RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 SCGB1C2P0DMR2 95 aa8.75□□□□□ -1.01
CLK3-209ENST00000562670 VAMP3Q15836 100 aa8.75□□□□□ -1.01
CLK3-209ENST00000562670 C6orf99Q4VX62 202 aa8.75□□□□□ -1.01
CLK3-209ENST00000562670 KRTAP10-1P60331 282 aa8.74□□□□□ -1.01
CLK3-209ENST00000562670 GTF2H5Q6ZYL4 71 aa8.74□□□□□ -1.01
CLK3-209ENST00000562670 A0A1B0GX51 115 aa8.73□□□□□ -1.01
CLK3-209ENST00000562670 LST1O00453 97 aa8.73□□□□□ -1.01
CLK3-209ENST00000562670 ELOF1P60002 83 aaKnown RBP8.73□□□□□ -1.01
CLK3-209ENST00000562670 PKHD1P08F94 4074 aa8.72□□□□□ -1.01
CLK3-209ENST00000562670 KRTAP4-16G5E9R7 235 aaPredicted RBP8.72□□□□□ -1.01
CLK3-209ENST00000562670 TCL1BO95988 128 aa8.72□□□□□ -1.01
CLK3-209ENST00000562670 ATXN8Q156A1 80 aa8.72□□□□□ -1.01
CLK3-209ENST00000562670 PHF5AQ7RTV0 110 aaKnown RBP8.72□□□□□ -1.01
CLK3-209ENST00000562670 DPH3Q96FX2 82 aa8.72□□□□□ -1.01
CLK3-209ENST00000562670 RPL37AP8A6NKH3 93 aa8.71□□□□□ -1.02
CLK3-209ENST00000562670 REG3GQ6UW15 175 aa8.71□□□□□ -1.02
CLK3-209ENST00000562670 RYR3Q15413 4870 aa8.71□□□□□ -1.02
CLK3-209ENST00000562670 TRACP01848 142 aa8.7□□□□□ -1.02
CLK3-209ENST00000562670 UBE2BP63146 152 aa8.7□□□□□ -1.02
CLK3-209ENST00000562670 CLEC2BQ92478 149 aa8.7□□□□□ -1.02
CLK3-209ENST00000562670 FAM30AQ9NZY2 134 aa8.7□□□□□ -1.02
CLK3-209ENST00000562670 COX7BP24311 80 aa8.69□□□□□ -1.02
CLK3-209ENST00000562670 UBE2V1Q13404 147 aa8.69□□□□□ -1.02
CLK3-209ENST00000562670 LINC00528Q8N1L1 170 aa8.69□□□□□ -1.02
CLK3-209ENST00000562670 LRP1BQ9NZR2 4599 aa8.69□□□□□ -1.02
CLK3-209ENST00000562670 DYNC1H1Q14204 4646 aaKnown RBP8.68□□□□□ -1.02
CLK3-209ENST00000562670 LINC00575Q6W349 94 aa8.68□□□□□ -1.02
CLK3-209ENST00000562670 Q6ZRX8 168 aa8.68□□□□□ -1.02
CLK3-209ENST00000562670 SCXQ7RTU7 201 aa8.68□□□□□ -1.02
CLK3-209ENST00000562670 CIRBP-AS1Q8TBR5 109 aa8.68□□□□□ -1.02
CLK3-209ENST00000562670 FAM218AQ96MZ4 157 aa8.68□□□□□ -1.02
CLK3-209ENST00000562670 ETDCA0A1B0GVM5 59 aa8.67□□□□□ -1.02
CLK3-209ENST00000562670 B5MCH6 92 aa8.67□□□□□ -1.02
CLK3-209ENST00000562670 H0Y9J4 135 aa8.67□□□□□ -1.02
CLK3-209ENST00000562670 INAFM2P0DMQ5 153 aa8.67□□□□□ -1.02
CLK3-209ENST00000562670 H3BMG7 143 aa8.66□□□□□ -1.02
CLK3-209ENST00000562670 SNCGO76070 127 aa8.66□□□□□ -1.02
CLK3-209ENST00000562670 KRTAP11-1Q8IUC1 163 aa8.66□□□□□ -1.02
CLK3-209ENST00000562670 SLC25A20O43772 301 aa8.65□□□□□ -1.02
CLK3-209ENST00000562670 DHRS4-AS1Q9P1J3 65 aa8.65□□□□□ -1.02
CLK3-209ENST00000562670 BCE1O60756 84 aa8.64□□□□□ -1.03
CLK3-209ENST00000562670 LINC01600Q96MT4 127 aa8.64□□□□□ -1.03
CLK3-209ENST00000562670 hADV29S1A0JD25 119 aa8.63□□□□□ -1.03
CLK3-209ENST00000562670 DNAL4O96015 105 aa8.63□□□□□ -1.03
CLK3-209ENST00000562670 KRTAP13-1Q8IUC0 172 aa8.62□□□□□ -1.03
CLK3-209ENST00000562670 PRO0461Q9UI25 63 aa8.62□□□□□ -1.03
CLK3-209ENST00000562670 F8W1H4 67 aa8.61□□□□□ -1.03
CLK3-209ENST00000562670 H3BT86 120 aa8.61□□□□□ -1.03
CLK3-209ENST00000562670 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.61□□□□□ -1.03
CLK3-209ENST00000562670 FAM19A1Q7Z5A9 133 aa8.61□□□□□ -1.03
CLK3-209ENST00000562670 Q9BRP9 147 aa8.61□□□□□ -1.03
CLK3-209ENST00000562670 PSORS1C2Q9UIG4 136 aa8.61□□□□□ -1.03
CLK3-209ENST00000562670 C9JAW5 83 aa8.6□□□□□ -1.03
CLK3-209ENST00000562670 H3BQ85 93 aa8.6□□□□□ -1.03
CLK3-209ENST00000562670 OCIAD2Q56VL3 154 aa8.6□□□□□ -1.03
CLK3-209ENST00000562670 GHRHP01286 108 aa8.59□□□□□ -1.03
CLK3-209ENST00000562670 SMCR5Q8TEV8 140 aa8.58□□□□□ -1.04
CLK3-209ENST00000562670 ORMDL1Q9P0S3 153 aa8.58□□□□□ -1.04
CLK3-209ENST00000562670 APOBP04114 4563 aaKnown RBP8.58□□□□□ -1.04
CLK3-209ENST00000562670 UBE2AP49459 152 aa8.57□□□□□ -1.04
CLK3-209ENST00000562670 PRLHP81277 87 aa8.57□□□□□ -1.04
CLK3-209ENST00000562670 Q6ZQY7 126 aa8.57□□□□□ -1.04
CLK3-209ENST00000562670 PPDPFLQ8WWR9 84 aa8.57□□□□□ -1.04
CLK3-209ENST00000562670 XGP55808 180 aa8.56□□□□□ -1.04
CLK3-209ENST00000562670 ANKRD29Q8N6D5 301 aa8.56□□□□□ -1.04
CLK3-209ENST00000562670 SMCPP49901 116 aaPredicted RBP8.55□□□□□ -1.04
CLK3-209ENST00000562670 C1orf137Q5JT78 98 aa8.55□□□□□ -1.04
CLK3-209ENST00000562670 IGLV5-48A0A075B6I7 105 aa8.54□□□□□ -1.04
CLK3-209ENST00000562670 TMEM256-PLSCR3K7ERE1 68 aa8.54□□□□□ -1.04
CLK3-209ENST00000562670 MTURNQ8N3F0 131 aa8.54□□□□□ -1.04
CLK3-209ENST00000562670 ZNF861PO60384 105 aa8.53□□□□□ -1.04
CLK3-209ENST00000562670 IGLV7-43P04211 117 aa8.53□□□□□ -1.04
CLK3-209ENST00000562670 BAALC-AS2P0C853 105 aa8.53□□□□□ -1.04
CLK3-209ENST00000562670 HAMPP81172 84 aa8.53□□□□□ -1.04
CLK3-209ENST00000562670 CDK2AP2O75956 126 aa8.52□□□□□ -1.05
CLK3-209ENST00000562670 ERC2-IT1O76042 136 aa8.52□□□□□ -1.05
CLK3-209ENST00000562670 HIGD2AQ9BW72 106 aa8.52□□□□□ -1.05
CLK3-209ENST00000562670 LINC01547P58512 204 aaPredicted RBP8.5□□□□□ -1.05
CLK3-209ENST00000562670 TEN1Q86WV5 123 aa8.5□□□□□ -1.05
CLK3-209ENST00000562670 SPRR1BP22528 89 aa8.49□□□□□ -1.05
CLK3-209ENST00000562670 VPS13BQ7Z7G8 4022 aa8.48□□□□□ -1.05
CLK3-209ENST00000562670 ZNF706Q9Y5V0 76 aaPredicted RBP8.48□□□□□ -1.05
CLK3-209ENST00000562670 TEX49A0A1B0GTD5 131 aa8.47□□□□□ -1.05
CLK3-209ENST00000562670 Q8N377 158 aa8.47□□□□□ -1.05
CLK3-209ENST00000562670 OBSCN-AS1Q96MR7 158 aa8.47□□□□□ -1.05
CLK3-209ENST00000562670 RPL37AP61513 92 aaKnown RBP8.46□□□□□ -1.06
CLK3-209ENST00000562670 ETDBQ3ZM63 59 aa8.46□□□□□ -1.06
CLK3-209ENST00000562670 ST20-AS1Q8NBB2 130 aa8.46□□□□□ -1.06
CLK3-209ENST00000562670 JMJD7-PLA2G4BH0Y9G9 81 aa8.45□□□□□ -1.06
CLK3-209ENST00000562670 LINC00483Q53H64 154 aa8.45□□□□□ -1.06
CLK3-209ENST00000562670 SPRR4Q96PI1 79 aa8.44□□□□□ -1.06
CLK3-209ENST00000562670 NDUFV3P56181 108 aaKnown RBP8.42□□□□□ -1.06
CLK3-209ENST00000562670 HSPG2P98160 4391 aa8.41□□□□□ -1.06
CLK3-209ENST00000562670 KRTAP10-4P60372 401 aaPredicted RBP8.41□□□□□ -1.06
CLK3-209ENST00000562670 SMIM29Q86T20 159 aa8.41□□□□□ -1.06
CLK3-209ENST00000562670 DEFB105AQ8NG35 78 aa8.41□□□□□ -1.06
CLK3-209ENST00000562670 LAMTOR3Q9UHA4 124 aa8.41□□□□□ -1.06
CLK3-209ENST00000562670 C21orf62-AS1Q17RA5 79 aa8.4□□□□□ -1.06
CLK3-209ENST00000562670 IGLV8-61A0A075B6I0 122 aa8.39□□□□□ -1.07
CLK3-209ENST00000562670 SMR3BP02814 79 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms