RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 DPH3Q96FX2 82 aa6.41□□□□□ -1.38
SMG1-208ENST00000563448 LINC00167Q96N53 147 aa6.41□□□□□ -1.38
SMG1-208ENST00000563448 A0A087WYN8 130 aa6.4□□□□□ -1.38
SMG1-208ENST00000563448 FAM30AQ9NZY2 134 aa6.4□□□□□ -1.38
SMG1-208ENST00000563448 PRO0461Q9UI25 63 aa6.4□□□□□ -1.38
SMG1-208ENST00000563448 RPL28P46779 137 aaKnown RBP6.4□□□□□ -1.39
SMG1-208ENST00000563448 ETDBQ3ZM63 59 aa6.4□□□□□ -1.39
SMG1-208ENST00000563448 PHF5AQ7RTV0 110 aaKnown RBP6.4□□□□□ -1.39
SMG1-208ENST00000563448 IGLV1-50A0A075B6I6 118 aa6.39□□□□□ -1.39
SMG1-208ENST00000563448 TRBV20-1A0A075B6N2 111 aa6.39□□□□□ -1.39
SMG1-208ENST00000563448 RPL37AP8A6NKH3 93 aa6.39□□□□□ -1.39
SMG1-208ENST00000563448 TRIAP1O43715 76 aa6.39□□□□□ -1.39
SMG1-208ENST00000563448 PSMB2P49721 201 aa6.39□□□□□ -1.39
SMG1-208ENST00000563448 TRAV23DV6A0A075B6W5 121 aa6.38□□□□□ -1.39
SMG1-208ENST00000563448 Q6ZSA8 131 aa6.38□□□□□ -1.39
SMG1-208ENST00000563448 PLAC8Q9NZF1 115 aa6.38□□□□□ -1.39
SMG1-208ENST00000563448 PPDPFLQ8WWR9 84 aa6.37□□□□□ -1.39
SMG1-208ENST00000563448 KCNQ1DNQ9H478 68 aa6.37□□□□□ -1.39
SMG1-208ENST00000563448 KRTAP11-1Q8IUC1 163 aa6.37□□□□□ -1.39
SMG1-208ENST00000563448 C6orf99Q4VX62 202 aa6.36□□□□□ -1.39
SMG1-208ENST00000563448 PRYO14603 147 aa6.35□□□□□ -1.39
SMG1-208ENST00000563448 ZNF73O43830 326 aaPredicted RBP6.35□□□□□ -1.39
SMG1-208ENST00000563448 SCGB1C2P0DMR2 95 aa6.35□□□□□ -1.39
SMG1-208ENST00000563448 TEN1Q86WV5 123 aa6.35□□□□□ -1.39
SMG1-208ENST00000563448 CIRBP-AS1Q8TBR5 109 aa6.35□□□□□ -1.39
SMG1-208ENST00000563448 COX6CP09669 75 aa6.34□□□□□ -1.39
SMG1-208ENST00000563448 UBE2BP63146 152 aa6.34□□□□□ -1.39
SMG1-208ENST00000563448 SCXQ7RTU7 201 aa6.34□□□□□ -1.39
SMG1-208ENST00000563448 DIRC1Q969H9 104 aa6.34□□□□□ -1.39
SMG1-208ENST00000563448 TCL1BO95988 128 aa6.33□□□□□ -1.4
SMG1-208ENST00000563448 SPRR1AP35321 89 aa6.33□□□□□ -1.4
SMG1-208ENST00000563448 HAMPP81172 84 aa6.33□□□□□ -1.4
SMG1-208ENST00000563448 CLEC2BQ92478 149 aa6.33□□□□□ -1.4
SMG1-208ENST00000563448 PKHD1P08F94 4074 aa6.33□□□□□ -1.4
SMG1-208ENST00000563448 KRTAP4-16G5E9R7 235 aaPredicted RBP6.33□□□□□ -1.4
SMG1-208ENST00000563448 REG3GQ6UW15 175 aa6.33□□□□□ -1.4
SMG1-208ENST00000563448 FAM218AQ96MZ4 157 aa6.33□□□□□ -1.4
SMG1-208ENST00000563448 CDIP1Q9H305 208 aa6.33□□□□□ -1.4
SMG1-208ENST00000563448 DYNC1H1Q14204 4646 aaKnown RBP6.33□□□□□ -1.4
SMG1-208ENST00000563448 H0YGX0 51 aa6.32□□□□□ -1.4
SMG1-208ENST00000563448 LRP1BQ9NZR2 4599 aa6.31□□□□□ -1.4
SMG1-208ENST00000563448 TRBV7-6A0A0J9YX20 115 aa6.31□□□□□ -1.4
SMG1-208ENST00000563448 COX7BP24311 80 aa6.31□□□□□ -1.4
SMG1-208ENST00000563448 ELOF1P60002 83 aaKnown RBP6.31□□□□□ -1.4
SMG1-208ENST00000563448 LINC01600Q96MT4 127 aa6.31□□□□□ -1.4
SMG1-208ENST00000563448 LST1O00453 97 aa6.3□□□□□ -1.4
SMG1-208ENST00000563448 B5MCH6 92 aa6.3□□□□□ -1.4
SMG1-208ENST00000563448 LINC00528Q8N1L1 170 aa6.3□□□□□ -1.4
SMG1-208ENST00000563448 EPPK1P58107 5090 aaKnown RBP6.29□□□□□ -1.4
SMG1-208ENST00000563448 ETDCA0A1B0GVM5 59 aa6.29□□□□□ -1.4
SMG1-208ENST00000563448 SMCPP49901 116 aaPredicted RBP6.29□□□□□ -1.4
SMG1-208ENST00000563448 ATXN8Q156A1 80 aa6.29□□□□□ -1.4
SMG1-208ENST00000563448 Q6Q795 121 aa6.29□□□□□ -1.4
SMG1-208ENST00000563448 LINC00575Q6W349 94 aa6.29□□□□□ -1.4
SMG1-208ENST00000563448 XGP55808 180 aa6.28□□□□□ -1.4
SMG1-208ENST00000563448 ANAPC13Q9BS18 74 aa6.28□□□□□ -1.4
SMG1-208ENST00000563448 PSORS1C2Q9UIG4 136 aa6.28□□□□□ -1.4
SMG1-208ENST00000563448 Q6ZRX8 168 aa6.28□□□□□ -1.4
SMG1-208ENST00000563448 FAM19A1Q7Z5A9 133 aa6.28□□□□□ -1.4
SMG1-208ENST00000563448 MT-ATP8P03928 68 aa6.27□□□□□ -1.41
SMG1-208ENST00000563448 TRACP01848 142 aa6.26□□□□□ -1.41
SMG1-208ENST00000563448 PRLHP81277 87 aa6.26□□□□□ -1.41
SMG1-208ENST00000563448 Q9BRP9 147 aa6.26□□□□□ -1.41
SMG1-208ENST00000563448 BIRC6Q9NR09 4857 aa6.26□□□□□ -1.41
SMG1-208ENST00000563448 A0A1B0GX51 115 aa6.26□□□□□ -1.41
SMG1-208ENST00000563448 hADV29S1A0JD25 119 aa6.26□□□□□ -1.41
SMG1-208ENST00000563448 BCE1O60756 84 aa6.26□□□□□ -1.41
SMG1-208ENST00000563448 SNCGO76070 127 aa6.25□□□□□ -1.41
SMG1-208ENST00000563448 C1orf137Q5JT78 98 aa6.25□□□□□ -1.41
SMG1-208ENST00000563448 SLC25A20O43772 301 aa6.25□□□□□ -1.41
SMG1-208ENST00000563448 INAFM2P0DMQ5 153 aa6.25□□□□□ -1.41
SMG1-208ENST00000563448 KRTAP13-1Q8IUC0 172 aa6.25□□□□□ -1.41
SMG1-208ENST00000563448 SMCR5Q8TEV8 140 aa6.25□□□□□ -1.41
SMG1-208ENST00000563448 APOBP04114 4563 aaKnown RBP6.25□□□□□ -1.41
SMG1-208ENST00000563448 H0Y9J4 135 aa6.24□□□□□ -1.41
SMG1-208ENST00000563448 ANKRD29Q8N6D5 301 aa6.24□□□□□ -1.41
SMG1-208ENST00000563448 DHRS4-AS1Q9P1J3 65 aa6.24□□□□□ -1.41
SMG1-208ENST00000563448 C9JAW5 83 aa6.23□□□□□ -1.41
SMG1-208ENST00000563448 UBE2AP49459 152 aa6.23□□□□□ -1.41
SMG1-208ENST00000563448 ERC2-IT1O76042 136 aa6.23□□□□□ -1.41
SMG1-208ENST00000563448 DNAL4O96015 105 aa6.23□□□□□ -1.41
SMG1-208ENST00000563448 FAM240AA0A1B0GVK7 77 aa6.21□□□□□ -1.41
SMG1-208ENST00000563448 IGLV7-43P04211 117 aa6.21□□□□□ -1.41
SMG1-208ENST00000563448 NDUFV3P56181 108 aaKnown RBP6.21□□□□□ -1.41
SMG1-208ENST00000563448 Q6ZQY7 126 aa6.21□□□□□ -1.41
SMG1-208ENST00000563448 HIGD2AQ9BW72 106 aa6.21□□□□□ -1.41
SMG1-208ENST00000563448 SS18L2Q9UHA2 77 aa6.21□□□□□ -1.41
SMG1-208ENST00000563448 SMR3BP02814 79 aaPredicted RBP6.21□□□□□ -1.42
SMG1-208ENST00000563448 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.21□□□□□ -1.42
SMG1-208ENST00000563448 ST20-AS1Q8NBB2 130 aa6.2□□□□□ -1.42
SMG1-208ENST00000563448 ORMDL1Q9P0S3 153 aa6.2□□□□□ -1.42
SMG1-208ENST00000563448 H3BT86 120 aa6.2□□□□□ -1.42
SMG1-208ENST00000563448 ZNF861PO60384 105 aa6.2□□□□□ -1.42
SMG1-208ENST00000563448 BAALC-AS2P0C853 105 aa6.2□□□□□ -1.42
SMG1-208ENST00000563448 CDK2AP2O75956 126 aa6.18□□□□□ -1.42
SMG1-208ENST00000563448 LINC01547P58512 204 aaPredicted RBP6.18□□□□□ -1.42
SMG1-208ENST00000563448 ACYP1P07311 99 aa6.18□□□□□ -1.42
SMG1-208ENST00000563448 IMUPQ9GZP8 106 aa6.18□□□□□ -1.42
SMG1-208ENST00000563448 VPS13BQ7Z7G8 4022 aa6.17□□□□□ -1.42
SMG1-208ENST00000563448 RPL37AP61513 92 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms