RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 WDFY4Q6ZS81 3184 aa3.43□□□□□ -1.86
CAPN3-211ENST00000562199 ABCA2Q9BZC7 2435 aa3.43□□□□□ -1.86
CAPN3-211ENST00000562199 SPTBN2O15020 2390 aa3.43□□□□□ -1.86
CAPN3-211ENST00000562199 KRTAP10-6P60371 365 aaPredicted RBP3.42□□□□□ -1.86
CAPN3-211ENST00000562199 DCHS1Q96JQ0 3298 aa3.41□□□□□ -1.86
CAPN3-211ENST00000562199 TRGV1A0A0A0MS02 117 aa3.41□□□□□ -1.86
CAPN3-211ENST00000562199 TRBV6-4A0A1B0GX49 114 aa3.41□□□□□ -1.86
CAPN3-211ENST00000562199 CCL18P55774 89 aa3.41□□□□□ -1.86
CAPN3-211ENST00000562199 SPINK7P58062 85 aa3.41□□□□□ -1.86
CAPN3-211ENST00000562199 C9orf129Q5T035 196 aaKnown RBP3.41□□□□□ -1.86
CAPN3-211ENST00000562199 Q8N377 158 aa3.41□□□□□ -1.86
CAPN3-211ENST00000562199 C4orf3Q8WVX3 66 aa3.41□□□□□ -1.86
CAPN3-211ENST00000562199 PCNX1Q96RV3 2341 aa3.41□□□□□ -1.86
CAPN3-211ENST00000562199 WNK2Q9Y3S1 2297 aa3.4□□□□□ -1.86
CAPN3-211ENST00000562199 NCR3O14931 201 aa3.4□□□□□ -1.87
CAPN3-211ENST00000562199 GIG44P09565 113 aaPredicted RBP3.4□□□□□ -1.87
CAPN3-211ENST00000562199 PDE6GP18545 87 aa3.4□□□□□ -1.87
CAPN3-211ENST00000562199 LINC00158P58513 81 aa3.4□□□□□ -1.87
CAPN3-211ENST00000562199 DEFB114Q30KQ6 69 aa3.4□□□□□ -1.87
CAPN3-211ENST00000562199 Q6ZTI0 123 aa3.4□□□□□ -1.87
CAPN3-211ENST00000562199 KLK12Q9UKR0 248 aa3.4□□□□□ -1.87
CAPN3-211ENST00000562199 CNOT1A5YKK6 2376 aaKnown RBP3.4□□□□□ -1.87
CAPN3-211ENST00000562199 A0A096LNT2 108 aa3.39□□□□□ -1.87
CAPN3-211ENST00000562199 H0Y9P7 68 aa3.39□□□□□ -1.87
CAPN3-211ENST00000562199 DEFB136Q30KP8 78 aa3.39□□□□□ -1.87
CAPN3-211ENST00000562199 TOMM7Q9P0U1 55 aa3.39□□□□□ -1.87
CAPN3-211ENST00000562199 CACNA1BQ00975 2339 aa3.39□□□□□ -1.87
CAPN3-211ENST00000562199 CEP250Q9BV73 2442 aa3.39□□□□□ -1.87
CAPN3-211ENST00000562199 DOPEY2Q9Y3R5 2298 aa3.39□□□□□ -1.87
CAPN3-211ENST00000562199 CACNA1HO95180 2353 aa3.38□□□□□ -1.87
CAPN3-211ENST00000562199 DMXL2Q8TDJ6 3036 aa3.38□□□□□ -1.87
CAPN3-211ENST00000562199 A0A1B0GU33 70 aa3.38□□□□□ -1.87
CAPN3-211ENST00000562199 IGLV7-43P04211 117 aa3.38□□□□□ -1.87
CAPN3-211ENST00000562199 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
CAPN3-211ENST00000562199 Q8IZM0 81 aa3.38□□□□□ -1.87
CAPN3-211ENST00000562199 WFDC10AQ9H1F0 79 aa3.38□□□□□ -1.87
CAPN3-211ENST00000562199 RP1L1Q8IWN7 2480 aaPredicted RBP3.38□□□□□ -1.87
CAPN3-211ENST00000562199 ACACAQ13085 2346 aa3.37□□□□□ -1.87
CAPN3-211ENST00000562199 PIEZO2Q9H5I5 2752 aa3.37□□□□□ -1.87
CAPN3-211ENST00000562199 TPRP12270 2363 aaKnown RBP3.37□□□□□ -1.87
CAPN3-211ENST00000562199 HRNRQ86YZ3 2850 aaPredicted RBP3.37□□□□□ -1.87
CAPN3-211ENST00000562199 IGLV4-60A0A075B6I1 120 aa3.37□□□□□ -1.87
CAPN3-211ENST00000562199 LINC00959A0A1B0GUT2 108 aa3.37□□□□□ -1.87
CAPN3-211ENST00000562199 Q5W150 140 aa3.37□□□□□ -1.87
CAPN3-211ENST00000562199 SPATA8Q6RVD6 105 aa3.37□□□□□ -1.87
CAPN3-211ENST00000562199 C9orf163Q8N9P6 203 aa3.37□□□□□ -1.87
CAPN3-211ENST00000562199 SPRR4Q96PI1 79 aa3.37□□□□□ -1.87
CAPN3-211ENST00000562199 MED13LQ71F56 2210 aa3.37□□□□□ -1.87
CAPN3-211ENST00000562199 ANKRD11Q6UB99 2663 aaPredicted RBP3.37□□□□□ -1.87
CAPN3-211ENST00000562199 LOC110117498A0A087WWA1 95 aa3.36□□□□□ -1.87
CAPN3-211ENST00000562199 UQCR11O14957 56 aa3.36□□□□□ -1.87
CAPN3-211ENST00000562199 NOP10Q9NPE3 64 aaKnown RBP3.36□□□□□ -1.87
CAPN3-211ENST00000562199 PRRC2CQ9Y520 2896 aaKnown RBP3.36□□□□□ -1.87
CAPN3-211ENST00000562199 KALRNO60229 2985 aa3.36□□□□□ -1.87
CAPN3-211ENST00000562199 ADGRG4Q8IZF6 3080 aa3.35□□□□□ -1.87
CAPN3-211ENST00000562199 PTPRQQ9UMZ3 2332 aa3.35□□□□□ -1.87
CAPN3-211ENST00000562199 TRGV2A0A075B6R0 118 aa3.35□□□□□ -1.87
CAPN3-211ENST00000562199 TRGV4A0A0C4DH28 118 aa3.35□□□□□ -1.87
CAPN3-211ENST00000562199 IGKV3OR2-268A0A0C4DH90 116 aa3.35□□□□□ -1.87
CAPN3-211ENST00000562199 COX17Q14061 63 aa3.35□□□□□ -1.87
CAPN3-211ENST00000562199 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
CAPN3-211ENST00000562199 MUC3AQ02505 3323 aa3.35□□□□□ -1.87
CAPN3-211ENST00000562199 CSMD1Q96PZ7 3565 aa3.35□□□□□ -1.87
CAPN3-211ENST00000562199 AKAP13Q12802 2813 aa3.34□□□□□ -1.87
CAPN3-211ENST00000562199 ZFHX3Q15911 3703 aa3.34□□□□□ -1.87
CAPN3-211ENST00000562199 ASPMQ8IZT6 3477 aa3.34□□□□□ -1.87
CAPN3-211ENST00000562199 A0A1B0GUV1 79 aa3.34□□□□□ -1.87
CAPN3-211ENST00000562199 ZNF861PO60384 105 aa3.34□□□□□ -1.87
CAPN3-211ENST00000562199 LINC00612Q8N6U2 182 aa3.34□□□□□ -1.87
CAPN3-211ENST00000562199 BOD1L1Q8NFC6 3051 aa3.34□□□□□ -1.88
CAPN3-211ENST00000562199 EP300Q09472 2414 aaPredicted RBP3.33□□□□□ -1.88
CAPN3-211ENST00000562199 LINC00575Q6W349 94 aa3.33□□□□□ -1.88
CAPN3-211ENST00000562199 MGAQ8IWI9 3026 aa3.33□□□□□ -1.88
CAPN3-211ENST00000562199 SPTBN1Q01082 2364 aaKnown RBP3.33□□□□□ -1.88
CAPN3-211ENST00000562199 MAP1BP46821 2468 aaKnown RBP3.33□□□□□ -1.88
CAPN3-211ENST00000562199 BDP1A6H8Y1 2624 aa3.33□□□□□ -1.88
CAPN3-211ENST00000562199 DCHS2Q6V1P9 2916 aa3.33□□□□□ -1.88
CAPN3-211ENST00000562199 TTC28Q96AY4 2481 aa3.32□□□□□ -1.88
CAPN3-211ENST00000562199 HAMPP81172 84 aa3.32□□□□□ -1.88
CAPN3-211ENST00000562199 PTPRZ1P23471 2315 aaPredicted RBP3.32□□□□□ -1.88
CAPN3-211ENST00000562199 PLA2G2AP14555 144 aa3.31□□□□□ -1.88
CAPN3-211ENST00000562199 COA5Q86WW8 74 aa3.31□□□□□ -1.88
CAPN3-211ENST00000562199 TLN1Q9Y490 2541 aaKnown RBP3.31□□□□□ -1.88
CAPN3-211ENST00000562199 IGLV6-57P01721 117 aa3.3□□□□□ -1.88
CAPN3-211ENST00000562199 DEFB116Q30KQ4 102 aa3.3□□□□□ -1.88
CAPN3-211ENST00000562199 MAPK1IP1LQ8NDC0 245 aa3.3□□□□□ -1.88
CAPN3-211ENST00000562199 DMXL1Q9Y485 3027 aa3.29□□□□□ -1.88
CAPN3-211ENST00000562199 GVQW2A0A096LPI5 108 aaPredicted RBP3.29□□□□□ -1.88
CAPN3-211ENST00000562199 M0R2N4 97 aa3.29□□□□□ -1.88
CAPN3-211ENST00000562199 CLPSL2Q6UWE3 100 aa3.29□□□□□ -1.88
CAPN3-211ENST00000562199 ST20-AS1Q8NBB2 130 aa3.29□□□□□ -1.88
CAPN3-211ENST00000562199 PRO0255Q9UI72 69 aa3.29□□□□□ -1.88
CAPN3-211ENST00000562199 ATMQ13315 3056 aa3.29□□□□□ -1.88
CAPN3-211ENST00000562199 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.28□□□□□ -1.88
CAPN3-211ENST00000562199 ZNF292O60281 2723 aa3.28□□□□□ -1.88
CAPN3-211ENST00000562199 COL6A6A6NMZ7 2263 aa3.28□□□□□ -1.88
CAPN3-211ENST00000562199 A0A0J9YWU9 116 aa3.28□□□□□ -1.88
CAPN3-211ENST00000562199 ETDCA0A1B0GVM5 59 aa3.28□□□□□ -1.88
CAPN3-211ENST00000562199 IGKV4-1P06312 121 aa3.28□□□□□ -1.88
CAPN3-211ENST00000562199 Q6ZQY7 126 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms