RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 A8MUN3 132 aa3.42□□□□□ -1.86
LRRC49-221ENST00000560107 COX7BP24311 80 aa3.42□□□□□ -1.86
LRRC49-221ENST00000560107 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.42□□□□□ -1.86
LRRC49-221ENST00000560107 ELOF1P60002 83 aaKnown RBP3.42□□□□□ -1.86
LRRC49-221ENST00000560107 Q8N9L7 120 aa3.42□□□□□ -1.86
LRRC49-221ENST00000560107 GVQW2A0A096LPI5 108 aaPredicted RBP3.42□□□□□ -1.86
LRRC49-221ENST00000560107 H3BQ85 93 aa3.42□□□□□ -1.86
LRRC49-221ENST00000560107 NDUFS5O43920 106 aa3.42□□□□□ -1.86
LRRC49-221ENST00000560107 LELP1Q5T871 98 aa3.42□□□□□ -1.86
LRRC49-221ENST00000560107 PRR34Q9NV39 138 aa3.42□□□□□ -1.86
LRRC49-221ENST00000560107 NREPQ16612 68 aa3.41□□□□□ -1.86
LRRC49-221ENST00000560107 HIGD2BQ4VC39 106 aa3.41□□□□□ -1.86
LRRC49-221ENST00000560107 LINC00588Q9Y4M8 146 aa3.41□□□□□ -1.86
LRRC49-221ENST00000560107 PDZD2O15018 2839 aa3.41□□□□□ -1.86
LRRC49-221ENST00000560107 BPY2O14599 106 aa3.4□□□□□ -1.86
LRRC49-221ENST00000560107 MIFP14174 115 aa3.4□□□□□ -1.86
LRRC49-221ENST00000560107 Q8NAQ8 132 aa3.4□□□□□ -1.86
LRRC49-221ENST00000560107 HIVEP2P31629 2446 aa3.4□□□□□ -1.87
LRRC49-221ENST00000560107 LORP23490 312 aaPredicted RBP3.4□□□□□ -1.87
LRRC49-221ENST00000560107 CAMK2N2Q96S95 79 aa3.4□□□□□ -1.87
LRRC49-221ENST00000560107 TENM4Q6N022 2769 aa3.39□□□□□ -1.87
LRRC49-221ENST00000560107 PRYO14603 147 aa3.39□□□□□ -1.87
LRRC49-221ENST00000560107 NDUFC1O43677 76 aa3.39□□□□□ -1.87
LRRC49-221ENST00000560107 LINC00528Q8N1L1 170 aa3.39□□□□□ -1.87
LRRC49-221ENST00000560107 TMEM254Q8TBM7 123 aa3.39□□□□□ -1.87
LRRC49-221ENST00000560107 J3QL48 77 aa3.39□□□□□ -1.87
LRRC49-221ENST00000560107 IGKV4-1P06312 121 aa3.39□□□□□ -1.87
LRRC49-221ENST00000560107 SPART-AS1P0CW21 52 aa3.39□□□□□ -1.87
LRRC49-221ENST00000560107 LCA10Q71F78 164 aa3.39□□□□□ -1.87
LRRC49-221ENST00000560107 ITPR2Q14571 2701 aa3.39□□□□□ -1.87
LRRC49-221ENST00000560107 HIVEP1P15822 2718 aa3.38□□□□□ -1.87
LRRC49-221ENST00000560107 C3orf84H3BNL1 204 aa3.38□□□□□ -1.87
LRRC49-221ENST00000560107 TRRAPQ9Y4A5 3859 aa3.38□□□□□ -1.87
LRRC49-221ENST00000560107 LCE3BQ5TA77 95 aa3.38□□□□□ -1.87
LRRC49-221ENST00000560107 WFDC10BQ8IUB3 73 aa3.38□□□□□ -1.87
LRRC49-221ENST00000560107 DEFB105AQ8NG35 78 aa3.38□□□□□ -1.87
LRRC49-221ENST00000560107 SMR3AQ99954 134 aa3.38□□□□□ -1.87
LRRC49-221ENST00000560107 TENM1Q9UKZ4 2725 aa3.38□□□□□ -1.87
LRRC49-221ENST00000560107 LINC00313P59037 77 aa3.37□□□□□ -1.87
LRRC49-221ENST00000560107 EGFEM1PQ0D2K5 195 aa3.37□□□□□ -1.87
LRRC49-221ENST00000560107 FAM229BQ4G0N7 80 aa3.37□□□□□ -1.87
LRRC49-221ENST00000560107 PHF5AQ7RTV0 110 aaKnown RBP3.37□□□□□ -1.87
LRRC49-221ENST00000560107 OCR1Q9BZK8 76 aa3.37□□□□□ -1.87
LRRC49-221ENST00000560107 KRTAP26-1Q6PEX3 210 aa3.37□□□□□ -1.87
LRRC49-221ENST00000560107 Q6ZRP5 223 aa3.37□□□□□ -1.87
LRRC49-221ENST00000560107 C15orf56Q8N910 161 aa3.37□□□□□ -1.87
LRRC49-221ENST00000560107 ERC2-IT1O76042 136 aa3.36□□□□□ -1.87
LRRC49-221ENST00000560107 ATP5EP56381 51 aaPredicted RBP3.36□□□□□ -1.87
LRRC49-221ENST00000560107 UNC79Q9P2D8 2635 aa3.36□□□□□ -1.87
LRRC49-221ENST00000560107 PKD1L1Q8TDX9 2849 aa3.36□□□□□ -1.87
LRRC49-221ENST00000560107 HIGD2AQ9BW72 106 aa3.36□□□□□ -1.87
LRRC49-221ENST00000560107 KRTAP4-8A0A0G2JLE6 195 aa3.35□□□□□ -1.87
LRRC49-221ENST00000560107 FUSP35637 526 aaKnown RBP eCLIP3.35□□□□□ -1.87
LRRC49-221ENST00000560107 Q8N377 158 aa3.35□□□□□ -1.87
LRRC49-221ENST00000560107 MP68P56378 58 aa3.35□□□□□ -1.87
LRRC49-221ENST00000560107 KPRPQ5T749 579 aaPredicted RBP3.35□□□□□ -1.87
LRRC49-221ENST00000560107 LCE2CQ5TA81 110 aa3.35□□□□□ -1.87
LRRC49-221ENST00000560107 Q6ZTC4 211 aa3.35□□□□□ -1.87
LRRC49-221ENST00000560107 FAM30AQ9NZY2 134 aa3.35□□□□□ -1.87
LRRC49-221ENST00000560107 UBE2BP63146 152 aa3.34□□□□□ -1.87
LRRC49-221ENST00000560107 SMIM29Q86T20 159 aa3.34□□□□□ -1.87
LRRC49-221ENST00000560107 NKAPP1Q8N9T2 125 aa3.34□□□□□ -1.87
LRRC49-221ENST00000560107 C7orf33Q8WU49 177 aa3.34□□□□□ -1.87
LRRC49-221ENST00000560107 IGLV5-48A0A075B6I7 105 aa3.34□□□□□ -1.88
LRRC49-221ENST00000560107 H0Y9J4 135 aa3.34□□□□□ -1.88
LRRC49-221ENST00000560107 C7orf65Q6ZTY9 151 aa3.34□□□□□ -1.88
LRRC49-221ENST00000560107 KCNQ1DNQ9H478 68 aa3.34□□□□□ -1.88
LRRC49-221ENST00000560107 IGKV2D-24A0A075B6R9 120 aa3.33□□□□□ -1.88
LRRC49-221ENST00000560107 A0A1W2PNM2 257 aa3.33□□□□□ -1.88
LRRC49-221ENST00000560107 RPL37AP8A6NKH3 93 aa3.33□□□□□ -1.88
LRRC49-221ENST00000560107 ESRGQ1W209 222 aa3.33□□□□□ -1.88
LRRC49-221ENST00000560107 ANK2Q01484 3957 aa3.33□□□□□ -1.88
LRRC49-221ENST00000560107 DNAH1Q9P2D7 4330 aa3.33□□□□□ -1.88
LRRC49-221ENST00000560107 SYCNQ0VAF6 134 aa3.33□□□□□ -1.88
LRRC49-221ENST00000560107 ST20-AS1Q8NBB2 130 aa3.33□□□□□ -1.88
LRRC49-221ENST00000560107 ZNF706Q9Y5V0 76 aaPredicted RBP3.33□□□□□ -1.88
LRRC49-221ENST00000560107 NOTCH2Q04721 2471 aa3.33□□□□□ -1.88
LRRC49-221ENST00000560107 ATRQ13535 2644 aa3.32□□□□□ -1.88
LRRC49-221ENST00000560107 Q9BRP9 147 aa3.32□□□□□ -1.88
LRRC49-221ENST00000560107 FASNP49327 2511 aaKnown RBP3.32□□□□□ -1.88
LRRC49-221ENST00000560107 TEP1Q99973 2627 aaKnown RBP3.32□□□□□ -1.88
LRRC49-221ENST00000560107 FAM168BA1KXE4 195 aa3.32□□□□□ -1.88
LRRC49-221ENST00000560107 LINC01554Q52M75 96 aa3.31□□□□□ -1.88
LRRC49-221ENST00000560107 C1orf137Q5JT78 98 aa3.31□□□□□ -1.88
LRRC49-221ENST00000560107 Q6ZRX8 168 aa3.31□□□□□ -1.88
LRRC49-221ENST00000560107 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
LRRC49-221ENST00000560107 LRCOL1A6NCL2 159 aa3.31□□□□□ -1.88
LRRC49-221ENST00000560107 A6NN06 94 aa3.31□□□□□ -1.88
LRRC49-221ENST00000560107 A8MU10 97 aa3.31□□□□□ -1.88
LRRC49-221ENST00000560107 H3BNG1 76 aa3.31□□□□□ -1.88
LRRC49-221ENST00000560107 DSCR10P59022 87 aa3.31□□□□□ -1.88
LRRC49-221ENST00000560107 DHRS4-AS1Q9P1J3 65 aa3.31□□□□□ -1.88
LRRC49-221ENST00000560107 HELZ2Q9BYK8 2649 aaKnown RBP3.3□□□□□ -1.88
LRRC49-221ENST00000560107 KRTAP4-16G5E9R7 235 aaPredicted RBP3.3□□□□□ -1.88
LRRC49-221ENST00000560107 TNP2Q05952 138 aa3.3□□□□□ -1.88
LRRC49-221ENST00000560107 Q1T7F1 81 aa3.3□□□□□ -1.88
LRRC49-221ENST00000560107 Q8NBF4 154 aa3.3□□□□□ -1.88
LRRC49-221ENST00000560107 SPTSSBQ8NFR3 76 aa3.3□□□□□ -1.88
LRRC49-221ENST00000560107 OTOGQ6ZRI0 2925 aa3.3□□□□□ -1.88
LRRC49-221ENST00000560107 IGLV1-50A0A075B6I6 118 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms