RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 Q6ZRX8 168 aa13.8□□□□□ -0.2
CDR2-202ENST00000561630 SPANXCQ9NY87 97 aa13.8□□□□□ -0.2
CDR2-202ENST00000561630 TRAV23DV6A0A075B6W5 121 aa13.79□□□□□ -0.2
CDR2-202ENST00000561630 LINC00483Q53H64 154 aa13.78□□□□□ -0.2
CDR2-202ENST00000561630 Q9BRP9 147 aa13.78□□□□□ -0.2
CDR2-202ENST00000561630 PPDPFQ9H3Y8 114 aa13.78□□□□□ -0.2
CDR2-202ENST00000561630 ZNF73O43830 326 aaPredicted RBP13.77□□□□□ -0.21
CDR2-202ENST00000561630 ERC2-IT1O76042 136 aa13.77□□□□□ -0.21
CDR2-202ENST00000561630 S100A1P23297 94 aa13.76□□□□□ -0.21
CDR2-202ENST00000561630 CBY1Q9Y3M2 126 aa13.75□□□□□ -0.21
CDR2-202ENST00000561630 AKR1D1P51857 326 aa13.74□□□□□ -0.21
CDR2-202ENST00000561630 JOSD1Q15040 202 aaPredicted RBP13.74□□□□□ -0.21
CDR2-202ENST00000561630 ANKRD39Q53RE8 183 aa13.74□□□□□ -0.21
CDR2-202ENST00000561630 GAGE2AQ6NT46 116 aa13.74□□□□□ -0.21
CDR2-202ENST00000561630 SPAG11AQ6PDA7 123 aa13.74□□□□□ -0.21
CDR2-202ENST00000561630 ATOH7Q8N100 152 aa13.73□□□□□ -0.21
CDR2-202ENST00000561630 RETNLBQ9BQ08 111 aa13.72□□□□□ -0.21
CDR2-202ENST00000561630 SCGB1D4Q6XE38 83 aa13.71□□□□□ -0.21
CDR2-202ENST00000561630 OR13C6PQ8NH95 151 aa13.7□□□□□ -0.22
CDR2-202ENST00000561630 SPANXDQ9BXN6 97 aa13.7□□□□□ -0.22
CDR2-202ENST00000561630 Q8NBF4 154 aa13.69□□□□□ -0.22
CDR2-202ENST00000561630 HINT1P49773 126 aaPredicted RBP13.68□□□□□ -0.22
CDR2-202ENST00000561630 LINC00518Q8N0U6 118 aa13.68□□□□□ -0.22
CDR2-202ENST00000561630 HIST3H2BBQ8N257 126 aa13.68□□□□□ -0.22
CDR2-202ENST00000561630 C4orf48Q5BLP8 95 aa13.67□□□□□ -0.22
CDR2-202ENST00000561630 PCP2Q8IVA1 136 aa13.66□□□□□ -0.22
CDR2-202ENST00000561630 HIST1H2BLQ99880 126 aa13.66□□□□□ -0.22
CDR2-202ENST00000561630 S100A2P29034 98 aa13.64□□□□□ -0.23
CDR2-202ENST00000561630 SNRPEP62304 92 aaKnown RBP13.64□□□□□ -0.23
CDR2-202ENST00000561630 COPS9Q8WXC6 57 aa13.64□□□□□ -0.23
CDR2-202ENST00000561630 MUC2Q02817 5179 aa13.64□□□□□ -0.23
CDR2-202ENST00000561630 IGLV9-49A0A0B4J1Y8 123 aa13.63□□□□□ -0.23
CDR2-202ENST00000561630 C5orf52A6NGY3 159 aa13.63□□□□□ -0.23
CDR2-202ENST00000561630 IFITM1P13164 125 aa13.63□□□□□ -0.23
CDR2-202ENST00000561630 Q6ZVH6 145 aa13.63□□□□□ -0.23
CDR2-202ENST00000561630 MOBPQ13875 183 aa13.62□□□□□ -0.23
CDR2-202ENST00000561630 IGLV7-46A0A075B6I9 117 aa13.61□□□□□ -0.23
CDR2-202ENST00000561630 SSBP3-AS1Q7Z2R9 100 aa13.61□□□□□ -0.23
CDR2-202ENST00000561630 SPINK1P00995 79 aa13.6□□□□□ -0.23
CDR2-202ENST00000561630 ST20-AS1Q8NBB2 130 aa13.6□□□□□ -0.23
CDR2-202ENST00000561630 DHRS4-AS1Q9P1J3 65 aa13.59□□□□□ -0.23
CDR2-202ENST00000561630 S100A6P06703 90 aa13.58□□□□□ -0.24
CDR2-202ENST00000561630 TPRXLQ17RH7 258 aa13.58□□□□□ -0.24
CDR2-202ENST00000561630 ELOF1P60002 83 aaKnown RBP13.57□□□□□ -0.24
CDR2-202ENST00000561630 C6orf99Q4VX62 202 aa13.57□□□□□ -0.24
CDR2-202ENST00000561630 MUSTN1Q8IVN3 82 aa13.57□□□□□ -0.24
CDR2-202ENST00000561630 COX7BP24311 80 aa13.55□□□□□ -0.24
CDR2-202ENST00000561630 FP248Q71RG6 208 aaPredicted RBP13.54□□□□□ -0.24
CDR2-202ENST00000561630 TRBV7-6A0A0J9YX20 115 aa13.52□□□□□ -0.25
CDR2-202ENST00000561630 HSBP1L1C9JCN9 74 aa13.52□□□□□ -0.25
CDR2-202ENST00000561630 SPRR1BP22528 89 aa13.52□□□□□ -0.25
CDR2-202ENST00000561630 RPS29P62273 56 aaKnown RBP13.52□□□□□ -0.25
CDR2-202ENST00000561630 A6NDN8 102 aa13.51□□□□□ -0.25
CDR2-202ENST00000561630 C9orf153Q5TBE3 101 aa13.51□□□□□ -0.25
CDR2-202ENST00000561630 CDIP1Q9H305 208 aa13.51□□□□□ -0.25
CDR2-202ENST00000561630 SLC25A34Q6PIV7 304 aa13.48□□□□□ -0.25
CDR2-202ENST00000561630 TRAV13-2A0A0B4J235 113 aa13.46□□□□□ -0.25
CDR2-202ENST00000561630 A0A1B0GWB2 263 aa13.46□□□□□ -0.25
CDR2-202ENST00000561630 Q8N377 158 aa13.46□□□□□ -0.25
CDR2-202ENST00000561630 SCGB1D1O95968 90 aa13.43□□□□□ -0.26
CDR2-202ENST00000561630 LAMTOR3Q9UHA4 124 aa13.43□□□□□ -0.26
CDR2-202ENST00000561630 SLC25A20O43772 301 aa13.42□□□□□ -0.26
CDR2-202ENST00000561630 MUC17Q685J3 4493 aa13.41□□□□□ -0.26
CDR2-202ENST00000561630 TAL2Q16559 108 aa13.41□□□□□ -0.26
CDR2-202ENST00000561630 SMIM11BQ8TCY0 68 aa13.41□□□□□ -0.26
CDR2-202ENST00000561630 A4D1N5 150 aa13.4□□□□□ -0.26
CDR2-202ENST00000561630 TEX49A0A1B0GTD5 131 aa13.39□□□□□ -0.27
CDR2-202ENST00000561630 KRTAP13-3Q3SY46 172 aa13.39□□□□□ -0.27
CDR2-202ENST00000561630 DEFB105AQ8NG35 78 aa13.39□□□□□ -0.27
CDR2-202ENST00000561630 IGLV5-48A0A075B6I7 105 aa13.35□□□□□ -0.27
CDR2-202ENST00000561630 LINC01547P58512 204 aaPredicted RBP13.35□□□□□ -0.27
CDR2-202ENST00000561630 Q1RN00 199 aa13.35□□□□□ -0.27
CDR2-202ENST00000561630 NHP2Q9NX24 153 aaKnown RBP13.34□□□□□ -0.27
CDR2-202ENST00000561630 COX8AP10176 69 aa13.33□□□□□ -0.28
CDR2-202ENST00000561630 SMIM29Q86T20 159 aa13.33□□□□□ -0.28
CDR2-202ENST00000561630 DLEU1O43261 78 aa13.3□□□□□ -0.28
CDR2-202ENST00000561630 VAMP3Q15836 100 aa13.3□□□□□ -0.28
CDR2-202ENST00000561630 HIST1H4GQ99525 98 aa13.3□□□□□ -0.28
CDR2-202ENST00000561630 PRO1933Q9H354 126 aa13.3□□□□□ -0.28
CDR2-202ENST00000561630 HRCT1Q6UXD1 115 aa13.29□□□□□ -0.28
CDR2-202ENST00000561630 LIMD2Q9BT23 127 aa13.29□□□□□ -0.28
CDR2-202ENST00000561630 A0A0U1RQV1 116 aa13.28□□□□□ -0.28
CDR2-202ENST00000561630 CD164Q04900 197 aa13.28□□□□□ -0.28
CDR2-202ENST00000561630 LINC00575Q6W349 94 aa13.26□□□□□ -0.29
CDR2-202ENST00000561630 C12orf57Q99622 126 aa13.24□□□□□ -0.29
CDR2-202ENST00000561630 FAT4Q6V0I7 4981 aa13.23□□□□□ -0.29
CDR2-202ENST00000561630 C14orf144Q96I85 54 aa13.23□□□□□ -0.29
CDR2-202ENST00000561630 PAM16Q9Y3D7 125 aa13.22□□□□□ -0.29
CDR2-202ENST00000561630 H7C2G1 150 aa13.21□□□□□ -0.29
CDR2-202ENST00000561630 SPATA45Q537H7 98 aa13.21□□□□□ -0.29
CDR2-202ENST00000561630 hADV29S1A0JD25 119 aa13.2□□□□□ -0.3
CDR2-202ENST00000561630 ASB16-AS1Q495Z4 193 aa13.2□□□□□ -0.3
CDR2-202ENST00000561630 VAMP8Q9BV40 100 aa13.19□□□□□ -0.3
CDR2-202ENST00000561630 HIGD1BQ9P298 99 aa13.19□□□□□ -0.3
CDR2-202ENST00000561630 Q6ZQY7 126 aa13.18□□□□□ -0.3
CDR2-202ENST00000561630 Q5XG85 94 aa13.17□□□□□ -0.3
CDR2-202ENST00000561630 A0A0G2JQZ4 141 aa13.16□□□□□ -0.3
CDR2-202ENST00000561630 BVES-AS1Q5T3Y7 98 aa13.16□□□□□ -0.3
CDR2-202ENST00000561630 XP32Q5T750 250 aa13.15□□□□□ -0.3
CDR2-202ENST00000561630 CFC1BP0CG36 223 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms