RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 PRR15Q8IV56 129 aa7.4□□□□□ -1.22
RPAP1-204ENST00000562303 ANAPC11Q9NYG5 84 aa7.4□□□□□ -1.22
RPAP1-204ENST00000562303 LINC00336Q6ZUF6 198 aa7.4□□□□□ -1.23
RPAP1-204ENST00000562303 LINC01554Q52M75 96 aa7.39□□□□□ -1.23
RPAP1-204ENST00000562303 CENPFP49454 3210 aa7.39□□□□□ -1.23
RPAP1-204ENST00000562303 ANKRD11Q6UB99 2663 aaPredicted RBP7.39□□□□□ -1.23
RPAP1-204ENST00000562303 USP9YO00507 2555 aaPredicted RBP7.39□□□□□ -1.23
RPAP1-204ENST00000562303 A8MUN3 132 aa7.38□□□□□ -1.23
RPAP1-204ENST00000562303 IGLV7-43P04211 117 aa7.38□□□□□ -1.23
RPAP1-204ENST00000562303 C9orf129Q5T035 196 aaKnown RBP7.38□□□□□ -1.23
RPAP1-204ENST00000562303 KLK9Q2XQG4 91 aa7.37□□□□□ -1.23
RPAP1-204ENST00000562303 A0A0G2JQZ4 141 aa7.37□□□□□ -1.23
RPAP1-204ENST00000562303 A0A1W2PNN7 141 aa7.37□□□□□ -1.23
RPAP1-204ENST00000562303 MIR22HGQ0VDD5 57 aa7.37□□□□□ -1.23
RPAP1-204ENST00000562303 C9orf163Q8N9P6 203 aa7.37□□□□□ -1.23
RPAP1-204ENST00000562303 PRR34Q9NV39 138 aa7.37□□□□□ -1.23
RPAP1-204ENST00000562303 ERC2-IT1O76042 136 aa7.36□□□□□ -1.23
RPAP1-204ENST00000562303 KRTAP10-3P60369 221 aa7.36□□□□□ -1.23
RPAP1-204ENST00000562303 CEP295Q9C0D2 2601 aa7.35□□□□□ -1.23
RPAP1-204ENST00000562303 CYP4F30PQ9H0H9 118 aa7.35□□□□□ -1.23
RPAP1-204ENST00000562303 Q8N377 158 aa7.35□□□□□ -1.23
RPAP1-204ENST00000562303 PSORS1C2Q9UIG4 136 aa7.34□□□□□ -1.23
RPAP1-204ENST00000562303 MTORP42345 2549 aa7.34□□□□□ -1.23
RPAP1-204ENST00000562303 TLX1NBP0CAT3 122 aa7.32□□□□□ -1.24
RPAP1-204ENST00000562303 A0A0D9SG42 100 aa7.32□□□□□ -1.24
RPAP1-204ENST00000562303 PLA2G2DQ9UNK4 145 aa7.31□□□□□ -1.24
RPAP1-204ENST00000562303 FASNP49327 2511 aaKnown RBP7.3□□□□□ -1.24
RPAP1-204ENST00000562303 SPRR4Q96PI1 79 aa7.3□□□□□ -1.24
RPAP1-204ENST00000562303 GIG44P09565 113 aaPredicted RBP7.29□□□□□ -1.24
RPAP1-204ENST00000562303 ZNF575Q86XF7 245 aa7.29□□□□□ -1.24
RPAP1-204ENST00000562303 Q8N1X5 172 aa7.29□□□□□ -1.24
RPAP1-204ENST00000562303 SPTBN4Q9H254 2564 aa7.29□□□□□ -1.24
RPAP1-204ENST00000562303 IGLV5-48A0A075B6I7 105 aa7.28□□□□□ -1.24
RPAP1-204ENST00000562303 CASC10Q5T4H9 136 aa7.28□□□□□ -1.24
RPAP1-204ENST00000562303 EIF4EBP3O60516 100 aaPredicted RBP7.27□□□□□ -1.24
RPAP1-204ENST00000562303 LINC00612Q8N6U2 182 aa7.27□□□□□ -1.25
RPAP1-204ENST00000562303 ANKRD17O75179 2603 aaKnown RBP7.27□□□□□ -1.25
RPAP1-204ENST00000562303 A0A096LNT2 108 aa7.27□□□□□ -1.25
RPAP1-204ENST00000562303 POLQO75417 2590 aa7.26□□□□□ -1.25
RPAP1-204ENST00000562303 Q6ZSA8 131 aa7.26□□□□□ -1.25
RPAP1-204ENST00000562303 FAM104AQ969W3 186 aa7.26□□□□□ -1.25
RPAP1-204ENST00000562303 CNBPP62633 177 aaKnown RBP7.25□□□□□ -1.25
RPAP1-204ENST00000562303 ACANP16112 2415 aa7.25□□□□□ -1.25
RPAP1-204ENST00000562303 CDC42SE1Q9NRR8 79 aa7.25□□□□□ -1.25
RPAP1-204ENST00000562303 M0R2T5 61 aa7.23□□□□□ -1.25
RPAP1-204ENST00000562303 IGLV7-46A0A075B6I9 117 aa7.2□□□□□ -1.26
RPAP1-204ENST00000562303 KLKP1Q107X0 134 aa7.2□□□□□ -1.26
RPAP1-204ENST00000562303 TNP2Q05952 138 aa7.2□□□□□ -1.26
RPAP1-204ENST00000562303 A0A1W2PNM2 257 aa7.19□□□□□ -1.26
RPAP1-204ENST00000562303 CAMK2N1Q7Z7J9 78 aa7.17□□□□□ -1.26
RPAP1-204ENST00000562303 PRR26Q8N8Z3 221 aa7.15□□□□□ -1.26
RPAP1-204ENST00000562303 PCSK5Q92824 1860 aa7.15□□□□□ -1.27
RPAP1-204ENST00000562303 LUZP6Q538Z0 58 aa7.13□□□□□ -1.27
RPAP1-204ENST00000562303 KRTAP1-3Q8IUG1 177 aa7.13□□□□□ -1.27
RPAP1-204ENST00000562303 H7BZZ5 65 aa7.12□□□□□ -1.27
RPAP1-204ENST00000562303 SPANXA2-OT1Q8N9U9 137 aa7.12□□□□□ -1.27
RPAP1-204ENST00000562303 CD164Q04900 197 aa7.12□□□□□ -1.27
RPAP1-204ENST00000562303 KRTAP1-1Q07627 177 aa7.1□□□□□ -1.27
RPAP1-204ENST00000562303 DNAH12Q6ZR08 3092 aa7.09□□□□□ -1.27
RPAP1-204ENST00000562303 PCNTO95613 3336 aa7.09□□□□□ -1.27
RPAP1-204ENST00000562303 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.09□□□□□ -1.27
RPAP1-204ENST00000562303 LINC00483Q53H64 154 aa7.09□□□□□ -1.28
RPAP1-204ENST00000562303 UTRNP46939 3433 aa7.08□□□□□ -1.28
RPAP1-204ENST00000562303 LCA10Q71F78 164 aa7.08□□□□□ -1.28
RPAP1-204ENST00000562303 KTN1-AS1Q86SY8 53 aa7.07□□□□□ -1.28
RPAP1-204ENST00000562303 Q1T7F1 81 aa7.05□□□□□ -1.28
RPAP1-204ENST00000562303 A0A1B0GU33 70 aa7.04□□□□□ -1.28
RPAP1-204ENST00000562303 MGAM2Q2M2H8 2515 aa7.04□□□□□ -1.28
RPAP1-204ENST00000562303 FAM229BQ4G0N7 80 aa7.03□□□□□ -1.28
RPAP1-204ENST00000562303 CSAG1Q6PB30 78 aa7.02□□□□□ -1.29
RPAP1-204ENST00000562303 HRES1P13985 223 aa7.02□□□□□ -1.29
RPAP1-204ENST00000562303 USP24Q9UPU5 2620 aa7.02□□□□□ -1.29
RPAP1-204ENST00000562303 EPG5Q9HCE0 2579 aa7.01□□□□□ -1.29
RPAP1-204ENST00000562303 S4R3F8 94 aa7□□□□□ -1.29
RPAP1-204ENST00000562303 CEP350Q5VT06 3117 aa7□□□□□ -1.29
RPAP1-204ENST00000562303 ZCCHC13Q8WW36 166 aaKnown RBP6.99□□□□□ -1.29
RPAP1-204ENST00000562303 FLNBO75369 2602 aaKnown RBP6.99□□□□□ -1.29
RPAP1-204ENST00000562303 HECTD1Q9ULT8 2610 aa6.99□□□□□ -1.29
RPAP1-204ENST00000562303 PLAC8Q9NZF1 115 aa6.97□□□□□ -1.29
RPAP1-204ENST00000562303 OCR1Q9BZK8 76 aa6.96□□□□□ -1.29
RPAP1-204ENST00000562303 PRRC2CQ9Y520 2896 aaKnown RBP6.94□□□□□ -1.3
RPAP1-204ENST00000562303 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
RPAP1-204ENST00000562303 DMAC1Q96GE9 116 aa6.92□□□□□ -1.3
RPAP1-204ENST00000562303 Q8N9P0 234 aaPredicted RBP6.92□□□□□ -1.3
RPAP1-204ENST00000562303 CR1P17927 2039 aa6.92□□□□□ -1.3
RPAP1-204ENST00000562303 Q5VSD8 79 aa6.91□□□□□ -1.3
RPAP1-204ENST00000562303 R4GN34 69 aa6.91□□□□□ -1.3
RPAP1-204ENST00000562303 MMP24-AS1A0A0U1RRL7 71 aa6.9□□□□□ -1.3
RPAP1-204ENST00000562303 SPINK7P58062 85 aa6.88□□□□□ -1.31
RPAP1-204ENST00000562303 WIPF1O43516 503 aa6.87□□□□□ -1.31
RPAP1-204ENST00000562303 Q5W150 140 aa6.86□□□□□ -1.31
RPAP1-204ENST00000562303 Q75L30 129 aa6.85□□□□□ -1.31
RPAP1-204ENST00000562303 SPRR1AP35321 89 aa6.82□□□□□ -1.32
RPAP1-204ENST00000562303 LCE6AA0A183 80 aa6.82□□□□□ -1.32
RPAP1-204ENST00000562303 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
RPAP1-204ENST00000562303 ATRQ13535 2644 aa6.82□□□□□ -1.32
RPAP1-204ENST00000562303 C5orf42Q9H799 3197 aa6.82□□□□□ -1.32
RPAP1-204ENST00000562303 KRTAP10-1P60331 282 aa6.79□□□□□ -1.32
RPAP1-204ENST00000562303 MAST4O15021 2626 aa6.79□□□□□ -1.32
RPAP1-204ENST00000562303 Q8NDZ9 215 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms