RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 UBE2BP63146 152 aa7.8□□□□□ -1.16
HERC1-214ENST00000561400 LINC00269Q8N2A0 174 aa7.8□□□□□ -1.16
HERC1-214ENST00000561400 CDC42SE2Q9NRR3 84 aa7.8□□□□□ -1.16
HERC1-214ENST00000561400 IGIPA6NJ69 53 aa7.79□□□□□ -1.16
HERC1-214ENST00000561400 C11orf86A6NJI1 115 aa7.79□□□□□ -1.16
HERC1-214ENST00000561400 A8MUN3 132 aa7.79□□□□□ -1.16
HERC1-214ENST00000561400 RNASE13Q5GAN3 156 aaKnown RBP7.79□□□□□ -1.16
HERC1-214ENST00000561400 CLPSL2Q6UWE3 100 aa7.79□□□□□ -1.16
HERC1-214ENST00000561400 TRBV10-3A0A0K0K1G6 114 aa7.79□□□□□ -1.16
HERC1-214ENST00000561400 ENHOQ6UWT2 76 aa7.79□□□□□ -1.16
HERC1-214ENST00000561400 PRR34Q9NV39 138 aa7.79□□□□□ -1.16
HERC1-214ENST00000561400 IGLV4-69A0A075B6H9 119 aa7.78□□□□□ -1.16
HERC1-214ENST00000561400 DNAH2Q9P225 4427 aa7.78□□□□□ -1.16
HERC1-214ENST00000561400 DNAH10Q8IVF4 4471 aa7.78□□□□□ -1.16
HERC1-214ENST00000561400 IGLV4-3A0A075B6K6 122 aa7.78□□□□□ -1.16
HERC1-214ENST00000561400 LCA10Q71F78 164 aa7.78□□□□□ -1.16
HERC1-214ENST00000561400 RYR2Q92736 4967 aa7.77□□□□□ -1.17
HERC1-214ENST00000561400 COX7A2LO14548 114 aa7.77□□□□□ -1.17
HERC1-214ENST00000561400 REG3AQ06141 175 aa7.77□□□□□ -1.17
HERC1-214ENST00000561400 Q9HAA7 133 aa7.77□□□□□ -1.17
HERC1-214ENST00000561400 IGKV3OR2-268A0A0C4DH90 116 aa7.76□□□□□ -1.17
HERC1-214ENST00000561400 TMEM141Q96I45 108 aa7.76□□□□□ -1.17
HERC1-214ENST00000561400 LEPROTO15243 131 aa7.75□□□□□ -1.17
HERC1-214ENST00000561400 CRPP02741 224 aa7.75□□□□□ -1.17
HERC1-214ENST00000561400 FAM19A3Q7Z5A8 133 aa7.75□□□□□ -1.17
HERC1-214ENST00000561400 IGLV10-54A0A075B6I4 117 aa7.74□□□□□ -1.17
HERC1-214ENST00000561400 FUSP35637 526 aaKnown RBP eCLIP7.74□□□□□ -1.17
HERC1-214ENST00000561400 LINC00959A0A1B0GUT2 108 aa7.74□□□□□ -1.17
HERC1-214ENST00000561400 MIAQ16674 131 aa7.74□□□□□ -1.17
HERC1-214ENST00000561400 Q6ZRP5 223 aa7.74□□□□□ -1.17
HERC1-214ENST00000561400 RYR3Q15413 4870 aa7.73□□□□□ -1.17
HERC1-214ENST00000561400 KRTAP26-1Q6PEX3 210 aa7.72□□□□□ -1.17
HERC1-214ENST00000561400 Q6ZRN7 208 aaPredicted RBP7.72□□□□□ -1.17
HERC1-214ENST00000561400 FRAS1Q86XX4 4008 aa7.72□□□□□ -1.17
HERC1-214ENST00000561400 IGKV2D-24A0A075B6R9 120 aa7.72□□□□□ -1.17
HERC1-214ENST00000561400 C1orf134Q5TEV5 83 aa7.72□□□□□ -1.17
HERC1-214ENST00000561400 C7orf65Q6ZTY9 151 aa7.72□□□□□ -1.17
HERC1-214ENST00000561400 DIRC1Q969H9 104 aa7.72□□□□□ -1.17
HERC1-214ENST00000561400 OBSCN-AS1Q96MR7 158 aa7.72□□□□□ -1.17
HERC1-214ENST00000561400 LITAFQ99732 161 aa7.72□□□□□ -1.17
HERC1-214ENST00000561400 A0A0J9YXY3 114 aa7.71□□□□□ -1.17
HERC1-214ENST00000561400 A6NN06 94 aa7.71□□□□□ -1.18
HERC1-214ENST00000561400 SYCNQ0VAF6 134 aa7.71□□□□□ -1.18
HERC1-214ENST00000561400 CHCHD10Q8WYQ3 142 aaPredicted RBP7.7□□□□□ -1.18
HERC1-214ENST00000561400 RTL8CO15255 209 aa7.7□□□□□ -1.18
HERC1-214ENST00000561400 TRBV7-4A0A0J9YYF1 115 aa7.69□□□□□ -1.18
HERC1-214ENST00000561400 LINC00242Q5T6M2 205 aa7.69□□□□□ -1.18
HERC1-214ENST00000561400 ATP11AUNQ6ZP68 121 aa7.69□□□□□ -1.18
HERC1-214ENST00000561400 C14orf132Q9NPU4 83 aa7.69□□□□□ -1.18
HERC1-214ENST00000561400 DNAH17Q9UFH2 4485 aa7.69□□□□□ -1.18
HERC1-214ENST00000561400 COX6A2Q02221 97 aa7.68□□□□□ -1.18
HERC1-214ENST00000561400 A0A0J9YXV3 536 aa7.68□□□□□ -1.18
HERC1-214ENST00000561400 PSCAO43653 123 aa7.67□□□□□ -1.18
HERC1-214ENST00000561400 TRAV22A0A0B4J277 110 aa7.67□□□□□ -1.18
HERC1-214ENST00000561400 hDV103S1A0JD37 113 aa7.67□□□□□ -1.18
HERC1-214ENST00000561400 A8MU10 97 aa7.67□□□□□ -1.18
HERC1-214ENST00000561400 PSPHP1O15172 72 aa7.67□□□□□ -1.18
HERC1-214ENST00000561400 IGHV3OR16-9A0A0B4J2B5 98 aa7.66□□□□□ -1.18
HERC1-214ENST00000561400 NKAPP1Q8N9T2 125 aa7.66□□□□□ -1.18
HERC1-214ENST00000561400 FAT2Q9NYQ8 4349 aa7.66□□□□□ -1.18
HERC1-214ENST00000561400 LRCOL1A6NCL2 159 aa7.65□□□□□ -1.18
HERC1-214ENST00000561400 LECT2O14960 151 aa7.65□□□□□ -1.18
HERC1-214ENST00000561400 ERC2-IT1O76042 136 aa7.65□□□□□ -1.18
HERC1-214ENST00000561400 TNP2Q05952 138 aa7.65□□□□□ -1.18
HERC1-214ENST00000561400 C16orf90A8MZG2 172 aa7.64□□□□□ -1.19
HERC1-214ENST00000561400 UBE2AP49459 152 aa7.64□□□□□ -1.19
HERC1-214ENST00000561400 CDKN2A-AS1Q9UH64 79 aa7.64□□□□□ -1.19
HERC1-214ENST00000561400 LINC00313P59037 77 aa7.63□□□□□ -1.19
HERC1-214ENST00000561400 IGLV5-45A0A087WSX0 123 aa7.62□□□□□ -1.19
HERC1-214ENST00000561400 C9orf129Q5T035 196 aaKnown RBP7.62□□□□□ -1.19
HERC1-214ENST00000561400 C15orf56Q8N910 161 aa7.62□□□□□ -1.19
HERC1-214ENST00000561400 TMEM254Q8TBM7 123 aa7.62□□□□□ -1.19
HERC1-214ENST00000561400 A0A087WTM6 91 aa7.62□□□□□ -1.19
HERC1-214ENST00000561400 FAM218AQ96MZ4 157 aa7.62□□□□□ -1.19
HERC1-214ENST00000561400 PKD1P98161 4303 aa7.61□□□□□ -1.19
HERC1-214ENST00000561400 DNAH11Q96DT5 4516 aa7.6□□□□□ -1.19
HERC1-214ENST00000561400 PRYO14603 147 aa7.59□□□□□ -1.19
HERC1-214ENST00000561400 SPTSSBQ8NFR3 76 aa7.59□□□□□ -1.19
HERC1-214ENST00000561400 HIGD2BQ4VC39 106 aa7.59□□□□□ -1.19
HERC1-214ENST00000561400 IGHV3-64A0A075B6Q5 118 aa7.58□□□□□ -1.2
HERC1-214ENST00000561400 A0A0A0MQY5 61 aa7.58□□□□□ -1.2
HERC1-214ENST00000561400 SMIM1B2RUZ4 78 aa7.58□□□□□ -1.2
HERC1-214ENST00000561400 CXCL6P80162 114 aa7.58□□□□□ -1.2
HERC1-214ENST00000561400 LINC01554Q52M75 96 aa7.58□□□□□ -1.2
HERC1-214ENST00000561400 Q5VV11 94 aa7.58□□□□□ -1.2
HERC1-214ENST00000561400 Q8N814 137 aa7.58□□□□□ -1.2
HERC1-214ENST00000561400 ZNF625Q96I27 306 aaPredicted RBP7.58□□□□□ -1.2
HERC1-214ENST00000561400 HECTD4Q9Y4D8 3996 aa7.58□□□□□ -1.2
HERC1-214ENST00000561400 LINC00337Q8N6G1 96 aa7.58□□□□□ -1.2
HERC1-214ENST00000561400 UBL5Q9BZL1 73 aa7.58□□□□□ -1.2
HERC1-214ENST00000561400 GVQW2A0A096LPI5 108 aaPredicted RBP7.57□□□□□ -1.2
HERC1-214ENST00000561400 NDUFA12Q9UI09 145 aa7.57□□□□□ -1.2
HERC1-214ENST00000561400 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.56□□□□□ -1.2
HERC1-214ENST00000561400 HCG22E2RYF7 251 aa7.56□□□□□ -1.2
HERC1-214ENST00000561400 SLPIP03973 132 aa7.56□□□□□ -1.2
HERC1-214ENST00000561400 KIAA0087Q14695 138 aa7.56□□□□□ -1.2
HERC1-214ENST00000561400 MP68P56378 58 aa7.55□□□□□ -1.2
HERC1-214ENST00000561400 SPAG11BQ08648 103 aa7.55□□□□□ -1.2
HERC1-214ENST00000561400 C14orf177Q52M58 125 aa7.55□□□□□ -1.2
HERC1-214ENST00000561400 IGLV5-39A0A0G2JS06 123 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms