RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 IGLV7-46A0A075B6I9 117 aa5.92□□□□□ -1.46
SF3B3-204ENST00000563739 ZNF815PA8K554 130 aa5.92□□□□□ -1.46
SF3B3-204ENST00000563739 NDUFC2-KCTD14E9PQ53 114 aa5.92□□□□□ -1.46
SF3B3-204ENST00000563739 J3QQQ9 107 aa5.92□□□□□ -1.46
SF3B3-204ENST00000563739 TSPEAR-AS2P59090 65 aa5.92□□□□□ -1.46
SF3B3-204ENST00000563739 C22orf24Q9Y442 160 aa5.92□□□□□ -1.46
SF3B3-204ENST00000563739 TAX1BP3O14907 124 aa5.91□□□□□ -1.46
SF3B3-204ENST00000563739 CRYGAP11844 174 aa5.91□□□□□ -1.46
SF3B3-204ENST00000563739 LGALS3P17931 250 aaKnown RBP5.91□□□□□ -1.46
SF3B3-204ENST00000563739 CEND1Q8N111 149 aa5.91□□□□□ -1.46
SF3B3-204ENST00000563739 A6NDN8 102 aa5.9□□□□□ -1.46
SF3B3-204ENST00000563739 ASB16-AS1Q495Z4 193 aa5.9□□□□□ -1.46
SF3B3-204ENST00000563739 LINC00304Q8N9R0 145 aa5.9□□□□□ -1.46
SF3B3-204ENST00000563739 BCE1O60756 84 aa5.89□□□□□ -1.47
SF3B3-204ENST00000563739 KRTAP13-3Q3SY46 172 aa5.89□□□□□ -1.47
SF3B3-204ENST00000563739 XP32Q5T750 250 aa5.89□□□□□ -1.47
SF3B3-204ENST00000563739 SCGB1D4Q6XE38 83 aa5.89□□□□□ -1.47
SF3B3-204ENST00000563739 HIST1H4GQ99525 98 aa5.89□□□□□ -1.47
SF3B3-204ENST00000563739 FXYD2P54710 66 aa5.88□□□□□ -1.47
SF3B3-204ENST00000563739 SFTA2Q6UW10 78 aa5.88□□□□□ -1.47
SF3B3-204ENST00000563739 PPDPFQ9H3Y8 114 aa5.88□□□□□ -1.47
SF3B3-204ENST00000563739 XAGE1AQ9HD64 81 aa5.88□□□□□ -1.47
SF3B3-204ENST00000563739 SPANXB1Q9NS25 103 aaPredicted RBP5.88□□□□□ -1.47
SF3B3-204ENST00000563739 FLGP20930 4061 aaPredicted RBP5.87□□□□□ -1.47
SF3B3-204ENST00000563739 H3BS24 57 aa5.87□□□□□ -1.47
SF3B3-204ENST00000563739 SMIM13P0DJ93 91 aa5.87□□□□□ -1.47
SF3B3-204ENST00000563739 LINC01547P58512 204 aaPredicted RBP5.87□□□□□ -1.47
SF3B3-204ENST00000563739 Q6ZVH6 145 aa5.87□□□□□ -1.47
SF3B3-204ENST00000563739 ZNF625Q96I27 306 aaPredicted RBP5.87□□□□□ -1.47
SF3B3-204ENST00000563739 A0A0J9YXY3 114 aa5.86□□□□□ -1.47
SF3B3-204ENST00000563739 MT1HP80294 61 aa5.86□□□□□ -1.47
SF3B3-204ENST00000563739 FAM229BQ4G0N7 80 aa5.86□□□□□ -1.47
SF3B3-204ENST00000563739 ERG28Q9UKR5 140 aa5.86□□□□□ -1.47
SF3B3-204ENST00000563739 SSPOA2VEC9 5147 aa5.86□□□□□ -1.47
SF3B3-204ENST00000563739 A0A1B0GWB2 263 aa5.85□□□□□ -1.47
SF3B3-204ENST00000563739 C9orf118A6NHY6 69 aa5.85□□□□□ -1.47
SF3B3-204ENST00000563739 RPL28P46779 137 aaKnown RBP5.85□□□□□ -1.47
SF3B3-204ENST00000563739 C3orf22Q8N5N4 141 aa5.85□□□□□ -1.47
SF3B3-204ENST00000563739 NDUFA12Q9UI09 145 aa5.85□□□□□ -1.47
SF3B3-204ENST00000563739 MRPL55Q7Z7F7 128 aaKnown RBP5.84□□□□□ -1.47
SF3B3-204ENST00000563739 LINC00167Q96N53 147 aa5.84□□□□□ -1.47
SF3B3-204ENST00000563739 NHP2Q9NX24 153 aaKnown RBP5.84□□□□□ -1.47
SF3B3-204ENST00000563739 RPL37AP8A6NKH3 93 aa5.83□□□□□ -1.48
SF3B3-204ENST00000563739 TMEM238C9JI98 176 aa5.83□□□□□ -1.48
SF3B3-204ENST00000563739 TIMM17BO60830 172 aa5.83□□□□□ -1.48
SF3B3-204ENST00000563739 PFN2P35080 140 aa5.83□□□□□ -1.48
SF3B3-204ENST00000563739 COX17Q14061 63 aa5.83□□□□□ -1.48
SF3B3-204ENST00000563739 RAB37Q96AX2 223 aa5.83□□□□□ -1.48
SF3B3-204ENST00000563739 K7ERJ3 54 aa5.82□□□□□ -1.48
SF3B3-204ENST00000563739 HERV-K104P63124 156 aa5.82□□□□□ -1.48
SF3B3-204ENST00000563739 VAMP3Q15836 100 aa5.82□□□□□ -1.48
SF3B3-204ENST00000563739 LITAFQ99732 161 aa5.82□□□□□ -1.48
SF3B3-204ENST00000563739 SPANXDQ9BXN6 97 aa5.82□□□□□ -1.48
SF3B3-204ENST00000563739 SPANXCQ9NY87 97 aa5.82□□□□□ -1.48
SF3B3-204ENST00000563739 USH2AO75445 5202 aa5.82□□□□□ -1.48
SF3B3-204ENST00000563739 IGLV5-37A0A075B6J1 123 aa5.81□□□□□ -1.48
SF3B3-204ENST00000563739 H3BUT2 72 aa5.81□□□□□ -1.48
SF3B3-204ENST00000563739 UBE2V1Q13404 147 aa5.81□□□□□ -1.48
SF3B3-204ENST00000563739 MEIG1Q5JSS6 88 aa5.81□□□□□ -1.48
SF3B3-204ENST00000563739 SND1-IT1Q9HBX3 110 aa5.81□□□□□ -1.48
SF3B3-204ENST00000563739 A0A1W2PPM0 123 aa5.8□□□□□ -1.48
SF3B3-204ENST00000563739 GAGE10A6NGK3 116 aa5.8□□□□□ -1.48
SF3B3-204ENST00000563739 LINC00158P58513 81 aa5.8□□□□□ -1.48
SF3B3-204ENST00000563739 RPL24P83731 157 aaKnown RBP5.8□□□□□ -1.48
SF3B3-204ENST00000563739 ADAMTSL4-AS1Q5T5F5 129 aa5.8□□□□□ -1.48
SF3B3-204ENST00000563739 MUSTN1Q8IVN3 82 aa5.8□□□□□ -1.48
SF3B3-204ENST00000563739 A0A0U1RRA0 63 aa5.79□□□□□ -1.48
SF3B3-204ENST00000563739 CFC1BP0CG36 223 aa5.79□□□□□ -1.48
SF3B3-204ENST00000563739 CFC1P0CG37 223 aa5.79□□□□□ -1.48
SF3B3-204ENST00000563739 IFITM1P13164 125 aa5.79□□□□□ -1.48
SF3B3-204ENST00000563739 KRTAP10-6P60371 365 aaPredicted RBP5.79□□□□□ -1.48
SF3B3-204ENST00000563739 PRLHP81277 87 aa5.79□□□□□ -1.48
SF3B3-204ENST00000563739 FP248Q71RG6 208 aaPredicted RBP5.79□□□□□ -1.48
SF3B3-204ENST00000563739 NAA38Q9BRA0 125 aaKnown RBP5.79□□□□□ -1.48
SF3B3-204ENST00000563739 A4D1N5 150 aa5.78□□□□□ -1.48
SF3B3-204ENST00000563739 MIR7-3HGQ8N6C7 128 aa5.78□□□□□ -1.48
SF3B3-204ENST00000563739 A0A0B4J2C4 111 aa5.77□□□□□ -1.49
SF3B3-204ENST00000563739 K7EP34 96 aa5.77□□□□□ -1.49
SF3B3-204ENST00000563739 VPREB1P12018 145 aa5.77□□□□□ -1.49
SF3B3-204ENST00000563739 FABP2P12104 132 aa5.77□□□□□ -1.49
SF3B3-204ENST00000563739 GTF2H5Q6ZYL4 71 aa5.77□□□□□ -1.49
SF3B3-204ENST00000563739 NKAPP1Q8N9T2 125 aa5.77□□□□□ -1.49
SF3B3-204ENST00000563739 Q8NDZ9 215 aa5.77□□□□□ -1.49
SF3B3-204ENST00000563739 PRO1854Q9UHT4 67 aa5.77□□□□□ -1.49
SF3B3-204ENST00000563739 UBE2AP49459 152 aa5.75□□□□□ -1.49
SF3B3-204ENST00000563739 DAND5Q8N907 189 aa5.75□□□□□ -1.49
SF3B3-204ENST00000563739 LINC00308Q8TCZ7 52 aa5.75□□□□□ -1.49
SF3B3-204ENST00000563739 COPS9Q8WXC6 57 aa5.75□□□□□ -1.49
SF3B3-204ENST00000563739 SPCS1Q9Y6A9 102 aa5.75□□□□□ -1.49
SF3B3-204ENST00000563739 SYNE2Q8WXH0 6885 aaKnown RBP5.74□□□□□ -1.49
SF3B3-204ENST00000563739 IGKV2-28A0A075B6P5 120 aa5.74□□□□□ -1.49
SF3B3-204ENST00000563739 IGKV2D-28P01615 120 aa5.74□□□□□ -1.49
SF3B3-204ENST00000563739 NPC2P61916 151 aa5.74□□□□□ -1.49
SF3B3-204ENST00000563739 M0R378 163 aa5.73□□□□□ -1.49
SF3B3-204ENST00000563739 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
SF3B3-204ENST00000563739 SOSTDC1Q6X4U4 206 aa5.73□□□□□ -1.49
SF3B3-204ENST00000563739 TMEM126AQ9H061 195 aa5.73□□□□□ -1.49
SF3B3-204ENST00000563739 FCGBPQ9Y6R7 5405 aaPredicted RBP5.72□□□□□ -1.49
SF3B3-204ENST00000563739 LOC107984156A0A0G2JMH3 177 aa5.72□□□□□ -1.49
SF3B3-204ENST00000563739 LYRM7Q5U5X0 104 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms