RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 SONP18583 2426 aaKnown RBP1.62□□□□□ -2.15
SPG11-223ENST00000560858 CHD6Q8TD26 2715 aa1.62□□□□□ -2.15
SPG11-223ENST00000560858 FLNAP21333 2647 aaKnown RBP1.62□□□□□ -2.15
SPG11-223ENST00000560858 TEX15Q9BXT5 2789 aa1.62□□□□□ -2.15
SPG11-223ENST00000560858 ZNF462Q96JM2 2506 aa1.62□□□□□ -2.15
SPG11-223ENST00000560858 ZNF469Q96JG9 3925 aaPredicted RBP1.61□□□□□ -2.15
SPG11-223ENST00000560858 TRAV23DV6A0A075B6W5 121 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 LOC107984640A0A0U1RRK4 108 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 H3BNG1 76 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 H7BZZ5 65 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 M0R2N4 97 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 KRTAP1-4P0C5Y4 121 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 VPREB1P12018 145 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 MIFP14174 115 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 APOC4P55056 127 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 ELOF1P60002 83 aaKnown RBP1.61□□□□□ -2.15
SPG11-223ENST00000560858 DAD1P61803 113 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 PRR3P79522 188 aaKnown RBP1.61□□□□□ -2.15
SPG11-223ENST00000560858 CXCL6P80162 114 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 KLKP1Q107X0 134 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 DEFB135Q30KP9 77 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 C9orf116Q5BN46 136 aaPredicted RBP1.61□□□□□ -2.15
SPG11-223ENST00000560858 KRTAP26-1Q6PEX3 210 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 ENHOQ6UWT2 76 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 UNQ6190/PRO20217Q6UXQ8 127 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 Q6ZQY7 126 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 Q6ZVQ6 151 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 FAM19A5Q7Z5A7 132 aaPredicted RBP1.61□□□□□ -2.15
SPG11-223ENST00000560858 FAM19A1Q7Z5A9 133 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 DPH3Q96FX2 82 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 C6orf48Q9UBA6 75 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 MYO18BQ8IUG5 2567 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 EPG5Q9HCE0 2579 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 APCP25054 2843 aa1.61□□□□□ -2.15
SPG11-223ENST00000560858 FN1P02751 2386 aaKnown RBP1.61□□□□□ -2.15
SPG11-223ENST00000560858 ABCA12Q86UK0 2595 aa1.6□□□□□ -2.15
SPG11-223ENST00000560858 IGLV10-54A0A075B6I4 117 aa1.6□□□□□ -2.15
SPG11-223ENST00000560858 A0A096LPF7 62 aa1.6□□□□□ -2.15
SPG11-223ENST00000560858 FAM236DA0A1B0GTK5 79 aa1.6□□□□□ -2.15
SPG11-223ENST00000560858 F8WDY8 70 aa1.6□□□□□ -2.15
SPG11-223ENST00000560858 ZNF73O43830 326 aaPredicted RBP1.6□□□□□ -2.15
SPG11-223ENST00000560858 FAM236CP0DP71 79 aa1.6□□□□□ -2.15
SPG11-223ENST00000560858 COX7BP24311 80 aa1.6□□□□□ -2.15
SPG11-223ENST00000560858 ATP5EP56381 51 aaPredicted RBP1.6□□□□□ -2.15
SPG11-223ENST00000560858 RBM3P98179 157 aaKnown RBP1.6□□□□□ -2.15
SPG11-223ENST00000560858 EGFEM1PQ0D2K5 195 aa1.6□□□□□ -2.15
SPG11-223ENST00000560858 C5orf47Q569G3 176 aa1.6□□□□□ -2.15
SPG11-223ENST00000560858 Q5XG85 94 aa1.6□□□□□ -2.15
SPG11-223ENST00000560858 C15orf56Q8N910 161 aa1.6□□□□□ -2.15
SPG11-223ENST00000560858 DSCR8Q96T75 97 aa1.6□□□□□ -2.15
SPG11-223ENST00000560858 KMT2BQ9UMN6 2715 aaPredicted RBP1.6□□□□□ -2.15
SPG11-223ENST00000560858 PDZD2O15018 2839 aa1.59□□□□□ -2.15
SPG11-223ENST00000560858 M0R378 163 aa1.59□□□□□ -2.15
SPG11-223ENST00000560858 ERC2-IT1O76042 136 aa1.59□□□□□ -2.15
SPG11-223ENST00000560858 SPART-AS1P0CW21 52 aa1.59□□□□□ -2.15
SPG11-223ENST00000560858 C20orf197Q8N268 126 aa1.59□□□□□ -2.15
SPG11-223ENST00000560858 WFDC9Q8NEX5 89 aa1.59□□□□□ -2.15
SPG11-223ENST00000560858 LAMTOR3Q9UHA4 124 aa1.59□□□□□ -2.15
SPG11-223ENST00000560858 KLK12Q9UKR0 248 aa1.59□□□□□ -2.15
SPG11-223ENST00000560858 SERP1Q9Y6X1 66 aa1.59□□□□□ -2.15
SPG11-223ENST00000560858 MAP1AP78559 2803 aaPredicted RBP1.59□□□□□ -2.16
SPG11-223ENST00000560858 CCDC168Q8NDH2 2452 aa1.59□□□□□ -2.16
SPG11-223ENST00000560858 DNAH3Q8TD57 4116 aa1.59□□□□□ -2.16
SPG11-223ENST00000560858 ZFYVE26Q68DK2 2539 aa1.59□□□□□ -2.16
SPG11-223ENST00000560858 CSMD2Q7Z408 3487 aa1.59□□□□□ -2.16
SPG11-223ENST00000560858 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 A0A087X002 238 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 TRAV10A0A0B4J240 114 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 A0A1B0GW54 56 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 DEFB4AO15263 64 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 NDUFC1O43677 76 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 IGKV4-1P06312 121 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 TLX1NBP0CAT3 122 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 SEC61BP60468 96 aaKnown RBP1.58□□□□□ -2.16
SPG11-223ENST00000560858 NREPQ16612 68 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 LINC01556Q5JQF7 62 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 Q6ZRU5 148 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 WFDC10BQ8IUB3 73 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 CAMK2N2Q96S95 79 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 XAGE1AQ9HD64 81 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 HIVEP2P31629 2446 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 NBPF19A0A087WUL8 3843 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 MTORP42345 2549 aa1.58□□□□□ -2.16
SPG11-223ENST00000560858 ACANP16112 2415 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 IGLV5-48A0A075B6I7 105 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 A0A0U1RQV1 116 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 LCE6AA0A183 80 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 F8WEM9 126 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 KRTAP4-16G5E9R7 235 aaPredicted RBP1.57□□□□□ -2.16
SPG11-223ENST00000560858 HTN3P15516 51 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 SPRR1AP35321 89 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 HAMPP81172 84 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 HIGD2BQ4VC39 106 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 KPRPQ5T749 579 aaPredicted RBP1.57□□□□□ -2.16
SPG11-223ENST00000560858 PP632Q6XCG6 107 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 Q6ZRP5 223 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 RMI2Q96E14 147 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 TM2D3Q9BRN9 247 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 OCR1Q9BZK8 76 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 KCNQ1DNQ9H478 68 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms