RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 SRSF9Q13242 221 aaKnown RBP eCLIP4.87□□□□□ -1.63
LRRC28-219ENST00000560483 S100A7L2Q5SY68 101 aa4.87□□□□□ -1.63
LRRC28-219ENST00000560483 IGLV1-50A0A075B6I6 118 aa4.86□□□□□ -1.63
LRRC28-219ENST00000560483 PRLHP81277 87 aa4.86□□□□□ -1.63
LRRC28-219ENST00000560483 HIST3H2BBQ8N257 126 aa4.86□□□□□ -1.63
LRRC28-219ENST00000560483 LINC01600Q96MT4 127 aa4.86□□□□□ -1.63
LRRC28-219ENST00000560483 TMEM126AQ9H061 195 aa4.86□□□□□ -1.63
LRRC28-219ENST00000560483 ETDCA0A1B0GVM5 59 aa4.85□□□□□ -1.63
LRRC28-219ENST00000560483 Q8NDZ9 215 aa4.85□□□□□ -1.63
LRRC28-219ENST00000560483 OR13C6PQ8NH95 151 aa4.85□□□□□ -1.63
LRRC28-219ENST00000560483 HIST1H2BLQ99880 126 aa4.85□□□□□ -1.63
LRRC28-219ENST00000560483 HIGD2AQ9BW72 106 aa4.85□□□□□ -1.63
LRRC28-219ENST00000560483 TTTY13Q9BZ97 58 aa4.85□□□□□ -1.63
LRRC28-219ENST00000560483 IGKV2D-26A0A0A0MRZ7 120 aa4.84□□□□□ -1.63
LRRC28-219ENST00000560483 DDTP30046 118 aa4.84□□□□□ -1.63
LRRC28-219ENST00000560483 PRR26Q8N8Z3 221 aa4.84□□□□□ -1.63
LRRC28-219ENST00000560483 SPANXB1Q9NS25 103 aaPredicted RBP4.84□□□□□ -1.63
LRRC28-219ENST00000560483 TRBV10-3A0A0K0K1G6 114 aa4.83□□□□□ -1.64
LRRC28-219ENST00000560483 PRYO14603 147 aa4.83□□□□□ -1.64
LRRC28-219ENST00000560483 ADAMTSL4-AS1Q5T5F5 129 aa4.83□□□□□ -1.64
LRRC28-219ENST00000560483 COPS9Q8WXC6 57 aa4.82□□□□□ -1.64
LRRC28-219ENST00000560483 TIMM17BO60830 172 aa4.81□□□□□ -1.64
LRRC28-219ENST00000560483 MT1HL1P0DM35 61 aa4.81□□□□□ -1.64
LRRC28-219ENST00000560483 RPL13AP40429 203 aaKnown RBP4.81□□□□□ -1.64
LRRC28-219ENST00000560483 HINT1P49773 126 aaPredicted RBP4.81□□□□□ -1.64
LRRC28-219ENST00000560483 PCP2Q8IVA1 136 aa4.81□□□□□ -1.64
LRRC28-219ENST00000560483 LINC00308Q8TCZ7 52 aa4.81□□□□□ -1.64
LRRC28-219ENST00000560483 TRAV23DV6A0A075B6W5 121 aa4.8□□□□□ -1.64
LRRC28-219ENST00000560483 TRBV10-2A0A0K0K1G8 114 aa4.8□□□□□ -1.64
LRRC28-219ENST00000560483 NDUFC2O95298 119 aa4.8□□□□□ -1.64
LRRC28-219ENST00000560483 CRYGAP11844 174 aa4.8□□□□□ -1.64
LRRC28-219ENST00000560483 SOSTDC1Q6X4U4 206 aa4.8□□□□□ -1.64
LRRC28-219ENST00000560483 SPANXCQ9NY87 97 aa4.8□□□□□ -1.64
LRRC28-219ENST00000560483 ANAPC11Q9NYG5 84 aa4.8□□□□□ -1.64
LRRC28-219ENST00000560483 CBY1Q9Y3M2 126 aa4.8□□□□□ -1.64
LRRC28-219ENST00000560483 TNXBP22105 4242 aa4.8□□□□□ -1.64
LRRC28-219ENST00000560483 C5orf52A6NGY3 159 aa4.79□□□□□ -1.64
LRRC28-219ENST00000560483 TYMSOSQ8TAI1 123 aa4.79□□□□□ -1.64
LRRC28-219ENST00000560483 KCNQ1DNQ9H478 68 aa4.79□□□□□ -1.64
LRRC28-219ENST00000560483 ZNF706Q9Y5V0 76 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-219ENST00000560483 LOC107984156A0A0G2JMH3 177 aa4.78□□□□□ -1.64
LRRC28-219ENST00000560483 A6NDN8 102 aa4.78□□□□□ -1.64
LRRC28-219ENST00000560483 JOSD1Q15040 202 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-219ENST00000560483 ARL17AQ8IVW1 177 aa4.78□□□□□ -1.64
LRRC28-219ENST00000560483 LINC00518Q8N0U6 118 aa4.78□□□□□ -1.64
LRRC28-219ENST00000560483 LINC00337Q8N6G1 96 aa4.78□□□□□ -1.64
LRRC28-219ENST00000560483 PPDPFQ9H3Y8 114 aa4.78□□□□□ -1.64
LRRC28-219ENST00000560483 ZNF73O43830 326 aaPredicted RBP4.77□□□□□ -1.65
LRRC28-219ENST00000560483 TSPAN13O95857 204 aa4.77□□□□□ -1.65
LRRC28-219ENST00000560483 KRTAP1-4P0C5Y4 121 aa4.77□□□□□ -1.65
LRRC28-219ENST00000560483 IFITM1P13164 125 aa4.77□□□□□ -1.65
LRRC28-219ENST00000560483 KRTAP10-8P60410 259 aa4.77□□□□□ -1.65
LRRC28-219ENST00000560483 MUSTN1Q8IVN3 82 aa4.77□□□□□ -1.65
LRRC28-219ENST00000560483 SMCR5Q8TEV8 140 aa4.77□□□□□ -1.65
LRRC28-219ENST00000560483 LITAFQ99732 161 aa4.77□□□□□ -1.65
LRRC28-219ENST00000560483 SPANXDQ9BXN6 97 aa4.77□□□□□ -1.65
LRRC28-219ENST00000560483 PAM16Q9Y3D7 125 aa4.77□□□□□ -1.65
LRRC28-219ENST00000560483 IGLV6-57P01721 117 aa4.76□□□□□ -1.65
LRRC28-219ENST00000560483 GAGE2AQ6NT46 116 aa4.76□□□□□ -1.65
LRRC28-219ENST00000560483 Q6ZVH6 145 aa4.76□□□□□ -1.65
LRRC28-219ENST00000560483 KRTAP13-1Q8IUC0 172 aa4.76□□□□□ -1.65
LRRC28-219ENST00000560483 VAMP8Q9BV40 100 aa4.76□□□□□ -1.65
LRRC28-219ENST00000560483 A0A087X002 238 aa4.75□□□□□ -1.65
LRRC28-219ENST00000560483 B5MCH6 92 aa4.75□□□□□ -1.65
LRRC28-219ENST00000560483 SPATA45Q537H7 98 aa4.75□□□□□ -1.65
LRRC28-219ENST00000560483 HIST1H4GQ99525 98 aa4.75□□□□□ -1.65
LRRC28-219ENST00000560483 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
LRRC28-219ENST00000560483 SPRR1AP35321 89 aa4.74□□□□□ -1.65
LRRC28-219ENST00000560483 PCP4P48539 62 aa4.74□□□□□ -1.65
LRRC28-219ENST00000560483 FAM229BQ4G0N7 80 aa4.74□□□□□ -1.65
LRRC28-219ENST00000560483 Q6ZRX8 168 aa4.74□□□□□ -1.65
LRRC28-219ENST00000560483 C14orf144Q96I85 54 aa4.74□□□□□ -1.65
LRRC28-219ENST00000560483 SPRR4Q96PI1 79 aa4.74□□□□□ -1.65
LRRC28-219ENST00000560483 IGLV9-49A0A0B4J1Y8 123 aa4.73□□□□□ -1.65
LRRC28-219ENST00000560483 TRAV13-2A0A0B4J235 113 aa4.73□□□□□ -1.65
LRRC28-219ENST00000560483 COX7BP24311 80 aa4.73□□□□□ -1.65
LRRC28-219ENST00000560483 PRR4Q16378 134 aa4.73□□□□□ -1.65
LRRC28-219ENST00000560483 C6orf99Q4VX62 202 aa4.73□□□□□ -1.65
LRRC28-219ENST00000560483 C12orf57Q99622 126 aa4.73□□□□□ -1.65
LRRC28-219ENST00000560483 COX8AP10176 69 aa4.72□□□□□ -1.65
LRRC28-219ENST00000560483 C9orf153Q5TBE3 101 aa4.72□□□□□ -1.65
LRRC28-219ENST00000560483 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.72□□□□□ -1.65
LRRC28-219ENST00000560483 LINC00304Q8N9R0 145 aa4.72□□□□□ -1.65
LRRC28-219ENST00000560483 HMCN2Q8NDA2 5059 aa4.72□□□□□ -1.65
LRRC28-219ENST00000560483 KRTAP4-16G5E9R7 235 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-219ENST00000560483 ERC2-IT1O76042 136 aa4.71□□□□□ -1.66
LRRC28-219ENST00000560483 SLC25A34Q6PIV7 304 aa4.71□□□□□ -1.66
LRRC28-219ENST00000560483 C3orf22Q8N5N4 141 aa4.71□□□□□ -1.66
LRRC28-219ENST00000560483 DEFB105AQ8NG35 78 aa4.71□□□□□ -1.66
LRRC28-219ENST00000560483 Q9BRP9 147 aa4.71□□□□□ -1.66
LRRC28-219ENST00000560483 DHRS4-AS1Q9P1J3 65 aa4.71□□□□□ -1.66
LRRC28-219ENST00000560483 H7C2G1 150 aa4.7□□□□□ -1.66
LRRC28-219ENST00000560483 CTAG1AP78358 180 aa4.7□□□□□ -1.66
LRRC28-219ENST00000560483 MOBPQ13875 183 aa4.7□□□□□ -1.66
LRRC28-219ENST00000560483 VAMP3Q15836 100 aa4.7□□□□□ -1.66
LRRC28-219ENST00000560483 TAL2Q16559 108 aa4.7□□□□□ -1.66
LRRC28-219ENST00000560483 KRTAP13-2Q52LG2 175 aa4.7□□□□□ -1.66
LRRC28-219ENST00000560483 RAB37Q96AX2 223 aa4.7□□□□□ -1.66
LRRC28-219ENST00000560483 SLC25A20O43772 301 aa4.69□□□□□ -1.66
LRRC28-219ENST00000560483 Q1RN00 199 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms