RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 CACNA1BQ00975 2339 aa1.04□□□□□ -2.24
SHCBP1-202ENST00000563219 COL6A6A6NMZ7 2263 aa1.03□□□□□ -2.24
SHCBP1-202ENST00000563219 DEFB131BA0A096LNP1 70 aa1.03□□□□□ -2.24
SHCBP1-202ENST00000563219 SPINK13Q1W4C9 94 aa1.03□□□□□ -2.24
SHCBP1-202ENST00000563219 LRRC37AA6NMS7 1700 aa1.03□□□□□ -2.24
SHCBP1-202ENST00000563219 LY6G6CO95867 125 aa1.02□□□□□ -2.25
SHCBP1-202ENST00000563219 LINC00158P58513 81 aa1.02□□□□□ -2.25
SHCBP1-202ENST00000563219 C10orf99Q6UWK7 81 aa1.02□□□□□ -2.25
SHCBP1-202ENST00000563219 SMIM2Q9BVW6 85 aa1.02□□□□□ -2.25
SHCBP1-202ENST00000563219 CRIPTQ9P021 101 aa1.02□□□□□ -2.25
SHCBP1-202ENST00000563219 KMT2BQ9UMN6 2715 aaPredicted RBP1.02□□□□□ -2.25
SHCBP1-202ENST00000563219 GVQW2A0A096LPI5 108 aaPredicted RBP1.01□□□□□ -2.25
SHCBP1-202ENST00000563219 G3V318 75 aa1.01□□□□□ -2.25
SHCBP1-202ENST00000563219 IAPPP10997 89 aa1.01□□□□□ -2.25
SHCBP1-202ENST00000563219 CRIP1P50238 77 aa1.01□□□□□ -2.25
SHCBP1-202ENST00000563219 UBE2DNLQ8IWF7 75 aa1.01□□□□□ -2.25
SHCBP1-202ENST00000563219 LINC00308Q8TCZ7 52 aa1.01□□□□□ -2.25
SHCBP1-202ENST00000563219 DNAJC13O75165 2243 aa1.01□□□□□ -2.25
SHCBP1-202ENST00000563219 KIAA0100Q14667 2235 aaKnown RBP1.01□□□□□ -2.25
SHCBP1-202ENST00000563219 TFF3Q07654 80 aa1□□□□□ -2.25
SHCBP1-202ENST00000563219 Q8IZM0 81 aa1□□□□□ -2.25
SHCBP1-202ENST00000563219 USMG5Q96IX5 58 aa1□□□□□ -2.25
SHCBP1-202ENST00000563219 CDKN2A-AS1Q9UH64 79 aa1□□□□□ -2.25
SHCBP1-202ENST00000563219 SPAG17Q6Q759 2223 aa0.99□□□□□ -2.25
SHCBP1-202ENST00000563219 A0A096LNT2 108 aa0.99□□□□□ -2.25
SHCBP1-202ENST00000563219 NDUFA1O15239 70 aa0.99□□□□□ -2.25
SHCBP1-202ENST00000563219 TENM1Q9UKZ4 2725 aa0.99□□□□□ -2.25
SHCBP1-202ENST00000563219 ROS1P08922 2347 aa0.98□□□□□ -2.25
SHCBP1-202ENST00000563219 PRB3Q04118 309 aaPredicted RBP0.98□□□□□ -2.25
SHCBP1-202ENST00000563219 LINC00575Q6W349 94 aa0.98□□□□□ -2.25
SHCBP1-202ENST00000563219 ARHGAP5-AS1Q96IT6 56 aa0.98□□□□□ -2.25
SHCBP1-202ENST00000563219 CNFNQ9BYD5 112 aa0.98□□□□□ -2.25
SHCBP1-202ENST00000563219 TP53AIP1Q9HCN2 124 aa0.98□□□□□ -2.25
SHCBP1-202ENST00000563219 TNRC6CQ9HCJ0 1690 aaKnown RBP0.97□□□□□ -2.25
SHCBP1-202ENST00000563219 FLG2Q5D862 2391 aaPredicted RBP0.97□□□□□ -2.25
SHCBP1-202ENST00000563219 SSC5DA1L4H1 1573 aa0.97□□□□□ -2.25
SHCBP1-202ENST00000563219 PIGYQ3MUY2 71 aa0.97□□□□□ -2.25
SHCBP1-202ENST00000563219 MINOS1Q5TGZ0 78 aa0.97□□□□□ -2.25
SHCBP1-202ENST00000563219 COX6B2Q6YFQ2 88 aa0.97□□□□□ -2.25
SHCBP1-202ENST00000563219 PRO3102Q9H379 93 aa0.97□□□□□ -2.25
SHCBP1-202ENST00000563219 LYNX1G3V0Z9 82 aa0.96□□□□□ -2.26
SHCBP1-202ENST00000563219 K7EQZ3 153 aa0.96□□□□□ -2.26
SHCBP1-202ENST00000563219 CCL22O00626 93 aa0.96□□□□□ -2.26
SHCBP1-202ENST00000563219 RPL37P61927 97 aaKnown RBP0.96□□□□□ -2.26
SHCBP1-202ENST00000563219 RPS27LQ71UM5 84 aaKnown RBP0.96□□□□□ -2.26
SHCBP1-202ENST00000563219 MRPL34Q9BQ48 92 aaKnown RBP0.96□□□□□ -2.26
SHCBP1-202ENST00000563219 TTTY10Q9BZA0 68 aa0.96□□□□□ -2.26
SHCBP1-202ENST00000563219 C6orf48Q9UBA6 75 aa0.96□□□□□ -2.26
SHCBP1-202ENST00000563219 ABCA4P78363 2273 aa0.96□□□□□ -2.26
SHCBP1-202ENST00000563219 LOC730098B7Z3J9 87 aa0.94□□□□□ -2.26
SHCBP1-202ENST00000563219 TNCP24821 2201 aa0.94□□□□□ -2.26
SHCBP1-202ENST00000563219 WFDC10BQ8IUB3 73 aa0.93□□□□□ -2.26
SHCBP1-202ENST00000563219 MED13LQ71F56 2210 aa0.92□□□□□ -2.26
SHCBP1-202ENST00000563219 H3BSH0 61 aa0.92□□□□□ -2.26
SHCBP1-202ENST00000563219 WFDC13Q8IUB5 93 aa0.92□□□□□ -2.26
SHCBP1-202ENST00000563219 BPTFQ12830 3046 aa0.91□□□□□ -2.26
SHCBP1-202ENST00000563219 POLR2KP53803 58 aaKnown RBP0.91□□□□□ -2.26
SHCBP1-202ENST00000563219 RPL39P62891 51 aaKnown RBP0.91□□□□□ -2.26
SHCBP1-202ENST00000563219 LINC01590Q5TEZ4 76 aa0.91□□□□□ -2.26
SHCBP1-202ENST00000563219 DEFB123Q8N688 67 aa0.91□□□□□ -2.26
SHCBP1-202ENST00000563219 ASCC3Q8N3C0 2202 aaKnown RBP0.91□□□□□ -2.26
SHCBP1-202ENST00000563219 I3L2K1 104 aa0.9□□□□□ -2.27
SHCBP1-202ENST00000563219 COX6A2Q02221 97 aa0.9□□□□□ -2.27
SHCBP1-202ENST00000563219 KAAG1Q9UBP8 84 aa0.9□□□□□ -2.27
SHCBP1-202ENST00000563219 F5P12259 2224 aa0.9□□□□□ -2.27
SHCBP1-202ENST00000563219 CACNA1CQ13936 2221 aa0.9□□□□□ -2.27
SHCBP1-202ENST00000563219 H0YAA0 97 aa0.89□□□□□ -2.27
SHCBP1-202ENST00000563219 H1FX-AS1Q4G0G2 97 aa0.89□□□□□ -2.27
SHCBP1-202ENST00000563219 SPINK9Q5DT21 86 aa0.89□□□□□ -2.27
SHCBP1-202ENST00000563219 RPL39LQ96EH5 51 aaKnown RBP0.89□□□□□ -2.27
SHCBP1-202ENST00000563219 PRO0255Q9UI72 69 aa0.89□□□□□ -2.27
SHCBP1-202ENST00000563219 APLNQ9ULZ1 77 aa0.89□□□□□ -2.27
SHCBP1-202ENST00000563219 IGLV5-48A0A075B6I7 105 aa0.88□□□□□ -2.27
SHCBP1-202ENST00000563219 H3BUA1 57 aa0.88□□□□□ -2.27
SHCBP1-202ENST00000563219 DEFB130BP0DP73 79 aa0.88□□□□□ -2.27
SHCBP1-202ENST00000563219 DEFB130AP0DP74 79 aa0.88□□□□□ -2.27
SHCBP1-202ENST00000563219 DEFB131AP59861 70 aa0.88□□□□□ -2.27
SHCBP1-202ENST00000563219 PRCDQ00LT1 54 aa0.88□□□□□ -2.27
SHCBP1-202ENST00000563219 DEFB105AQ8NG35 78 aa0.88□□□□□ -2.27
SHCBP1-202ENST00000563219 C10orf95Q9H7T3 257 aa0.88□□□□□ -2.27
SHCBP1-202ENST00000563219 CNTRLQ7Z7A1 2325 aa0.87□□□□□ -2.27
SHCBP1-202ENST00000563219 K7EIL1 84 aa0.87□□□□□ -2.27
SHCBP1-202ENST00000563219 RPS27P42677 84 aaKnown RBP0.87□□□□□ -2.27
SHCBP1-202ENST00000563219 WT1-ASQ06250 92 aa0.87□□□□□ -2.27
SHCBP1-202ENST00000563219 LEAP2Q969E1 77 aa0.87□□□□□ -2.27
SHCBP1-202ENST00000563219 GOLGA4Q13439 2230 aaKnown RBP0.87□□□□□ -2.27
SHCBP1-202ENST00000563219 SPRR1AP35321 89 aa0.86□□□□□ -2.27
SHCBP1-202ENST00000563219 LELP1Q5T871 98 aa0.86□□□□□ -2.27
SHCBP1-202ENST00000563219 TOMM7Q9P0U1 55 aa0.86□□□□□ -2.27
SHCBP1-202ENST00000563219 URB1O60287 2271 aaKnown RBP0.86□□□□□ -2.27
SHCBP1-202ENST00000563219 CADP27708 2225 aa0.85□□□□□ -2.27
SHCBP1-202ENST00000563219 ALMS1Q8TCU4 4167 aa0.85□□□□□ -2.27
SHCBP1-202ENST00000563219 ANKRD17O75179 2603 aaKnown RBP0.85□□□□□ -2.27
SHCBP1-202ENST00000563219 PRLHP81277 87 aa0.85□□□□□ -2.27
SHCBP1-202ENST00000563219 ABCA1O95477 2261 aa0.85□□□□□ -2.27
SHCBP1-202ENST00000563219 ZDBF2Q9HCK1 2354 aa0.84□□□□□ -2.27
SHCBP1-202ENST00000563219 KNTC1P50748 2209 aa0.84□□□□□ -2.27
SHCBP1-202ENST00000563219 MMP24-AS1A0A0U1RRL7 71 aa0.84□□□□□ -2.27
SHCBP1-202ENST00000563219 M0QY20 66 aa0.84□□□□□ -2.27
SHCBP1-202ENST00000563219 DEFB109BQ30KR1 87 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms