RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 XAGE1AQ9HD64 81 aa12.92□□□□□ -0.34
PSEN1-225ENST00000560005 CBY1Q9Y3M2 126 aa12.92□□□□□ -0.34
PSEN1-225ENST00000560005 H7C2G1 150 aa12.91□□□□□ -0.34
PSEN1-225ENST00000560005 GTF2H5Q6ZYL4 71 aa12.91□□□□□ -0.34
PSEN1-225ENST00000560005 OR13C6PQ8NH95 151 aa12.91□□□□□ -0.34
PSEN1-225ENST00000560005 SCGB1C2P0DMR2 95 aa12.9□□□□□ -0.34
PSEN1-225ENST00000560005 LINC00337Q8N6G1 96 aa12.9□□□□□ -0.34
PSEN1-225ENST00000560005 SDIM1Q6ZPB5 146 aa12.89□□□□□ -0.35
PSEN1-225ENST00000560005 S100A7L2Q5SY68 101 aa12.88□□□□□ -0.35
PSEN1-225ENST00000560005 NAA38Q9BRA0 125 aaKnown RBP12.88□□□□□ -0.35
PSEN1-225ENST00000560005 TRBV20-1A0A075B6N2 111 aa12.87□□□□□ -0.35
PSEN1-225ENST00000560005 GAGE10A6NGK3 116 aa12.87□□□□□ -0.35
PSEN1-225ENST00000560005 M0R378 163 aa12.87□□□□□ -0.35
PSEN1-225ENST00000560005 GAGE2BQ13066 116 aa12.87□□□□□ -0.35
PSEN1-225ENST00000560005 VPREB1P12018 145 aa12.86□□□□□ -0.35
PSEN1-225ENST00000560005 RPL28P46779 137 aaKnown RBP12.86□□□□□ -0.35
PSEN1-225ENST00000560005 LINC00474Q9P2X8 69 aa12.86□□□□□ -0.35
PSEN1-225ENST00000560005 SPCS1Q9Y6A9 102 aa12.86□□□□□ -0.35
PSEN1-225ENST00000560005 C9orf129Q5T035 196 aaKnown RBP12.85□□□□□ -0.35
PSEN1-225ENST00000560005 NKAPP1Q8N9T2 125 aa12.84□□□□□ -0.35
PSEN1-225ENST00000560005 K7EP34 96 aa12.83□□□□□ -0.36
PSEN1-225ENST00000560005 NCR3O14931 201 aa12.83□□□□□ -0.36
PSEN1-225ENST00000560005 PRR3P79522 188 aaKnown RBP12.83□□□□□ -0.36
PSEN1-225ENST00000560005 LINC01600Q96MT4 127 aa12.83□□□□□ -0.36
PSEN1-225ENST00000560005 IGLV5-37A0A075B6J1 123 aa12.82□□□□□ -0.36
PSEN1-225ENST00000560005 TRIAP1O43715 76 aa12.82□□□□□ -0.36
PSEN1-225ENST00000560005 UBE2V1Q13404 147 aa12.82□□□□□ -0.36
PSEN1-225ENST00000560005 DPH3Q96FX2 82 aa12.82□□□□□ -0.36
PSEN1-225ENST00000560005 H0YGX0 51 aa12.81□□□□□ -0.36
PSEN1-225ENST00000560005 IGLV6-57P01721 117 aa12.81□□□□□ -0.36
PSEN1-225ENST00000560005 A0A087WYN8 130 aa12.8□□□□□ -0.36
PSEN1-225ENST00000560005 CHTF8P0CG12 524 aa12.8□□□□□ -0.36
PSEN1-225ENST00000560005 Q8NDZ9 215 aa12.8□□□□□ -0.36
PSEN1-225ENST00000560005 SMIM11BQ8TCY0 68 aa12.8□□□□□ -0.36
PSEN1-225ENST00000560005 LPAP08519 4548 aa12.78□□□□□ -0.36
PSEN1-225ENST00000560005 A0A096LNI7 61 aa12.77□□□□□ -0.37
PSEN1-225ENST00000560005 ATXN8Q156A1 80 aa12.77□□□□□ -0.37
PSEN1-225ENST00000560005 SPACA4Q8TDM5 124 aa12.76□□□□□ -0.37
PSEN1-225ENST00000560005 TRBV10-3A0A0K0K1G6 114 aa12.75□□□□□ -0.37
PSEN1-225ENST00000560005 SNCGO76070 127 aa12.75□□□□□ -0.37
PSEN1-225ENST00000560005 C7orf33Q8WU49 177 aa12.75□□□□□ -0.37
PSEN1-225ENST00000560005 IGKV2-24A0A0C4DH68 120 aa12.74□□□□□ -0.37
PSEN1-225ENST00000560005 TRAV23DV6A0A075B6W5 121 aa12.73□□□□□ -0.37
PSEN1-225ENST00000560005 TCL1BO95988 128 aa12.73□□□□□ -0.37
PSEN1-225ENST00000560005 PLAC8Q9NZF1 115 aa12.73□□□□□ -0.37
PSEN1-225ENST00000560005 C22orf24Q9Y442 160 aa12.72□□□□□ -0.37
PSEN1-225ENST00000560005 TRBV7-6A0A0J9YX20 115 aa12.71□□□□□ -0.37
PSEN1-225ENST00000560005 KRTAP10-8P60410 259 aa12.71□□□□□ -0.37
PSEN1-225ENST00000560005 MRPL55Q7Z7F7 128 aaKnown RBP12.71□□□□□ -0.37
PSEN1-225ENST00000560005 A0A1B0GX51 115 aa12.7□□□□□ -0.38
PSEN1-225ENST00000560005 LST1O00453 97 aa12.7□□□□□ -0.38
PSEN1-225ENST00000560005 FAM19A5Q7Z5A7 132 aaPredicted RBP12.7□□□□□ -0.38
PSEN1-225ENST00000560005 DIRC1Q969H9 104 aa12.7□□□□□ -0.38
PSEN1-225ENST00000560005 H3BMG7 143 aa12.69□□□□□ -0.38
PSEN1-225ENST00000560005 KCNQ1DNQ9H478 68 aa12.69□□□□□ -0.38
PSEN1-225ENST00000560005 FAM168BA1KXE4 195 aa12.68□□□□□ -0.38
PSEN1-225ENST00000560005 F8W1H4 67 aa12.68□□□□□ -0.38
PSEN1-225ENST00000560005 ZNF73O43830 326 aaPredicted RBP12.68□□□□□ -0.38
PSEN1-225ENST00000560005 TRACP01848 142 aa12.68□□□□□ -0.38
PSEN1-225ENST00000560005 C6orf99Q4VX62 202 aa12.68□□□□□ -0.38
PSEN1-225ENST00000560005 PRYO14603 147 aa12.67□□□□□ -0.38
PSEN1-225ENST00000560005 LINC00167Q96N53 147 aa12.67□□□□□ -0.38
PSEN1-225ENST00000560005 IGLV1-50A0A075B6I6 118 aa12.66□□□□□ -0.38
PSEN1-225ENST00000560005 M0QXV9 152 aa12.66□□□□□ -0.38
PSEN1-225ENST00000560005 CLEC2BQ92478 149 aa12.66□□□□□ -0.38
PSEN1-225ENST00000560005 A0A1W2PNN7 141 aa12.64□□□□□ -0.39
PSEN1-225ENST00000560005 REG3GQ6UW15 175 aa12.64□□□□□ -0.39
PSEN1-225ENST00000560005 KRTAP7-1Q8IUC3 87 aa12.64□□□□□ -0.39
PSEN1-225ENST00000560005 MUC2Q02817 5179 aa12.64□□□□□ -0.39
PSEN1-225ENST00000560005 SLC25A20O43772 301 aa12.63□□□□□ -0.39
PSEN1-225ENST00000560005 DNAL4O96015 105 aa12.63□□□□□ -0.39
PSEN1-225ENST00000560005 COX7BP24311 80 aa12.63□□□□□ -0.39
PSEN1-225ENST00000560005 SPINK6Q6UWN8 80 aa12.62□□□□□ -0.39
PSEN1-225ENST00000560005 C9JAW5 83 aa12.6□□□□□ -0.39
PSEN1-225ENST00000560005 KRTAP9-2Q9BYQ4 174 aa12.6□□□□□ -0.39
PSEN1-225ENST00000560005 RPL37AP8A6NKH3 93 aa12.59□□□□□ -0.39
PSEN1-225ENST00000560005 GHRHP01286 108 aa12.59□□□□□ -0.39
PSEN1-225ENST00000560005 ELOF1P60002 83 aaKnown RBP12.59□□□□□ -0.39
PSEN1-225ENST00000560005 LINC00575Q6W349 94 aa12.59□□□□□ -0.39
PSEN1-225ENST00000560005 H3BQ85 93 aa12.58□□□□□ -0.4
PSEN1-225ENST00000560005 ETDCA0A1B0GVM5 59 aa12.57□□□□□ -0.4
PSEN1-225ENST00000560005 hADV29S1A0JD25 119 aa12.57□□□□□ -0.4
PSEN1-225ENST00000560005 H3BT86 120 aa12.57□□□□□ -0.4
PSEN1-225ENST00000560005 SPRR1AP35321 89 aa12.57□□□□□ -0.4
PSEN1-225ENST00000560005 UBE2BP63146 152 aa12.57□□□□□ -0.4
PSEN1-225ENST00000560005 FAM218AQ96MZ4 157 aa12.57□□□□□ -0.4
PSEN1-225ENST00000560005 PRO0461Q9UI25 63 aa12.56□□□□□ -0.4
PSEN1-225ENST00000560005 ANKRD29Q8N6D5 301 aa12.54□□□□□ -0.4
PSEN1-225ENST00000560005 OCIAD2Q56VL3 154 aa12.53□□□□□ -0.4
PSEN1-225ENST00000560005 PHF5AQ7RTV0 110 aaKnown RBP12.53□□□□□ -0.4
PSEN1-225ENST00000560005 DHRS4-AS1Q9P1J3 65 aa12.53□□□□□ -0.4
PSEN1-225ENST00000560005 ORMDL1Q9P0S3 153 aa12.52□□□□□ -0.41
PSEN1-225ENST00000560005 KRTAP4-16G5E9R7 235 aaPredicted RBP12.51□□□□□ -0.41
PSEN1-225ENST00000560005 BAALC-AS2P0C853 105 aa12.51□□□□□ -0.41
PSEN1-225ENST00000560005 B5MCH6 92 aa12.5□□□□□ -0.41
PSEN1-225ENST00000560005 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.5□□□□□ -0.41
PSEN1-225ENST00000560005 Q6ZRX8 168 aa12.5□□□□□ -0.41
PSEN1-225ENST00000560005 TMEM256-PLSCR3K7ERE1 68 aa12.47□□□□□ -0.41
PSEN1-225ENST00000560005 SMCPP49901 116 aaPredicted RBP12.47□□□□□ -0.41
PSEN1-225ENST00000560005 MTURNQ8N3F0 131 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms