RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 HAMPP81172 84 aa13.03□□□□□ -0.32
MSLN-205ENST00000563941 TLX1NBP0CAT3 122 aa13.02□□□□□ -0.33
MSLN-205ENST00000563941 SMIM20Q8N5G0 67 aa13.02□□□□□ -0.33
MSLN-205ENST00000563941 CASC10Q5T4H9 136 aa13.01□□□□□ -0.33
MSLN-205ENST00000563941 NBEAL1Q6ZS30 2694 aa13.01□□□□□ -0.33
MSLN-205ENST00000563941 MRAPQ8TCY5 172 aa13.01□□□□□ -0.33
MSLN-205ENST00000563941 TM2D3Q9BRN9 247 aa13.01□□□□□ -0.33
MSLN-205ENST00000563941 CYSTM1Q9H1C7 97 aa12.99□□□□□ -0.33
MSLN-205ENST00000563941 PLA2G2DQ9UNK4 145 aa12.98□□□□□ -0.33
MSLN-205ENST00000563941 CXCL6P80162 114 aa12.97□□□□□ -0.33
MSLN-205ENST00000563941 FAM168BA1KXE4 195 aa12.95□□□□□ -0.34
MSLN-205ENST00000563941 K7EIL1 84 aa12.95□□□□□ -0.34
MSLN-205ENST00000563941 RMI2Q96E14 147 aa12.95□□□□□ -0.34
MSLN-205ENST00000563941 RPL37AP8A6NKH3 93 aa12.94□□□□□ -0.34
MSLN-205ENST00000563941 IGLV5-37A0A075B6J1 123 aa12.93□□□□□ -0.34
MSLN-205ENST00000563941 DEFB105AQ8NG35 78 aa12.92□□□□□ -0.34
MSLN-205ENST00000563941 DNAH1Q9P2D7 4330 aa12.92□□□□□ -0.34
MSLN-205ENST00000563941 IGLV1-50A0A075B6I6 118 aa12.91□□□□□ -0.34
MSLN-205ENST00000563941 PRYO14603 147 aa12.91□□□□□ -0.34
MSLN-205ENST00000563941 Q8N377 158 aa12.91□□□□□ -0.34
MSLN-205ENST00000563941 Q6ZRX8 168 aa12.9□□□□□ -0.34
MSLN-205ENST00000563941 SCXQ7RTU7 201 aa12.9□□□□□ -0.34
MSLN-205ENST00000563941 HUWE1Q7Z6Z7 4374 aaKnown RBP12.9□□□□□ -0.34
MSLN-205ENST00000563941 KRTAP7-1Q8IUC3 87 aa12.89□□□□□ -0.35
MSLN-205ENST00000563941 DHRS4-AS1Q9P1J3 65 aa12.89□□□□□ -0.35
MSLN-205ENST00000563941 KRTAP4-16G5E9R7 235 aaPredicted RBP12.89□□□□□ -0.35
MSLN-205ENST00000563941 BCE1O60756 84 aa12.88□□□□□ -0.35
MSLN-205ENST00000563941 SPRR1AP35321 89 aa12.88□□□□□ -0.35
MSLN-205ENST00000563941 Q9BRP9 147 aa12.88□□□□□ -0.35
MSLN-205ENST00000563941 MGAM2Q2M2H8 2515 aa12.87□□□□□ -0.35
MSLN-205ENST00000563941 ETDCA0A1B0GVM5 59 aa12.86□□□□□ -0.35
MSLN-205ENST00000563941 FAM19A5Q7Z5A7 132 aaPredicted RBP12.86□□□□□ -0.35
MSLN-205ENST00000563941 LOC107984640A0A0U1RRK4 108 aa12.85□□□□□ -0.35
MSLN-205ENST00000563941 TMEM258P61165 79 aa12.85□□□□□ -0.35
MSLN-205ENST00000563941 MRPL55Q7Z7F7 128 aaKnown RBP12.84□□□□□ -0.35
MSLN-205ENST00000563941 IGLV5-48A0A075B6I7 105 aa12.83□□□□□ -0.35
MSLN-205ENST00000563941 TRAV7A0A075B6U4 112 aa12.83□□□□□ -0.35
MSLN-205ENST00000563941 C20orf197Q8N268 126 aa12.81□□□□□ -0.36
MSLN-205ENST00000563941 C3orf84H3BNL1 204 aa12.8□□□□□ -0.36
MSLN-205ENST00000563941 NREPQ16612 68 aa12.8□□□□□ -0.36
MSLN-205ENST00000563941 ST20-AS1Q8NBB2 130 aa12.8□□□□□ -0.36
MSLN-205ENST00000563941 J3KT08 172 aa12.78□□□□□ -0.36
MSLN-205ENST00000563941 KRTAP1-5Q9BYS1 174 aa12.77□□□□□ -0.36
MSLN-205ENST00000563941 ERC2-IT1O76042 136 aa12.76□□□□□ -0.37
MSLN-205ENST00000563941 TNP2Q05952 138 aa12.76□□□□□ -0.37
MSLN-205ENST00000563941 UBE2BP63146 152 aa12.75□□□□□ -0.37
MSLN-205ENST00000563941 REG3GQ6UW15 175 aa12.75□□□□□ -0.37
MSLN-205ENST00000563941 Q8N9L7 120 aa12.75□□□□□ -0.37
MSLN-205ENST00000563941 FUSP35637 526 aaKnown RBP eCLIP12.74□□□□□ -0.37
MSLN-205ENST00000563941 IGKV4-1P06312 121 aa12.73□□□□□ -0.37
MSLN-205ENST00000563941 RPS28P62857 69 aaKnown RBP12.73□□□□□ -0.37
MSLN-205ENST00000563941 DPH3Q96FX2 82 aa12.73□□□□□ -0.37
MSLN-205ENST00000563941 A0A1W2PNM2 257 aa12.73□□□□□ -0.37
MSLN-205ENST00000563941 C1orf137Q5JT78 98 aa12.73□□□□□ -0.37
MSLN-205ENST00000563941 BPY2O14599 106 aa12.72□□□□□ -0.37
MSLN-205ENST00000563941 A0A096LNI7 61 aa12.71□□□□□ -0.37
MSLN-205ENST00000563941 MDFIQ99750 246 aa12.71□□□□□ -0.37
MSLN-205ENST00000563941 A0A1B0GW54 56 aa12.7□□□□□ -0.38
MSLN-205ENST00000563941 PSCAO43653 123 aa12.7□□□□□ -0.38
MSLN-205ENST00000563941 CNBPP62633 177 aaKnown RBP12.7□□□□□ -0.38
MSLN-205ENST00000563941 IGKV2-24A0A0C4DH68 120 aa12.69□□□□□ -0.38
MSLN-205ENST00000563941 C16orf90A8MZG2 172 aa12.69□□□□□ -0.38
MSLN-205ENST00000563941 UBE2DNLQ8IWF7 75 aa12.69□□□□□ -0.38
MSLN-205ENST00000563941 Q8NBF4 154 aa12.68□□□□□ -0.38
MSLN-205ENST00000563941 KLKP1Q107X0 134 aa12.68□□□□□ -0.38
MSLN-205ENST00000563941 APLNQ9ULZ1 77 aa12.67□□□□□ -0.38
MSLN-205ENST00000563941 DNAH10Q8IVF4 4471 aa12.66□□□□□ -0.38
MSLN-205ENST00000563941 A0A1W2PNN7 141 aa12.65□□□□□ -0.38
MSLN-205ENST00000563941 H7BZZ5 65 aa12.65□□□□□ -0.38
MSLN-205ENST00000563941 COL7A1Q02388 2944 aa12.65□□□□□ -0.38
MSLN-205ENST00000563941 SNURFQ9Y675 71 aa12.65□□□□□ -0.38
MSLN-205ENST00000563941 SMIM29Q86T20 159 aa12.64□□□□□ -0.39
MSLN-205ENST00000563941 STAB2Q8WWQ8 2551 aa12.64□□□□□ -0.39
MSLN-205ENST00000563941 LYSTQ99698 3801 aa12.64□□□□□ -0.39
MSLN-205ENST00000563941 SPRR4Q96PI1 79 aa12.64□□□□□ -0.39
MSLN-205ENST00000563941 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.62□□□□□ -0.39
MSLN-205ENST00000563941 PRLHP81277 87 aa12.62□□□□□ -0.39
MSLN-205ENST00000563941 DNAH9Q9NYC9 4486 aa12.61□□□□□ -0.39
MSLN-205ENST00000563941 FAM236DA0A1B0GTK5 79 aa12.61□□□□□ -0.39
MSLN-205ENST00000563941 OXTP01178 125 aa12.61□□□□□ -0.39
MSLN-205ENST00000563941 FAM236CP0DP71 79 aa12.61□□□□□ -0.39
MSLN-205ENST00000563941 LINC00476Q8WZB0 136 aa12.6□□□□□ -0.39
MSLN-205ENST00000563941 F8WEM9 126 aa12.59□□□□□ -0.39
MSLN-205ENST00000563941 C14orf177Q52M58 125 aa12.59□□□□□ -0.39
MSLN-205ENST00000563941 OCR1Q9BZK8 76 aa12.57□□□□□ -0.4
MSLN-205ENST00000563941 CHTF8P0CG12 524 aa12.56□□□□□ -0.4
MSLN-205ENST00000563941 HIGD2AQ9BW72 106 aa12.56□□□□□ -0.4
MSLN-205ENST00000563941 TMEM254Q8TBM7 123 aa12.55□□□□□ -0.4
MSLN-205ENST00000563941 B9D2Q9BPU9 175 aa12.55□□□□□ -0.4
MSLN-205ENST00000563941 PHF5AQ7RTV0 110 aaKnown RBP12.54□□□□□ -0.4
MSLN-205ENST00000563941 A0A0G2JQZ4 141 aa12.53□□□□□ -0.4
MSLN-205ENST00000563941 IGFL1Q6UW32 110 aa12.53□□□□□ -0.4
MSLN-205ENST00000563941 DYNC2H1Q8NCM8 4307 aaKnown RBP12.53□□□□□ -0.4
MSLN-205ENST00000563941 KRTAP11-1Q8IUC1 163 aa12.53□□□□□ -0.4
MSLN-205ENST00000563941 NDUFC1O43677 76 aa12.52□□□□□ -0.41
MSLN-205ENST00000563941 DSCR10P59022 87 aa12.52□□□□□ -0.41
MSLN-205ENST00000563941 LRCOL1A6NCL2 159 aa12.5□□□□□ -0.41
MSLN-205ENST00000563941 IGLV8-61A0A075B6I0 122 aa12.49□□□□□ -0.41
MSLN-205ENST00000563941 C9orf163Q8N9P6 203 aa12.49□□□□□ -0.41
MSLN-205ENST00000563941 NBDYA0A0U1RRE5 68 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms