RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 ESRGQ1W209 222 aa8.63□□□□□ -1.03
CCDC187-201ENST00000563590 COX17Q14061 63 aa8.62□□□□□ -1.03
CCDC187-201ENST00000563590 LOC110117498A0A087WWA1 95 aa8.61□□□□□ -1.03
CCDC187-201ENST00000563590 C16orf95Q9H693 158 aa8.6□□□□□ -1.03
CCDC187-201ENST00000563590 KIAA0087Q14695 138 aa8.59□□□□□ -1.03
CCDC187-201ENST00000563590 CSNK1G2-AS1Q8NCQ2 148 aa8.59□□□□□ -1.03
CCDC187-201ENST00000563590 ATP5EP56381 51 aaPredicted RBP8.59□□□□□ -1.03
CCDC187-201ENST00000563590 CMC4P56277 68 aaPredicted RBP8.58□□□□□ -1.04
CCDC187-201ENST00000563590 SMIM29Q86T20 159 aa8.58□□□□□ -1.04
CCDC187-201ENST00000563590 KRTAP10-3P60369 221 aa8.58□□□□□ -1.04
CCDC187-201ENST00000563590 DEFB116Q30KQ4 102 aa8.58□□□□□ -1.04
CCDC187-201ENST00000563590 TENM3Q9P273 2699 aa8.58□□□□□ -1.04
CCDC187-201ENST00000563590 TRBV7-4A0A0J9YYF1 115 aa8.57□□□□□ -1.04
CCDC187-201ENST00000563590 C9orf66Q5T8R8 295 aa8.57□□□□□ -1.04
CCDC187-201ENST00000563590 NKAPP1Q8N9T2 125 aa8.57□□□□□ -1.04
CCDC187-201ENST00000563590 SPTSSBQ8NFR3 76 aa8.57□□□□□ -1.04
CCDC187-201ENST00000563590 C19orf73Q9NVV2 129 aa8.57□□□□□ -1.04
CCDC187-201ENST00000563590 A0A1B0GUV1 79 aa8.57□□□□□ -1.04
CCDC187-201ENST00000563590 SPART-AS1P0CW21 52 aa8.56□□□□□ -1.04
CCDC187-201ENST00000563590 IGHV4-30-4P0DP06 118 aa8.55□□□□□ -1.04
CCDC187-201ENST00000563590 APOC4P55056 127 aa8.55□□□□□ -1.04
CCDC187-201ENST00000563590 TRRAPQ9Y4A5 3859 aa8.54□□□□□ -1.04
CCDC187-201ENST00000563590 STAB2Q8WWQ8 2551 aa8.54□□□□□ -1.04
CCDC187-201ENST00000563590 BCE1O60756 84 aa8.54□□□□□ -1.04
CCDC187-201ENST00000563590 RPL37AP8A6NKH3 93 aa8.53□□□□□ -1.04
CCDC187-201ENST00000563590 WFDC13Q8IUB5 93 aa8.53□□□□□ -1.04
CCDC187-201ENST00000563590 C6orf48Q9UBA6 75 aa8.53□□□□□ -1.04
CCDC187-201ENST00000563590 IGLV6-57P01721 117 aa8.52□□□□□ -1.05
CCDC187-201ENST00000563590 IGKV4-1P06312 121 aa8.51□□□□□ -1.05
CCDC187-201ENST00000563590 WFDC10BQ8IUB3 73 aa8.51□□□□□ -1.05
CCDC187-201ENST00000563590 F8WDY8 70 aa8.5□□□□□ -1.05
CCDC187-201ENST00000563590 Q6ZTC4 211 aa8.5□□□□□ -1.05
CCDC187-201ENST00000563590 PMAIP1Q13794 54 aa8.5□□□□□ -1.05
CCDC187-201ENST00000563590 KRTAP24-1Q3LI83 254 aa8.5□□□□□ -1.05
CCDC187-201ENST00000563590 X6R8D5 127 aa8.5□□□□□ -1.05
CCDC187-201ENST00000563590 H3BQ85 93 aa8.49□□□□□ -1.05
CCDC187-201ENST00000563590 EPM2AB3EWF7 344 aa8.48□□□□□ -1.05
CCDC187-201ENST00000563590 UBE2BP63146 152 aa8.48□□□□□ -1.05
CCDC187-201ENST00000563590 A0A0J9YWU9 116 aa8.48□□□□□ -1.05
CCDC187-201ENST00000563590 IGKV2-24A0A0C4DH68 120 aa8.47□□□□□ -1.05
CCDC187-201ENST00000563590 KPRPQ5T749 579 aaPredicted RBP8.47□□□□□ -1.05
CCDC187-201ENST00000563590 M0R378 163 aa8.47□□□□□ -1.05
CCDC187-201ENST00000563590 C1orf64Q8NEQ6 169 aa8.47□□□□□ -1.05
CCDC187-201ENST00000563590 TENM2Q9NT68 2774 aa8.47□□□□□ -1.05
CCDC187-201ENST00000563590 A0A096LNI7 61 aa8.47□□□□□ -1.05
CCDC187-201ENST00000563590 ETDCA0A1B0GVM5 59 aa8.47□□□□□ -1.05
CCDC187-201ENST00000563590 ELOF1P60002 83 aaKnown RBP8.47□□□□□ -1.05
CCDC187-201ENST00000563590 Q6ZRU5 148 aa8.46□□□□□ -1.05
CCDC187-201ENST00000563590 LINC00612Q8N6U2 182 aa8.46□□□□□ -1.06
CCDC187-201ENST00000563590 A0A0G2JQZ4 141 aa8.46□□□□□ -1.06
CCDC187-201ENST00000563590 A0A1W2PNN7 141 aa8.46□□□□□ -1.06
CCDC187-201ENST00000563590 CHKB-CPT1BH3BT56 60 aa8.45□□□□□ -1.06
CCDC187-201ENST00000563590 A8MUN3 132 aa8.45□□□□□ -1.06
CCDC187-201ENST00000563590 OCR1Q9BZK8 76 aa8.45□□□□□ -1.06
CCDC187-201ENST00000563590 C1orf137Q5JT78 98 aa8.44□□□□□ -1.06
CCDC187-201ENST00000563590 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.43□□□□□ -1.06
CCDC187-201ENST00000563590 DEFB131BA0A096LNP1 70 aa8.43□□□□□ -1.06
CCDC187-201ENST00000563590 LINC00208Q96KT6 92 aa8.43□□□□□ -1.06
CCDC187-201ENST00000563590 MP68P56378 58 aa8.42□□□□□ -1.06
CCDC187-201ENST00000563590 LELP1Q5T871 98 aa8.41□□□□□ -1.06
CCDC187-201ENST00000563590 ST20-AS1Q8NBB2 130 aa8.41□□□□□ -1.06
CCDC187-201ENST00000563590 PSCAO43653 123 aa8.41□□□□□ -1.06
CCDC187-201ENST00000563590 LYRM9A8MSI8 78 aa8.4□□□□□ -1.06
CCDC187-201ENST00000563590 K7EQZ3 153 aa8.4□□□□□ -1.06
CCDC187-201ENST00000563590 VPREB1P12018 145 aa8.4□□□□□ -1.06
CCDC187-201ENST00000563590 C11orf45Q8TAV5 145 aa8.4□□□□□ -1.07
CCDC187-201ENST00000563590 TRAV22A0A0B4J277 110 aa8.39□□□□□ -1.07
CCDC187-201ENST00000563590 Q6ZRP5 223 aa8.38□□□□□ -1.07
CCDC187-201ENST00000563590 LINC00528Q8N1L1 170 aa8.38□□□□□ -1.07
CCDC187-201ENST00000563590 PRR15LQ9BU68 103 aa8.38□□□□□ -1.07
CCDC187-201ENST00000563590 hDV103S1A0JD37 113 aa8.38□□□□□ -1.07
CCDC187-201ENST00000563590 ERC2-IT1O76042 136 aa8.37□□□□□ -1.07
CCDC187-201ENST00000563590 MRPL55Q7Z7F7 128 aaKnown RBP8.37□□□□□ -1.07
CCDC187-201ENST00000563590 UBE2DNLQ8IWF7 75 aa8.37□□□□□ -1.07
CCDC187-201ENST00000563590 SYCNQ0VAF6 134 aa8.37□□□□□ -1.07
CCDC187-201ENST00000563590 A6NED7 52 aa8.36□□□□□ -1.07
CCDC187-201ENST00000563590 EGFEM1PQ0D2K5 195 aa8.36□□□□□ -1.07
CCDC187-201ENST00000563590 Q8N377 158 aa8.36□□□□□ -1.07
CCDC187-201ENST00000563590 A8MU10 97 aa8.35□□□□□ -1.07
CCDC187-201ENST00000563590 C7orf33Q8WU49 177 aa8.35□□□□□ -1.07
CCDC187-201ENST00000563590 RPL37AP61513 92 aaKnown RBP8.34□□□□□ -1.07
CCDC187-201ENST00000563590 A0A1W2PNM2 257 aa8.33□□□□□ -1.08
CCDC187-201ENST00000563590 SERTAD4-AS1Q5TG53 156 aa8.33□□□□□ -1.08
CCDC187-201ENST00000563590 HCG22E2RYF7 251 aa8.33□□□□□ -1.08
CCDC187-201ENST00000563590 FAM168BA1KXE4 195 aa8.32□□□□□ -1.08
CCDC187-201ENST00000563590 Q8NAQ8 132 aa8.32□□□□□ -1.08
CCDC187-201ENST00000563590 A0A087WSZ3 146 aa8.32□□□□□ -1.08
CCDC187-201ENST00000563590 GVQW2A0A096LPI5 108 aaPredicted RBP8.32□□□□□ -1.08
CCDC187-201ENST00000563590 PRR34Q9NV39 138 aa8.31□□□□□ -1.08
CCDC187-201ENST00000563590 B9D2Q9BPU9 175 aa8.3□□□□□ -1.08
CCDC187-201ENST00000563590 H0Y9J4 135 aa8.29□□□□□ -1.08
CCDC187-201ENST00000563590 KRTAP10-11P60412 298 aa8.29□□□□□ -1.08
CCDC187-201ENST00000563590 PCOTHQ58A44 107 aa8.29□□□□□ -1.08
CCDC187-201ENST00000563590 PRR15Q8IV56 129 aa8.29□□□□□ -1.08
CCDC187-201ENST00000563590 Q8NBF4 154 aa8.29□□□□□ -1.08
CCDC187-201ENST00000563590 DHRS4-AS1Q9P1J3 65 aa8.28□□□□□ -1.08
CCDC187-201ENST00000563590 ANK3Q12955 4377 aaKnown RBP8.28□□□□□ -1.08
CCDC187-201ENST00000563590 NDUFB1O75438 58 aa8.27□□□□□ -1.09
CCDC187-201ENST00000563590 CSMD3Q7Z407 3707 aa8.27□□□□□ -1.09
CCDC187-201ENST00000563590 H0Y9P7 68 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms