RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 C20orf202A1L168 122 aa7.66□□□□□ -1.18
SMAD3-213ENST00000560175 NPC2P61916 151 aa7.66□□□□□ -1.18
SMAD3-213ENST00000560175 Q6ZRX8 168 aa7.66□□□□□ -1.18
SMAD3-213ENST00000560175 C3orf22Q8N5N4 141 aa7.66□□□□□ -1.18
SMAD3-213ENST00000560175 LINC00304Q8N9R0 145 aa7.66□□□□□ -1.18
SMAD3-213ENST00000560175 ERC2-IT1O76042 136 aa7.65□□□□□ -1.18
SMAD3-213ENST00000560175 TSPAN13O95857 204 aa7.65□□□□□ -1.18
SMAD3-213ENST00000560175 S100A7L2Q5SY68 101 aa7.65□□□□□ -1.18
SMAD3-213ENST00000560175 HIST1H2BLQ99880 126 aa7.65□□□□□ -1.18
SMAD3-213ENST00000560175 SPANXDQ9BXN6 97 aa7.65□□□□□ -1.18
SMAD3-213ENST00000560175 TRAV23DV6A0A075B6W5 121 aa7.64□□□□□ -1.19
SMAD3-213ENST00000560175 SNRPEP62304 92 aaKnown RBP7.64□□□□□ -1.19
SMAD3-213ENST00000560175 CBY1Q9Y3M2 126 aa7.64□□□□□ -1.19
SMAD3-213ENST00000560175 ZNF73O43830 326 aaPredicted RBP7.63□□□□□ -1.19
SMAD3-213ENST00000560175 LINC00518Q8N0U6 118 aa7.63□□□□□ -1.19
SMAD3-213ENST00000560175 C5orf52A6NGY3 159 aa7.62□□□□□ -1.19
SMAD3-213ENST00000560175 SPAG11AQ6PDA7 123 aa7.62□□□□□ -1.19
SMAD3-213ENST00000560175 Q6ZVH6 145 aa7.62□□□□□ -1.19
SMAD3-213ENST00000560175 ATOH7Q8N100 152 aa7.62□□□□□ -1.19
SMAD3-213ENST00000560175 IFITM1P13164 125 aa7.61□□□□□ -1.19
SMAD3-213ENST00000560175 JOSD1Q15040 202 aaPredicted RBP7.61□□□□□ -1.19
SMAD3-213ENST00000560175 PRR4Q16378 134 aa7.61□□□□□ -1.19
SMAD3-213ENST00000560175 PCP2Q8IVA1 136 aa7.61□□□□□ -1.19
SMAD3-213ENST00000560175 RNF213Q63HN8 5207 aa7.6□□□□□ -1.19
SMAD3-213ENST00000560175 S100A2P29034 98 aa7.59□□□□□ -1.19
SMAD3-213ENST00000560175 SCGB1D4Q6XE38 83 aa7.59□□□□□ -1.19
SMAD3-213ENST00000560175 GAGE2AQ6NT46 116 aa7.58□□□□□ -1.2
SMAD3-213ENST00000560175 SSBP3-AS1Q7Z2R9 100 aa7.58□□□□□ -1.2
SMAD3-213ENST00000560175 COPS9Q8WXC6 57 aa7.58□□□□□ -1.2
SMAD3-213ENST00000560175 S100A6P06703 90 aa7.57□□□□□ -1.2
SMAD3-213ENST00000560175 HINT1P49773 126 aaPredicted RBP7.57□□□□□ -1.2
SMAD3-213ENST00000560175 OR13C6PQ8NH95 151 aa7.57□□□□□ -1.2
SMAD3-213ENST00000560175 SPRR1BP22528 89 aa7.56□□□□□ -1.2
SMAD3-213ENST00000560175 MUSTN1Q8IVN3 82 aa7.56□□□□□ -1.2
SMAD3-213ENST00000560175 TRBV7-6A0A0J9YX20 115 aa7.55□□□□□ -1.2
SMAD3-213ENST00000560175 ELOF1P60002 83 aaKnown RBP7.55□□□□□ -1.2
SMAD3-213ENST00000560175 Q8NBF4 154 aa7.55□□□□□ -1.2
SMAD3-213ENST00000560175 SPINK1P00995 79 aa7.54□□□□□ -1.2
SMAD3-213ENST00000560175 DHRS4-AS1Q9P1J3 65 aa7.54□□□□□ -1.2
SMAD3-213ENST00000560175 RPS29P62273 56 aaKnown RBP7.53□□□□□ -1.2
SMAD3-213ENST00000560175 C6orf99Q4VX62 202 aa7.53□□□□□ -1.2
SMAD3-213ENST00000560175 ST20-AS1Q8NBB2 130 aa7.53□□□□□ -1.2
SMAD3-213ENST00000560175 RETNLBQ9BQ08 111 aa7.53□□□□□ -1.2
SMAD3-213ENST00000560175 TPRXLQ17RH7 258 aa7.52□□□□□ -1.21
SMAD3-213ENST00000560175 C4orf48Q5BLP8 95 aa7.52□□□□□ -1.21
SMAD3-213ENST00000560175 HSBP1L1C9JCN9 74 aa7.51□□□□□ -1.21
SMAD3-213ENST00000560175 COX7BP24311 80 aa7.51□□□□□ -1.21
SMAD3-213ENST00000560175 IGLV7-46A0A075B6I9 117 aa7.5□□□□□ -1.21
SMAD3-213ENST00000560175 IGLV9-49A0A0B4J1Y8 123 aa7.5□□□□□ -1.21
SMAD3-213ENST00000560175 MOBPQ13875 183 aa7.5□□□□□ -1.21
SMAD3-213ENST00000560175 FP248Q71RG6 208 aaPredicted RBP7.5□□□□□ -1.21
SMAD3-213ENST00000560175 TRAV13-2A0A0B4J235 113 aa7.49□□□□□ -1.21
SMAD3-213ENST00000560175 A0A1B0GWB2 263 aa7.49□□□□□ -1.21
SMAD3-213ENST00000560175 A6NDN8 102 aa7.48□□□□□ -1.21
SMAD3-213ENST00000560175 MUC17Q685J3 4493 aa7.48□□□□□ -1.21
SMAD3-213ENST00000560175 MUC2Q02817 5179 aa7.47□□□□□ -1.21
SMAD3-213ENST00000560175 DLEU1O43261 78 aa7.47□□□□□ -1.21
SMAD3-213ENST00000560175 SCGB1D1O95968 90 aa7.47□□□□□ -1.21
SMAD3-213ENST00000560175 Q8N377 158 aa7.47□□□□□ -1.21
SMAD3-213ENST00000560175 A4D1N5 150 aa7.46□□□□□ -1.22
SMAD3-213ENST00000560175 COX8AP10176 69 aa7.46□□□□□ -1.22
SMAD3-213ENST00000560175 SLC25A34Q6PIV7 304 aa7.46□□□□□ -1.22
SMAD3-213ENST00000560175 SMIM11BQ8TCY0 68 aa7.46□□□□□ -1.22
SMAD3-213ENST00000560175 IGLV5-48A0A075B6I7 105 aa7.45□□□□□ -1.22
SMAD3-213ENST00000560175 LINC01547P58512 204 aaPredicted RBP7.45□□□□□ -1.22
SMAD3-213ENST00000560175 TEX49A0A1B0GTD5 131 aa7.44□□□□□ -1.22
SMAD3-213ENST00000560175 SMIM29Q86T20 159 aa7.44□□□□□ -1.22
SMAD3-213ENST00000560175 LAMTOR3Q9UHA4 124 aa7.43□□□□□ -1.22
SMAD3-213ENST00000560175 SLC25A20O43772 301 aa7.42□□□□□ -1.22
SMAD3-213ENST00000560175 TAL2Q16559 108 aa7.42□□□□□ -1.22
SMAD3-213ENST00000560175 KRTAP13-3Q3SY46 172 aa7.42□□□□□ -1.22
SMAD3-213ENST00000560175 C9orf153Q5TBE3 101 aa7.42□□□□□ -1.22
SMAD3-213ENST00000560175 CDIP1Q9H305 208 aa7.41□□□□□ -1.22
SMAD3-213ENST00000560175 CD164Q04900 197 aa7.4□□□□□ -1.22
SMAD3-213ENST00000560175 NHP2Q9NX24 153 aaKnown RBP7.4□□□□□ -1.22
SMAD3-213ENST00000560175 HIGD1BQ9P298 99 aa7.4□□□□□ -1.22
SMAD3-213ENST00000560175 LINC00575Q6W349 94 aa7.39□□□□□ -1.23
SMAD3-213ENST00000560175 DEFB105AQ8NG35 78 aa7.39□□□□□ -1.23
SMAD3-213ENST00000560175 VAMP3Q15836 100 aa7.38□□□□□ -1.23
SMAD3-213ENST00000560175 HIST1H4GQ99525 98 aa7.38□□□□□ -1.23
SMAD3-213ENST00000560175 Q1RN00 199 aa7.37□□□□□ -1.23
SMAD3-213ENST00000560175 SPATA45Q537H7 98 aa7.37□□□□□ -1.23
SMAD3-213ENST00000560175 C14orf144Q96I85 54 aa7.37□□□□□ -1.23
SMAD3-213ENST00000560175 PRO1933Q9H354 126 aa7.37□□□□□ -1.23
SMAD3-213ENST00000560175 Q5XG85 94 aa7.36□□□□□ -1.23
SMAD3-213ENST00000560175 C2orf91Q6ZV80 131 aa7.36□□□□□ -1.23
SMAD3-213ENST00000560175 PAM16Q9Y3D7 125 aa7.36□□□□□ -1.23
SMAD3-213ENST00000560175 CFC1BP0CG36 223 aa7.35□□□□□ -1.23
SMAD3-213ENST00000560175 CFC1P0CG37 223 aa7.35□□□□□ -1.23
SMAD3-213ENST00000560175 VAMP8Q9BV40 100 aa7.34□□□□□ -1.23
SMAD3-213ENST00000560175 hADV29S1A0JD25 119 aa7.33□□□□□ -1.24
SMAD3-213ENST00000560175 LIMD2Q9BT23 127 aa7.33□□□□□ -1.24
SMAD3-213ENST00000560175 ASB16-AS1Q495Z4 193 aa7.32□□□□□ -1.24
SMAD3-213ENST00000560175 BVES-AS1Q5T3Y7 98 aa7.32□□□□□ -1.24
SMAD3-213ENST00000560175 C12orf57Q99622 126 aa7.32□□□□□ -1.24
SMAD3-213ENST00000560175 IGLV8-61A0A075B6I0 122 aa7.31□□□□□ -1.24
SMAD3-213ENST00000560175 A0A0B4J2C4 111 aa7.31□□□□□ -1.24
SMAD3-213ENST00000560175 PYY3Q5JQD4 70 aa7.31□□□□□ -1.24
SMAD3-213ENST00000560175 Q6ZQY7 126 aa7.31□□□□□ -1.24
SMAD3-213ENST00000560175 H7C2G1 150 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms