RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 TCL1BO95988 128 aa5.44□□□□□ -1.54
TRAF3-209ENST00000560463 UBE2V1Q13404 147 aa5.44□□□□□ -1.54
TRAF3-209ENST00000560463 ATXN8Q156A1 80 aa5.44□□□□□ -1.54
TRAF3-209ENST00000560463 DIRC1Q969H9 104 aa5.44□□□□□ -1.54
TRAF3-209ENST00000560463 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.44□□□□□ -1.54
TRAF3-209ENST00000560463 A0A087WYN8 130 aa5.43□□□□□ -1.54
TRAF3-209ENST00000560463 A0A1B0GX51 115 aa5.43□□□□□ -1.54
TRAF3-209ENST00000560463 PANO1I0J062 215 aa5.43□□□□□ -1.54
TRAF3-209ENST00000560463 LST1O00453 97 aa5.43□□□□□ -1.54
TRAF3-209ENST00000560463 SNCGO76070 127 aa5.43□□□□□ -1.54
TRAF3-209ENST00000560463 FUSP35637 526 aaKnown RBP eCLIP5.43□□□□□ -1.54
TRAF3-209ENST00000560463 C6orf99Q4VX62 202 aa5.43□□□□□ -1.54
TRAF3-209ENST00000560463 LINC00528Q8N1L1 170 aa5.43□□□□□ -1.54
TRAF3-209ENST00000560463 PLAC8Q9NZF1 115 aa5.43□□□□□ -1.54
TRAF3-209ENST00000560463 PKHD1P08F94 4074 aa5.43□□□□□ -1.54
TRAF3-209ENST00000560463 RPL37AP8A6NKH3 93 aa5.42□□□□□ -1.54
TRAF3-209ENST00000560463 SPRR1AP35321 89 aa5.42□□□□□ -1.54
TRAF3-209ENST00000560463 SMCPP49901 116 aaPredicted RBP5.42□□□□□ -1.54
TRAF3-209ENST00000560463 CLEC2BQ92478 149 aa5.42□□□□□ -1.54
TRAF3-209ENST00000560463 A0A1B0GVY2 172 aa5.41□□□□□ -1.54
TRAF3-209ENST00000560463 H3BMG7 143 aa5.41□□□□□ -1.54
TRAF3-209ENST00000560463 TRACP01848 142 aa5.41□□□□□ -1.54
TRAF3-209ENST00000560463 ELOF1P60002 83 aaKnown RBP5.41□□□□□ -1.54
TRAF3-209ENST00000560463 UBE2BP63146 152 aa5.41□□□□□ -1.54
TRAF3-209ENST00000560463 REG3GQ6UW15 175 aa5.41□□□□□ -1.54
TRAF3-209ENST00000560463 Q6ZSA8 131 aa5.41□□□□□ -1.54
TRAF3-209ENST00000560463 PHF5AQ7RTV0 110 aaKnown RBP5.41□□□□□ -1.54
TRAF3-209ENST00000560463 ETDCA0A1B0GVM5 59 aa5.4□□□□□ -1.54
TRAF3-209ENST00000560463 KRTAP4-16G5E9R7 235 aaPredicted RBP5.4□□□□□ -1.54
TRAF3-209ENST00000560463 SLC25A20O43772 301 aa5.4□□□□□ -1.54
TRAF3-209ENST00000560463 INAFM2P0DMQ5 153 aa5.4□□□□□ -1.54
TRAF3-209ENST00000560463 COX7BP24311 80 aa5.4□□□□□ -1.54
TRAF3-209ENST00000560463 F8W1H4 67 aa5.39□□□□□ -1.55
TRAF3-209ENST00000560463 DNAL4O96015 105 aa5.39□□□□□ -1.55
TRAF3-209ENST00000560463 KRTAP10-1P60331 282 aa5.39□□□□□ -1.55
TRAF3-209ENST00000560463 LINC00575Q6W349 94 aa5.39□□□□□ -1.55
TRAF3-209ENST00000560463 FAM218AQ96MZ4 157 aa5.39□□□□□ -1.55
TRAF3-209ENST00000560463 hADV29S1A0JD25 119 aa5.38□□□□□ -1.55
TRAF3-209ENST00000560463 B5MCH6 92 aa5.38□□□□□ -1.55
TRAF3-209ENST00000560463 Q6ZRX8 168 aa5.38□□□□□ -1.55
TRAF3-209ENST00000560463 DHRS4-AS1Q9P1J3 65 aa5.38□□□□□ -1.55
TRAF3-209ENST00000560463 H0Y9J4 135 aa5.37□□□□□ -1.55
TRAF3-209ENST00000560463 GHRHP01286 108 aa5.37□□□□□ -1.55
TRAF3-209ENST00000560463 OCIAD2Q56VL3 154 aa5.37□□□□□ -1.55
TRAF3-209ENST00000560463 CIRBP-AS1Q8TBR5 109 aa5.37□□□□□ -1.55
TRAF3-209ENST00000560463 FAM30AQ9NZY2 134 aa5.37□□□□□ -1.55
TRAF3-209ENST00000560463 C9JAW5 83 aa5.36□□□□□ -1.55
TRAF3-209ENST00000560463 H3BQ85 93 aa5.36□□□□□ -1.55
TRAF3-209ENST00000560463 H3BT86 120 aa5.36□□□□□ -1.55
TRAF3-209ENST00000560463 SCXQ7RTU7 201 aa5.36□□□□□ -1.55
TRAF3-209ENST00000560463 LINC01600Q96MT4 127 aa5.36□□□□□ -1.55
TRAF3-209ENST00000560463 LRP1BQ9NZR2 4599 aa5.36□□□□□ -1.55
TRAF3-209ENST00000560463 BCE1O60756 84 aa5.35□□□□□ -1.55
TRAF3-209ENST00000560463 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.35□□□□□ -1.55
TRAF3-209ENST00000560463 FAM19A1Q7Z5A9 133 aa5.35□□□□□ -1.55
TRAF3-209ENST00000560463 ORMDL1Q9P0S3 153 aa5.35□□□□□ -1.55
TRAF3-209ENST00000560463 PRO0461Q9UI25 63 aa5.35□□□□□ -1.55
TRAF3-209ENST00000560463 RYR3Q15413 4870 aa5.34□□□□□ -1.55
TRAF3-209ENST00000560463 KRTAP11-1Q8IUC1 163 aa5.34□□□□□ -1.55
TRAF3-209ENST00000560463 ANKRD29Q8N6D5 301 aa5.34□□□□□ -1.55
TRAF3-209ENST00000560463 DYNC1H1Q14204 4646 aaKnown RBP5.34□□□□□ -1.55
TRAF3-209ENST00000560463 TMEM256-PLSCR3K7ERE1 68 aa5.33□□□□□ -1.56
TRAF3-209ENST00000560463 BAALC-AS2P0C853 105 aa5.33□□□□□ -1.56
TRAF3-209ENST00000560463 Q9BRP9 147 aa5.33□□□□□ -1.56
TRAF3-209ENST00000560463 PSORS1C2Q9UIG4 136 aa5.33□□□□□ -1.56
TRAF3-209ENST00000560463 UBE2AP49459 152 aa5.32□□□□□ -1.56
TRAF3-209ENST00000560463 Q6ZQY7 126 aa5.32□□□□□ -1.56
TRAF3-209ENST00000560463 PPDPFLQ8WWR9 84 aa5.32□□□□□ -1.56
TRAF3-209ENST00000560463 SRRM2Q9UQ35 2752 aaKnown RBP5.31□□□□□ -1.56
TRAF3-209ENST00000560463 PRLHP81277 87 aa5.31□□□□□ -1.56
TRAF3-209ENST00000560463 KRTAP13-1Q8IUC0 172 aa5.31□□□□□ -1.56
TRAF3-209ENST00000560463 MTURNQ8N3F0 131 aa5.31□□□□□ -1.56
TRAF3-209ENST00000560463 SMCR5Q8TEV8 140 aa5.31□□□□□ -1.56
TRAF3-209ENST00000560463 VPS13BQ7Z7G8 4022 aa5.31□□□□□ -1.56
TRAF3-209ENST00000560463 APOBP04114 4563 aaKnown RBP5.3□□□□□ -1.56
TRAF3-209ENST00000560463 C1orf137Q5JT78 98 aa5.3□□□□□ -1.56
TRAF3-209ENST00000560463 TEN1Q86WV5 123 aa5.3□□□□□ -1.56
TRAF3-209ENST00000560463 ZNF861PO60384 105 aa5.29□□□□□ -1.56
TRAF3-209ENST00000560463 HIGD2AQ9BW72 106 aa5.29□□□□□ -1.56
TRAF3-209ENST00000560463 IGLV5-48A0A075B6I7 105 aa5.28□□□□□ -1.56
TRAF3-209ENST00000560463 IGLV7-43P04211 117 aa5.28□□□□□ -1.56
TRAF3-209ENST00000560463 XGP55808 180 aa5.28□□□□□ -1.56
TRAF3-209ENST00000560463 ETDBQ3ZM63 59 aa5.28□□□□□ -1.56
TRAF3-209ENST00000560463 TEX49A0A1B0GTD5 131 aa5.27□□□□□ -1.57
TRAF3-209ENST00000560463 JMJD7-PLA2G4BH0Y9G9 81 aa5.27□□□□□ -1.57
TRAF3-209ENST00000560463 ERC2-IT1O76042 136 aa5.27□□□□□ -1.57
TRAF3-209ENST00000560463 LINC01547P58512 204 aaPredicted RBP5.26□□□□□ -1.57
TRAF3-209ENST00000560463 HAMPP81172 84 aa5.26□□□□□ -1.57
TRAF3-209ENST00000560463 Q8N377 158 aa5.26□□□□□ -1.57
TRAF3-209ENST00000560463 ZNF706Q9Y5V0 76 aaPredicted RBP5.26□□□□□ -1.57
TRAF3-209ENST00000560463 LCE2BO14633 110 aa5.25□□□□□ -1.57
TRAF3-209ENST00000560463 CDK2AP2O75956 126 aa5.25□□□□□ -1.57
TRAF3-209ENST00000560463 SPRR1BP22528 89 aa5.25□□□□□ -1.57
TRAF3-209ENST00000560463 NDUFV3P56181 108 aaKnown RBP5.25□□□□□ -1.57
TRAF3-209ENST00000560463 ST20-AS1Q8NBB2 130 aa5.25□□□□□ -1.57
TRAF3-209ENST00000560463 DEFB105AQ8NG35 78 aa5.25□□□□□ -1.57
TRAF3-209ENST00000560463 OBSCN-AS1Q96MR7 158 aa5.25□□□□□ -1.57
TRAF3-209ENST00000560463 LAMTOR3Q9UHA4 124 aa5.25□□□□□ -1.57
TRAF3-209ENST00000560463 C21orf62-AS1Q17RA5 79 aa5.24□□□□□ -1.57
TRAF3-209ENST00000560463 J3QR89 54 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms