RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 TTTY12Q9BZ98 90 aa2.92□□□□□ -1.94
SMG1-207ENST00000563235 BSNQ9UPA5 3926 aa2.92□□□□□ -1.94
SMG1-207ENST00000563235 DEFB108AA8MXU0 73 aa2.92□□□□□ -1.94
SMG1-207ENST00000563235 ZNF861PO60384 105 aa2.92□□□□□ -1.94
SMG1-207ENST00000563235 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
SMG1-207ENST00000563235 APCP25054 2843 aa2.92□□□□□ -1.94
SMG1-207ENST00000563235 SPAG11BQ08648 103 aa2.91□□□□□ -1.94
SMG1-207ENST00000563235 SPAG11AQ6PDA7 123 aa2.91□□□□□ -1.94
SMG1-207ENST00000563235 ORMDL1Q9P0S3 153 aa2.91□□□□□ -1.94
SMG1-207ENST00000563235 IGKV3-7A0A075B6H7 116 aa2.91□□□□□ -1.94
SMG1-207ENST00000563235 LINC00846Q9NV44 126 aa2.91□□□□□ -1.94
SMG1-207ENST00000563235 TRBV6-5A0A0K0K1A5 114 aa2.9□□□□□ -1.94
SMG1-207ENST00000563235 CNBPP62633 177 aaKnown RBP2.9□□□□□ -1.94
SMG1-207ENST00000563235 U3KQA8 63 aa2.9□□□□□ -1.94
SMG1-207ENST00000563235 LAMA1P25391 3075 aa2.9□□□□□ -1.95
SMG1-207ENST00000563235 I3L2K1 104 aa2.9□□□□□ -1.95
SMG1-207ENST00000563235 POLR2KP53803 58 aaKnown RBP2.9□□□□□ -1.95
SMG1-207ENST00000563235 CELSR2Q9HCU4 2923 aa2.9□□□□□ -1.95
SMG1-207ENST00000563235 MGAQ8IWI9 3026 aa2.9□□□□□ -1.95
SMG1-207ENST00000563235 DNAL4O96015 105 aa2.89□□□□□ -1.95
SMG1-207ENST00000563235 PRR14LQ5THK1 2151 aa2.89□□□□□ -1.95
SMG1-207ENST00000563235 ADGRG4Q8IZF6 3080 aa2.89□□□□□ -1.95
SMG1-207ENST00000563235 M0R1W7 72 aa2.89□□□□□ -1.95
SMG1-207ENST00000563235 ATRQ13535 2644 aa2.89□□□□□ -1.95
SMG1-207ENST00000563235 ST20-AS1Q8NBB2 130 aa2.89□□□□□ -1.95
SMG1-207ENST00000563235 CELSR3Q9NYQ7 3312 aa2.89□□□□□ -1.95
SMG1-207ENST00000563235 ELOF1P60002 83 aaKnown RBP2.89□□□□□ -1.95
SMG1-207ENST00000563235 LENEPQ9Y5L5 61 aa2.89□□□□□ -1.95
SMG1-207ENST00000563235 NBASA2RRP1 2371 aa2.89□□□□□ -1.95
SMG1-207ENST00000563235 CNTRLQ7Z7A1 2325 aa2.89□□□□□ -1.95
SMG1-207ENST00000563235 BIRC6Q9NR09 4857 aa2.88□□□□□ -1.95
SMG1-207ENST00000563235 ANK2Q01484 3957 aa2.88□□□□□ -1.95
SMG1-207ENST00000563235 IGKV2-40A0A087WW87 121 aaPredicted RBP2.88□□□□□ -1.95
SMG1-207ENST00000563235 NUPR2A6NF83 97 aa2.88□□□□□ -1.95
SMG1-207ENST00000563235 IGKV2D-40P01614 121 aaPredicted RBP2.88□□□□□ -1.95
SMG1-207ENST00000563235 C1orf137Q5JT78 98 aa2.88□□□□□ -1.95
SMG1-207ENST00000563235 CELSR1Q9NYQ6 3014 aa2.88□□□□□ -1.95
SMG1-207ENST00000563235 CTSGP08311 255 aa2.88□□□□□ -1.95
SMG1-207ENST00000563235 LINC00315P59091 139 aa2.88□□□□□ -1.95
SMG1-207ENST00000563235 KPRPQ5T749 579 aaPredicted RBP2.87□□□□□ -1.95
SMG1-207ENST00000563235 LINC00612Q8N6U2 182 aa2.87□□□□□ -1.95
SMG1-207ENST00000563235 JMJD1CQ15652 2540 aa2.87□□□□□ -1.95
SMG1-207ENST00000563235 RTTNQ86VV8 2226 aa2.87□□□□□ -1.95
SMG1-207ENST00000563235 NDUFA1O15239 70 aa2.87□□□□□ -1.95
SMG1-207ENST00000563235 IGKV3-20P01619 116 aa2.87□□□□□ -1.95
SMG1-207ENST00000563235 RPL39LQ96EH5 51 aaKnown RBP2.87□□□□□ -1.95
SMG1-207ENST00000563235 DMAC1Q96GE9 116 aa2.87□□□□□ -1.95
SMG1-207ENST00000563235 CENPEQ02224 2701 aa2.87□□□□□ -1.95
SMG1-207ENST00000563235 PRRC2AP48634 2157 aaKnown RBP2.86□□□□□ -1.95
SMG1-207ENST00000563235 IGKV3OR2-268A0A0C4DH90 116 aa2.86□□□□□ -1.95
SMG1-207ENST00000563235 K7EIM0 57 aa2.86□□□□□ -1.95
SMG1-207ENST00000563235 MRPL33O75394 65 aaKnown RBP2.86□□□□□ -1.95
SMG1-207ENST00000563235 C10orf55Q5SWW7 151 aa2.86□□□□□ -1.95
SMG1-207ENST00000563235 NIPBLQ6KC79 2804 aaeCLIP2.86□□□□□ -1.95
SMG1-207ENST00000563235 KRTAP15-1Q3LI76 137 aa2.86□□□□□ -1.95
SMG1-207ENST00000563235 NBEAL1Q6ZS30 2694 aa2.86□□□□□ -1.95
SMG1-207ENST00000563235 CSMD1Q96PZ7 3565 aa2.86□□□□□ -1.95
SMG1-207ENST00000563235 SPINK7P58062 85 aa2.86□□□□□ -1.95
SMG1-207ENST00000563235 KLK9Q2XQG4 91 aa2.86□□□□□ -1.95
SMG1-207ENST00000563235 LINC00308Q8TCZ7 52 aa2.86□□□□□ -1.95
SMG1-207ENST00000563235 ZNF625Q96I27 306 aaPredicted RBP2.86□□□□□ -1.95
SMG1-207ENST00000563235 KLK9Q9UKQ9 250 aa2.86□□□□□ -1.95
SMG1-207ENST00000563235 ENHOQ6UWT2 76 aa2.85□□□□□ -1.95
SMG1-207ENST00000563235 LINC01558Q9Y6Z2 57 aa2.85□□□□□ -1.95
SMG1-207ENST00000563235 FAM74A4Q5TZK3 123 aa2.85□□□□□ -1.95
SMG1-207ENST00000563235 HCP5Q6MZN7 132 aa2.85□□□□□ -1.95
SMG1-207ENST00000563235 LEAP2Q969E1 77 aa2.85□□□□□ -1.95
SMG1-207ENST00000563235 R4GN34 69 aa2.85□□□□□ -1.95
SMG1-207ENST00000563235 TNCP24821 2201 aa2.85□□□□□ -1.95
SMG1-207ENST00000563235 H0YGX0 51 aa2.84□□□□□ -1.95
SMG1-207ENST00000563235 RPL39P62891 51 aaKnown RBP2.84□□□□□ -1.95
SMG1-207ENST00000563235 NREPQ16612 68 aa2.84□□□□□ -1.95
SMG1-207ENST00000563235 PLAC8Q9NZF1 115 aa2.84□□□□□ -1.95
SMG1-207ENST00000563235 CSPG4Q6UVK1 2322 aa2.84□□□□□ -1.95
SMG1-207ENST00000563235 JMJD7-PLA2G4BH0Y9G9 81 aa2.84□□□□□ -1.96
SMG1-207ENST00000563235 WFDC9Q8NEX5 89 aa2.84□□□□□ -1.96
SMG1-207ENST00000563235 COX7B2Q8TF08 81 aa2.84□□□□□ -1.96
SMG1-207ENST00000563235 STAB1Q9NY15 2570 aa2.83□□□□□ -1.96
SMG1-207ENST00000563235 LCE6AA0A183 80 aa2.83□□□□□ -1.96
SMG1-207ENST00000563235 CCL3L1P16619 93 aa2.83□□□□□ -1.96
SMG1-207ENST00000563235 KRTAP10-2P60368 255 aa2.83□□□□□ -1.96
SMG1-207ENST00000563235 GAFA1Q96PS6 74 aa2.83□□□□□ -1.96
SMG1-207ENST00000563235 CRYBG3Q68DQ2 2970 aa2.83□□□□□ -1.96
SMG1-207ENST00000563235 LOC110117498A0A087WWA1 95 aa2.82□□□□□ -1.96
SMG1-207ENST00000563235 IGKV3-15P01624 115 aa2.82□□□□□ -1.96
SMG1-207ENST00000563235 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.82□□□□□ -1.96
SMG1-207ENST00000563235 CCDC168Q8NDH2 2452 aa2.82□□□□□ -1.96
SMG1-207ENST00000563235 BOD1L1Q8NFC6 3051 aa2.82□□□□□ -1.96
SMG1-207ENST00000563235 RNASE3P12724 160 aaKnown RBP2.82□□□□□ -1.96
SMG1-207ENST00000563235 CCL18P55774 89 aa2.82□□□□□ -1.96
SMG1-207ENST00000563235 Q9BRP9 147 aa2.82□□□□□ -1.96
SMG1-207ENST00000563235 NSD1Q96L73 2696 aaPredicted RBP2.82□□□□□ -1.96
SMG1-207ENST00000563235 KRTAP24-1Q3LI83 254 aa2.82□□□□□ -1.96
SMG1-207ENST00000563235 UBL5Q9BZL1 73 aa2.82□□□□□ -1.96
SMG1-207ENST00000563235 TRAV21A0A0B4J279 112 aa2.81□□□□□ -1.96
SMG1-207ENST00000563235 IGKV2-29A2NJV5 120 aaPredicted RBP2.81□□□□□ -1.96
SMG1-207ENST00000563235 PRR9Q5T870 116 aa2.81□□□□□ -1.96
SMG1-207ENST00000563235 COL6A5A8TX70 2615 aa2.81□□□□□ -1.96
SMG1-207ENST00000563235 A0A087WYN8 130 aa2.81□□□□□ -1.96
SMG1-207ENST00000563235 RYR3Q15413 4870 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms