ -1.84
CHD9-210ENST00000564582 NOTCH3Q9UM47 2321 aa3.54□□□□□ -1.84
CHD9-210ENST00000564582 A8MWP4 228 aa3.54□□□□□ -1.84
CHD9-210ENST00000564582 C8orf87E5RJ46 101 aa3.54□□□□□ -1.84
CHD9-210ENST00000564582 RPL37AP61513 92 aaKnown RBP3.54□□□□□ -1.84
CHD9-210ENST00000564582 DEFB136Q30KP8 78 aa3.54□□□□□ -1.84
CHD9-210ENST00000564582 Q8NDZ9 215 aa3.54□□□□□ -1.84
CHD9-210ENST00000564582 XAGE1AQ9HD64 81 aa3.54□□□□□ -1.84
CHD9-210ENST00000564582 PLAC8Q9NZF1 115 aa3.54□□□□□ -1.84
CHD9-210ENST00000564582 WNK1Q9H4A3 2382 aa3.54□□□□□ -1.84
CHD9-210ENST00000564582 SPTBN5Q9NRC6 3674 aaKnown RBP3.53□□□□□ -1.84
CHD9-210ENST00000564582 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.53□□□□□ -1.84
CHD9-210ENST00000564582 IGLV10-54A0A075B6I4 117 aa3.53□□□□□ -1.84
CHD9-210ENST00000564582 MOBPQ13875 183 aa3.53□□□□□ -1.84
CHD9-210ENST00000564582 LINC01554Q52M75 96 aa3.53□□□□□ -1.84
CHD9-210ENST00000564582 CLPSL2Q6UWE3 100 aa3.53□□□□□ -1.84
CHD9-210ENST00000564582 RETNLBQ9BQ08 111 aa3.53□□□□□ -1.84
CHD9-210ENST00000564582 OTOGLQ3ZCN5 2332 aa3.52□□□□□ -1.85
CHD9-210ENST00000564582 IGLV1-50A0A075B6I6 118 aa3.52□□□□□ -1.85
CHD9-210ENST00000564582 Q8NAQ8 132 aa3.52□□□□□ -1.85
CHD9-210ENST00000564582 ST20-AS1Q8NBB2 130 aa3.52□□□□□ -1.85
CHD9-210ENST00000564582 DEFB105AQ8NG35 78 aa3.52□□□□□ -1.85
CHD9-210ENST00000564582 SPTA1P02549 2419 aa3.52□□□□□ -1.85
CHD9-210ENST00000564582 C2CD3Q4AC94 2353 aa3.51□□□□□ -1.85
CHD9-210ENST00000564582 KRTAP4-16G5E9R7 235 aaPredicted RBP3.51□□□□□ -1.85
CHD9-210ENST00000564582 WDFY3Q8IZQ1 3526 aa3.51□□□□□ -1.85
CHD9-210ENST00000564582 PRUNE2Q8WUY3 3088 aa3.51□□□□□ -1.85
CHD9-210ENST00000564582 H0Y9J4 135 aa3.5□□□□□ -1.85
CHD9-210ENST00000564582 ACYP2P14621 99 aa3.5□□□□□ -1.85
CHD9-210ENST00000564582 Q6ZR54 194 aa3.5□□□□□ -1.85
CHD9-210ENST00000564582 C7orf33Q8WU49 177 aa3.5□□□□□ -1.85
CHD9-210ENST00000564582 SPRR1BP22528 89 aa3.49□□□□□ -1.85
CHD9-210ENST00000564582 WFDC10BQ8IUB3 73 aa3.49□□□□□ -1.85
CHD9-210ENST00000564582 WFDC13Q8IUB5 93 aa3.49□□□□□ -1.85
CHD9-210ENST00000564582 C11orf45Q8TAV5 145 aa3.49□□□□□ -1.85
CHD9-210ENST00000564582 TLN1Q9Y490 2541 aaKnown RBP3.48□□□□□ -1.85
CHD9-210ENST00000564582 TACC2O95359 2948 aa3.48□□□□□ -1.85
CHD9-210ENST00000564582 PRR4Q16378 134 aa3.48□□□□□ -1.85
CHD9-210ENST00000564582 LINC01556Q5JQF7 62 aa3.48□□□□□ -1.85
CHD9-210ENST00000564582 REG3GQ6UW15 175 aa3.48□□□□□ -1.85
CHD9-210ENST00000564582 FREM2Q5SZK8 3169 aa3.47□□□□□ -1.85
CHD9-210ENST00000564582 A0A087WSZ3 146 aa3.46□□□□□ -1.86
CHD9-210ENST00000564582 A0A096LPF7 62 aa3.46□□□□□ -1.86
CHD9-210ENST00000564582 UQCR11O14957 56 aa3.46□□□□□ -1.86
CHD9-210ENST00000564582 SPAG11AQ6PDA7 123 aa3.46□□□□□ -1.86
CHD9-210ENST00000564582 SPATA8Q6RVD6 105 aa3.46□□□□□ -1.86
CHD9-210ENST00000564582 IGFL1Q6UW32 110 aa3.46□□□□□ -1.86
CHD9-210ENST00000564582 C15orf56Q8N910 161 aa3.46□□□□□ -1.86
CHD9-210ENST00000564582 LINC00472Q9H8W2 130 aa3.46□□□□□ -1.86
CHD9-210ENST00000564582 ANKRD11Q6UB99 2663 aaPredicted RBP3.46□□□□□ -1.86
CHD9-210ENST00000564582 A0A1B0GVY2 172 aa3.45□□□□□ -1.86
CHD9-210ENST00000564582 LINC00313P59037 77 aa3.45□□□□□ -1.86
CHD9-210ENST00000564582 KRTAP26-1Q6PEX3 210 aa3.45□□□□□ -1.86
CHD9-210ENST00000564582 ADGRG4Q8IZF6 3080 aa3.45□□□□□ -1.86
CHD9-210ENST00000564582 CSPG4Q6UVK1 2322 aa3.45□□□□□ -1.86
CHD9-210ENST00000564582 SPEGQ15772 3267 aa3.45□□□□□ -1.86
CHD9-210ENST00000564582 ABCA2Q9BZC7 2435 aa3.44□□□□□ -1.86
CHD9-210ENST00000564582 MGAQ8IWI9 3026 aa3.44□□□□□ -1.86
CHD9-210ENST00000564582 IGKV2-24A0A0C4DH68 120 aa3.43□□□□□ -1.86
CHD9-210ENST00000564582 PRB1P04280 392 aa3.43□□□□□ -1.86
CHD9-210ENST00000564582 GVINP1Q7Z2Y8 2422 aa3.43□□□□□ -1.86
CHD9-210ENST00000564582 ZFHX3Q15911 3703 aa3.42□□□□□ -1.86
CHD9-210ENST00000564582 CELSR3Q9NYQ7 3312 aa3.42□□□□□ -1.86
CHD9-210ENST00000564582 MMP24-AS1A0A0U1RRL7 71 aa3.42□□□□□ -1.86
CHD9-210ENST00000564582 A0A1B0GU69 56 aa3.42□□□□□ -1.86
CHD9-210ENST00000564582 DNAH10OSP0CZ25 163 aa3.42□□□□□ -1.86
CHD9-210ENST00000564582 DEFB113Q30KQ7 82 aa3.42□□□□□ -1.86
CHD9-210ENST00000564582 WDFY4Q6ZS81 3184 aa3.42□□□□□ -1.86
CHD9-210ENST00000564582 MYO15AQ9UKN7 3530 aa3.41□□□□□ -1.86
CHD9-210ENST00000564582 DMXL2Q8TDJ6 3036 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms