RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 PEA15Q15121 130 aa3.23□□□□□ -1.89
HERC1-208ENST00000560462 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
HERC1-208ENST00000560462 SPANXA1Q9NS26 97 aa3.23□□□□□ -1.89
HERC1-208ENST00000560462 PRO0628Q9UI54 55 aa3.23□□□□□ -1.89
HERC1-208ENST00000560462 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
HERC1-208ENST00000560462 TGIF2-C20orf24A0A0A6YYL0 155 aa3.22□□□□□ -1.89
HERC1-208ENST00000560462 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
HERC1-208ENST00000560462 C20orf202A1L168 122 aa3.22□□□□□ -1.89
HERC1-208ENST00000560462 BPY2O14599 106 aa3.22□□□□□ -1.89
HERC1-208ENST00000560462 NDUFA1O15239 70 aa3.22□□□□□ -1.89
HERC1-208ENST00000560462 PPBPP02775 128 aa3.22□□□□□ -1.89
HERC1-208ENST00000560462 IFI27P40305 119 aaPredicted RBP3.22□□□□□ -1.89
HERC1-208ENST00000560462 MRPS36P82909 103 aaKnown RBP3.22□□□□□ -1.89
HERC1-208ENST00000560462 ATP5L2Q7Z4Y8 100 aa3.22□□□□□ -1.89
HERC1-208ENST00000560462 ORMDL3Q8N138 153 aa3.22□□□□□ -1.89
HERC1-208ENST00000560462 PRELID3AQ96N28 172 aa3.22□□□□□ -1.89
HERC1-208ENST00000560462 SMDT1Q9H4I9 107 aa3.22□□□□□ -1.89
HERC1-208ENST00000560462 MRPL35Q9NZE8 188 aaKnown RBP3.22□□□□□ -1.89
HERC1-208ENST00000560462 TLX1NBP0CAT3 122 aa3.21□□□□□ -1.9
HERC1-208ENST00000560462 KRTAP13-1Q8IUC0 172 aa3.21□□□□□ -1.9
HERC1-208ENST00000560462 SPANXB1Q9NS25 103 aaPredicted RBP3.21□□□□□ -1.9
HERC1-208ENST00000560462 C6orf48Q9UBA6 75 aa3.21□□□□□ -1.9
HERC1-208ENST00000560462 NDUFC2-KCTD14E9PQ53 114 aa3.2□□□□□ -1.9
HERC1-208ENST00000560462 RPS29P62273 56 aaKnown RBP3.2□□□□□ -1.9
HERC1-208ENST00000560462 PMVKQ15126 192 aa3.2□□□□□ -1.9
HERC1-208ENST00000560462 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
HERC1-208ENST00000560462 UNQ6190/PRO20217Q6UXQ8 127 aa3.2□□□□□ -1.9
HERC1-208ENST00000560462 TMEM136Q6ZRR5 245 aa3.2□□□□□ -1.9
HERC1-208ENST00000560462 TMEM141Q96I45 108 aa3.2□□□□□ -1.9
HERC1-208ENST00000560462 MAP1LC3AQ9H492 121 aa3.2□□□□□ -1.9
HERC1-208ENST00000560462 TP73-AS1Q9UF72 201 aa3.2□□□□□ -1.9
HERC1-208ENST00000560462 LOC389332A0A1B0GUA5 103 aa3.19□□□□□ -1.9
HERC1-208ENST00000560462 RPL37P61927 97 aaKnown RBP3.19□□□□□ -1.9
HERC1-208ENST00000560462 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
HERC1-208ENST00000560462 C2orf88Q9BSF0 95 aa3.19□□□□□ -1.9
HERC1-208ENST00000560462 CYSLTR1Q9Y271 337 aa3.19□□□□□ -1.9
HERC1-208ENST00000560462 LAMTOR2Q9Y2Q5 125 aa3.19□□□□□ -1.9
HERC1-208ENST00000560462 C22orf24Q9Y442 160 aa3.19□□□□□ -1.9
HERC1-208ENST00000560462 TRBV30A0A0K0K1B3 111 aa3.18□□□□□ -1.9
HERC1-208ENST00000560462 C2orf82Q6UX34 121 aa3.18□□□□□ -1.9
HERC1-208ENST00000560462 Q8N8P6 123 aa3.18□□□□□ -1.9
HERC1-208ENST00000560462 PACRGQ96M98 296 aaPredicted RBP3.18□□□□□ -1.9
HERC1-208ENST00000560462 C20orf166-AS1Q96NR2 134 aa3.18□□□□□ -1.9
HERC1-208ENST00000560462 C8orf17Q9NRJ1 99 aa3.18□□□□□ -1.9
HERC1-208ENST00000560462 TOMM7Q9P0U1 55 aa3.18□□□□□ -1.9
HERC1-208ENST00000560462 MT-ND4LP03901 98 aa3.17□□□□□ -1.9
HERC1-208ENST00000560462 AMELXQ99217 191 aa3.17□□□□□ -1.9
HERC1-208ENST00000560462 NXT2Q9NPJ8 142 aaKnown RBP3.17□□□□□ -1.9
HERC1-208ENST00000560462 A0A096LNJ9 63 aa3.16□□□□□ -1.9
HERC1-208ENST00000560462 K7EMI3 77 aa3.16□□□□□ -1.9
HERC1-208ENST00000560462 CKS1BP61024 79 aa3.16□□□□□ -1.9
HERC1-208ENST00000560462 RAB14P61106 215 aa3.16□□□□□ -1.9
HERC1-208ENST00000560462 FAM19A3Q7Z5A8 133 aa3.16□□□□□ -1.9
HERC1-208ENST00000560462 Q8IZM0 81 aa3.16□□□□□ -1.9
HERC1-208ENST00000560462 TMEM223A0PJW6 202 aa3.15□□□□□ -1.91
HERC1-208ENST00000560462 IGIPA6NJ69 53 aa3.15□□□□□ -1.91
HERC1-208ENST00000560462 IGLV6-57P01721 117 aa3.15□□□□□ -1.91
HERC1-208ENST00000560462 ADCYAP1P18509 176 aa3.15□□□□□ -1.91
HERC1-208ENST00000560462 HERVK_113P63121 156 aa3.15□□□□□ -1.91
HERC1-208ENST00000560462 SEC11AP67812 179 aa3.15□□□□□ -1.91
HERC1-208ENST00000560462 TOMM6Q96B49 74 aa3.15□□□□□ -1.91
HERC1-208ENST00000560462 PLEKHB2Q96CS7 222 aa3.15□□□□□ -1.91
HERC1-208ENST00000560462 XAGE1AQ9HD64 81 aa3.15□□□□□ -1.91
HERC1-208ENST00000560462 CDKN2A-AS1Q9UH64 79 aa3.15□□□□□ -1.91
HERC1-208ENST00000560462 F8VRH5 84 aa3.14□□□□□ -1.91
HERC1-208ENST00000560462 SCO1O75880 301 aa3.14□□□□□ -1.91
HERC1-208ENST00000560462 PDZD11Q5EBL8 140 aa3.14□□□□□ -1.91
HERC1-208ENST00000560462 CLLU1Q5K131 121 aa3.14□□□□□ -1.91
HERC1-208ENST00000560462 TRAV9-1A0A075B6T8 112 aa3.13□□□□□ -1.91
HERC1-208ENST00000560462 G0S2P27469 103 aa3.13□□□□□ -1.91
HERC1-208ENST00000560462 PRLHP81277 87 aa3.13□□□□□ -1.91
HERC1-208ENST00000560462 COX19Q49B96 90 aa3.13□□□□□ -1.91
HERC1-208ENST00000560462 COX7B2Q8TF08 81 aa3.13□□□□□ -1.91
HERC1-208ENST00000560462 SCGB3A1Q96QR1 104 aa3.13□□□□□ -1.91
HERC1-208ENST00000560462 LOC105371267A0A1B0GV96 52 aa3.12□□□□□ -1.91
HERC1-208ENST00000560462 TINCRA0A1B0GVN0 87 aa3.12□□□□□ -1.91
HERC1-208ENST00000560462 SPINK8P0C7L1 97 aa3.12□□□□□ -1.91
HERC1-208ENST00000560462 S100PP25815 95 aa3.12□□□□□ -1.91
HERC1-208ENST00000560462 DEFB116Q30KQ4 102 aa3.12□□□□□ -1.91
HERC1-208ENST00000560462 TMEM218A2RU14 115 aa3.11□□□□□ -1.91
HERC1-208ENST00000560462 LINC01546A6NGU7 62 aa3.11□□□□□ -1.91
HERC1-208ENST00000560462 LINC01549A6NIU2 74 aa3.11□□□□□ -1.91
HERC1-208ENST00000560462 IFITM2Q01629 132 aa3.11□□□□□ -1.91
HERC1-208ENST00000560462 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
HERC1-208ENST00000560462 FA2HQ7L5A8 372 aa3.11□□□□□ -1.91
HERC1-208ENST00000560462 YPEL4Q96NS1 127 aa3.11□□□□□ -1.91
HERC1-208ENST00000560462 SEC11CQ9BY50 192 aa3.11□□□□□ -1.91
HERC1-208ENST00000560462 GNB1LQ9BYB4 327 aa3.11□□□□□ -1.91
HERC1-208ENST00000560462 SMCO4Q9NRQ5 59 aa3.11□□□□□ -1.91
HERC1-208ENST00000560462 RAB5BP61020 215 aa3.1□□□□□ -1.91
HERC1-208ENST00000560462 COMMD7Q86VX2 200 aa3.1□□□□□ -1.91
HERC1-208ENST00000560462 LINC00167Q96N53 147 aa3.1□□□□□ -1.91
HERC1-208ENST00000560462 SPRR4Q96PI1 79 aa3.1□□□□□ -1.91
HERC1-208ENST00000560462 CST9LQ9H4G1 147 aa3.1□□□□□ -1.91
HERC1-208ENST00000560462 RBM12B-AS1Q9P1G2 102 aa3.1□□□□□ -1.91
HERC1-208ENST00000560462 IGKV2-28A0A075B6P5 120 aa3.09□□□□□ -1.91
HERC1-208ENST00000560462 H3BRM9 83 aa3.09□□□□□ -1.91
HERC1-208ENST00000560462 IGKV2D-28P01615 120 aa3.09□□□□□ -1.91
HERC1-208ENST00000560462 IGLC3P0DOY3 106 aa3.09□□□□□ -1.91
HERC1-208ENST00000560462 ZNF22P17026 224 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms