RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 HIST1H2BKO60814 126 aa5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 HIST1H2BJP06899 126 aa5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 HIST1H2BOP23527 126 aa5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 HIST1H2BBP33778 126 aa5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 HIST1H2BDP58876 126 aa5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 NPC2P61916 151 aa5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 HIST1H2BCP62807 126 aa5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 HIST2H2BEQ16778 126 aa5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 LINC00337Q8N6G1 96 aa5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 HIST1H2BHQ93079 126 aa5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 HIST1H2BNQ99877 126 aa5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 HIST1H2BMQ99879 126 aa5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 SPANXB1Q9NS25 103 aaPredicted RBP5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 LRP2P98164 4655 aa5.46□□□□□ -1.54
CHRFAM7A-204ENST00000562729 E9PLD3 99 aa5.45□□□□□ -1.54
CHRFAM7A-204ENST00000562729 KRTAP13-2Q52LG2 175 aa5.45□□□□□ -1.54
CHRFAM7A-204ENST00000562729 KCNQ1DNQ9H478 68 aa5.45□□□□□ -1.54
CHRFAM7A-204ENST00000562729 TRBV10-2A0A0K0K1G8 114 aa5.44□□□□□ -1.54
CHRFAM7A-204ENST00000562729 HINT1P49773 126 aaPredicted RBP5.44□□□□□ -1.54
CHRFAM7A-204ENST00000562729 SMCR5Q8TEV8 140 aa5.44□□□□□ -1.54
CHRFAM7A-204ENST00000562729 SPRR4Q96PI1 79 aa5.44□□□□□ -1.54
CHRFAM7A-204ENST00000562729 PPDPFQ9H3Y8 114 aa5.44□□□□□ -1.54
CHRFAM7A-204ENST00000562729 CBY1Q9Y3M2 126 aa5.44□□□□□ -1.54
CHRFAM7A-204ENST00000562729 A0A0J9YXY3 114 aa5.43□□□□□ -1.54
CHRFAM7A-204ENST00000562729 C20orf202A1L168 122 aa5.43□□□□□ -1.54
CHRFAM7A-204ENST00000562729 NDUFC2O95298 119 aa5.43□□□□□ -1.54
CHRFAM7A-204ENST00000562729 KRTDAPP60985 99 aa5.43□□□□□ -1.54
CHRFAM7A-204ENST00000562729 JOSD1Q15040 202 aaPredicted RBP5.43□□□□□ -1.54
CHRFAM7A-204ENST00000562729 PET117Q6UWS5 81 aa5.43□□□□□ -1.54
CHRFAM7A-204ENST00000562729 OR13C6PQ8NH95 151 aa5.43□□□□□ -1.54
CHRFAM7A-204ENST00000562729 TRAV23DV6A0A075B6W5 121 aa5.42□□□□□ -1.54
CHRFAM7A-204ENST00000562729 ZNF815PA8K554 130 aa5.42□□□□□ -1.54
CHRFAM7A-204ENST00000562729 GAGE2AQ6NT46 116 aa5.42□□□□□ -1.54
CHRFAM7A-204ENST00000562729 SPAG11AQ6PDA7 123 aa5.42□□□□□ -1.54
CHRFAM7A-204ENST00000562729 C3orf22Q8N5N4 141 aa5.42□□□□□ -1.54
CHRFAM7A-204ENST00000562729 RETNLBQ9BQ08 111 aa5.42□□□□□ -1.54
CHRFAM7A-204ENST00000562729 LOC107984156A0A0G2JMH3 177 aa5.41□□□□□ -1.54
CHRFAM7A-204ENST00000562729 SPRR1AP35321 89 aa5.41□□□□□ -1.54
CHRFAM7A-204ENST00000562729 LINC01545Q5VT33 79 aa5.41□□□□□ -1.54
CHRFAM7A-204ENST00000562729 ARL17AQ8IVW1 177 aa5.41□□□□□ -1.54
CHRFAM7A-204ENST00000562729 RNF213Q63HN8 5207 aa5.4□□□□□ -1.54
CHRFAM7A-204ENST00000562729 IGLV9-49A0A0B4J1Y8 123 aa5.4□□□□□ -1.54
CHRFAM7A-204ENST00000562729 ADAMTSL4-AS1Q5T5F5 129 aa5.4□□□□□ -1.54
CHRFAM7A-204ENST00000562729 SCGB1D4Q6XE38 83 aa5.4□□□□□ -1.54
CHRFAM7A-204ENST00000562729 ZNF73O43830 326 aaPredicted RBP5.39□□□□□ -1.55
CHRFAM7A-204ENST00000562729 IGLV6-57P01721 117 aa5.39□□□□□ -1.55
CHRFAM7A-204ENST00000562729 C3orf79P0CE67 100 aa5.39□□□□□ -1.55
CHRFAM7A-204ENST00000562729 Q6ZRX8 168 aa5.39□□□□□ -1.55
CHRFAM7A-204ENST00000562729 Q8NBF4 154 aa5.39□□□□□ -1.55
CHRFAM7A-204ENST00000562729 COPS9Q8WXC6 57 aa5.39□□□□□ -1.55
CHRFAM7A-204ENST00000562729 SPANXCQ9NY87 97 aa5.39□□□□□ -1.55
CHRFAM7A-204ENST00000562729 LPAP08519 4548 aa5.38□□□□□ -1.55
CHRFAM7A-204ENST00000562729 IGLV7-46A0A075B6I9 117 aa5.38□□□□□ -1.55
CHRFAM7A-204ENST00000562729 KRTAP4-16G5E9R7 235 aaPredicted RBP5.38□□□□□ -1.55
CHRFAM7A-204ENST00000562729 TIMM17BO60830 172 aa5.38□□□□□ -1.55
CHRFAM7A-204ENST00000562729 AKR1D1P51857 326 aa5.38□□□□□ -1.55
CHRFAM7A-204ENST00000562729 CTAG1AP78358 180 aa5.38□□□□□ -1.55
CHRFAM7A-204ENST00000562729 C9orf153Q5TBE3 101 aa5.38□□□□□ -1.55
CHRFAM7A-204ENST00000562729 SOSTDC1Q6X4U4 206 aa5.38□□□□□ -1.55
CHRFAM7A-204ENST00000562729 LINC00308Q8TCZ7 52 aa5.38□□□□□ -1.55
CHRFAM7A-204ENST00000562729 MOBPQ13875 183 aa5.37□□□□□ -1.55
CHRFAM7A-204ENST00000562729 ERC2-IT1O76042 136 aa5.36□□□□□ -1.55
CHRFAM7A-204ENST00000562729 SPINK1P00995 79 aa5.36□□□□□ -1.55
CHRFAM7A-204ENST00000562729 S100A2P29034 98 aa5.36□□□□□ -1.55
CHRFAM7A-204ENST00000562729 LINC00483Q53H64 154 aa5.36□□□□□ -1.55
CHRFAM7A-204ENST00000562729 LINC00518Q8N0U6 118 aa5.36□□□□□ -1.55
CHRFAM7A-204ENST00000562729 ATOH7Q8N100 152 aa5.36□□□□□ -1.55
CHRFAM7A-204ENST00000562729 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
CHRFAM7A-204ENST00000562729 Q9BRP9 147 aa5.36□□□□□ -1.55
CHRFAM7A-204ENST00000562729 SPANXDQ9BXN6 97 aa5.36□□□□□ -1.55
CHRFAM7A-204ENST00000562729 A0A0U1RQV1 116 aa5.35□□□□□ -1.55
CHRFAM7A-204ENST00000562729 COA6Q5JTJ3 125 aaKnown RBP5.35□□□□□ -1.55
CHRFAM7A-204ENST00000562729 TTTY13Q9BZ97 58 aa5.35□□□□□ -1.55
CHRFAM7A-204ENST00000562729 SLC25A34Q6PIV7 304 aa5.34□□□□□ -1.55
CHRFAM7A-204ENST00000562729 SSBP3-AS1Q7Z2R9 100 aa5.34□□□□□ -1.55
CHRFAM7A-204ENST00000562729 LITAFQ99732 161 aa5.34□□□□□ -1.55
CHRFAM7A-204ENST00000562729 DHRS4-AS1Q9P1J3 65 aa5.34□□□□□ -1.55
CHRFAM7A-204ENST00000562729 A6NDN8 102 aa5.33□□□□□ -1.56
CHRFAM7A-204ENST00000562729 HSBP1L1C9JCN9 74 aa5.33□□□□□ -1.56
CHRFAM7A-204ENST00000562729 S100A6P06703 90 aa5.33□□□□□ -1.56
CHRFAM7A-204ENST00000562729 COX7BP24311 80 aa5.33□□□□□ -1.56
CHRFAM7A-204ENST00000562729 SNRPEP62304 92 aaKnown RBP5.32□□□□□ -1.56
CHRFAM7A-204ENST00000562729 TPRXLQ17RH7 258 aa5.32□□□□□ -1.56
CHRFAM7A-204ENST00000562729 FP248Q71RG6 208 aaPredicted RBP5.32□□□□□ -1.56
CHRFAM7A-204ENST00000562729 ST20-AS1Q8NBB2 130 aa5.32□□□□□ -1.56
CHRFAM7A-204ENST00000562729 C5orf52A6NGY3 159 aa5.31□□□□□ -1.56
CHRFAM7A-204ENST00000562729 IFITM1P13164 125 aa5.31□□□□□ -1.56
CHRFAM7A-204ENST00000562729 S100A1P23297 94 aa5.31□□□□□ -1.56
CHRFAM7A-204ENST00000562729 TAL2Q16559 108 aa5.31□□□□□ -1.56
CHRFAM7A-204ENST00000562729 C6orf99Q4VX62 202 aa5.31□□□□□ -1.56
CHRFAM7A-204ENST00000562729 Q6ZVH6 145 aa5.31□□□□□ -1.56
CHRFAM7A-204ENST00000562729 DEFB105AQ8NG35 78 aa5.31□□□□□ -1.56
CHRFAM7A-204ENST00000562729 SLC25A20O43772 301 aa5.3□□□□□ -1.56
CHRFAM7A-204ENST00000562729 LAMTOR3Q9UHA4 124 aa5.3□□□□□ -1.56
CHRFAM7A-204ENST00000562729 ELOF1P60002 83 aaKnown RBP5.29□□□□□ -1.56
CHRFAM7A-204ENST00000562729 PCP2Q8IVA1 136 aa5.29□□□□□ -1.56
CHRFAM7A-204ENST00000562729 MUSTN1Q8IVN3 82 aa5.29□□□□□ -1.56
CHRFAM7A-204ENST00000562729 TRAV13-2A0A0B4J235 113 aa5.28□□□□□ -1.56
CHRFAM7A-204ENST00000562729 RPS29P62273 56 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms